RNA–Protein interactions for RNA: ENST00000522880.1

SFTPC-208, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-208ENST00000522880 USP44Q9H0E7 712 aa18.62■□□□□ 0.57
SFTPC-208ENST00000522880 WWC3Q9ULE0 1092 aa18.62■□□□□ 0.57
SFTPC-208ENST00000522880 N4BP2Q86UW6 1770 aaPredicted RBP18.62■□□□□ 0.57
SFTPC-208ENST00000522880 DLEC1Q9Y238 1755 aa18.61■□□□□ 0.57
SFTPC-208ENST00000522880 COL11A2P13942 1736 aaPredicted RBP18.61■□□□□ 0.57
SFTPC-208ENST00000522880 GRIN3BO60391 1043 aa18.61■□□□□ 0.57
SFTPC-208ENST00000522880 NBPF7P0C2Y1 421 aaPredicted RBP18.61■□□□□ 0.57
SFTPC-208ENST00000522880 PRPF40BQ6NWY9 871 aaKnown RBP18.61■□□□□ 0.57
SFTPC-208ENST00000522880 TMEM57Q8N5G2 664 aa18.61■□□□□ 0.57
SFTPC-208ENST00000522880 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
SFTPC-208ENST00000522880 LAMB2P55268 1798 aa18.6■□□□□ 0.57
SFTPC-208ENST00000522880 UBTFL1P0CB47 393 aaPredicted RBP18.6■□□□□ 0.57
SFTPC-208ENST00000522880 YBX3P16989 372 aaKnown RBP eCLIP18.6■□□□□ 0.57
SFTPC-208ENST00000522880 GRAPQ13588 217 aa18.6■□□□□ 0.57
SFTPC-208ENST00000522880 TTLL11Q8NHH1 800 aa18.6■□□□□ 0.57
SFTPC-208ENST00000522880 GRAPLQ8TC17 118 aaPredicted RBP18.6■□□□□ 0.57
SFTPC-208ENST00000522880 DDX60Q8IY21 1712 aaKnown RBP18.6■□□□□ 0.57
SFTPC-208ENST00000522880 RTL9Q8NET4 1388 aa18.59■□□□□ 0.57
SFTPC-208ENST00000522880 BBOX1O75936 387 aa18.59■□□□□ 0.57
SFTPC-208ENST00000522880 GNAI3P08754 354 aa18.59■□□□□ 0.57
SFTPC-208ENST00000522880 SOGA3Q5TF21 947 aa18.59■□□□□ 0.57
SFTPC-208ENST00000522880 ITPRIPQ8IWB1 547 aa18.59■□□□□ 0.57
SFTPC-208ENST00000522880 CSF1RP07333 972 aa18.58■□□□□ 0.56
SFTPC-208ENST00000522880 RLBP1P12271 317 aa18.58■□□□□ 0.56
SFTPC-208ENST00000522880 FOXO4P98177 505 aa18.58■□□□□ 0.56
SFTPC-208ENST00000522880 PDE3AQ14432 1141 aa18.58■□□□□ 0.56
SFTPC-208ENST00000522880 TMC4Q7Z404 712 aa18.58■□□□□ 0.56
SFTPC-208ENST00000522880 SUCLG2Q96I99 432 aa18.58■□□□□ 0.56
SFTPC-208ENST00000522880 TMX4Q9H1E5 349 aaPredicted RBP18.58■□□□□ 0.56
SFTPC-208ENST00000522880 BRCA1P38398 1863 aaKnown RBP18.57■□□□□ 0.56
SFTPC-208ENST00000522880 PPEF1O14829 653 aaPredicted RBP18.57■□□□□ 0.56
SFTPC-208ENST00000522880 PLIN1O60240 522 aa18.57■□□□□ 0.56
SFTPC-208ENST00000522880 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
SFTPC-208ENST00000522880 MEIS3Q99687 375 aa18.57■□□□□ 0.56
SFTPC-208ENST00000522880 RRP1P56182 461 aaKnown RBP18.56■□□□□ 0.56
SFTPC-208ENST00000522880 CC2D2BQ6DHV5 1058 aa18.56■□□□□ 0.56
SFTPC-208ENST00000522880 LMBR1LQ6UX01 489 aa18.56■□□□□ 0.56
SFTPC-208ENST00000522880 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
SFTPC-208ENST00000522880 CCDC85AQ96PX6 553 aaPredicted RBP18.56■□□□□ 0.56
SFTPC-208ENST00000522880 GREM2Q9H772 168 aa18.56■□□□□ 0.56
SFTPC-208ENST00000522880 C21orf2O43822 256 aa18.55■□□□□ 0.56
SFTPC-208ENST00000522880 RPS8P62241 208 aaKnown RBP18.55■□□□□ 0.56
SFTPC-208ENST00000522880 IFIT5Q13325 482 aaKnown RBP18.55■□□□□ 0.56
SFTPC-208ENST00000522880 FAM161AQ3B820 660 aa18.55■□□□□ 0.56
SFTPC-208ENST00000522880 RABL6Q3YEC7 729 aaPredicted RBP18.55■□□□□ 0.56
SFTPC-208ENST00000522880 GRIPAP1Q4V328 841 aa18.55■□□□□ 0.56
SFTPC-208ENST00000522880 EPHA10Q5JZY3 1008 aa18.55■□□□□ 0.56
SFTPC-208ENST00000522880 C7orf43Q8WVR3 580 aa18.55■□□□□ 0.56
SFTPC-208ENST00000522880 KAZALD1Q96I82 304 aa18.55■□□□□ 0.56
SFTPC-208ENST00000522880 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
SFTPC-208ENST00000522880 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
SFTPC-208ENST00000522880 CHMP3Q9Y3E7 222 aa18.55■□□□□ 0.56
SFTPC-208ENST00000522880 ANKRD18BA2A2Z9 1011 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 ITGA6P23229 1130 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 MVPQ14764 893 aaKnown RBP18.54■□□□□ 0.56
SFTPC-208ENST00000522880 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 CCDC93Q567U6 631 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 ANKRD18AQ8IVF6 992 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 CELF1Q92879 486 aaKnown RBP18.54■□□□□ 0.56
SFTPC-208ENST00000522880 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 ATP6V0A2Q9Y487 856 aa18.54■□□□□ 0.56
SFTPC-208ENST00000522880 GNAI2P04899 355 aa18.53■□□□□ 0.56
SFTPC-208ENST00000522880 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
SFTPC-208ENST00000522880 ZNF219Q9P2Y4 722 aaPredicted RBP18.53■□□□□ 0.56
SFTPC-208ENST00000522880 ZBTB7BO15156 539 aaPredicted RBP18.52■□□□□ 0.56
SFTPC-208ENST00000522880 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.56
SFTPC-208ENST00000522880 ARHGAP27Q6ZUM4 889 aa18.52■□□□□ 0.56
SFTPC-208ENST00000522880 SP8Q8IXZ3 490 aa18.52■□□□□ 0.56
SFTPC-208ENST00000522880 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.56
SFTPC-208ENST00000522880 COG6Q9Y2V7 657 aa18.52■□□□□ 0.56
SFTPC-208ENST00000522880 LRRFIP2Q9Y608 721 aaKnown RBP18.52■□□□□ 0.56
SFTPC-208ENST00000522880 ARFGEF1Q9Y6D6 1849 aa18.51■□□□□ 0.55
SFTPC-208ENST00000522880 TAF7LQ5H9L4 462 aa18.51■□□□□ 0.55
SFTPC-208ENST00000522880 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
SFTPC-208ENST00000522880 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
SFTPC-208ENST00000522880 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
SFTPC-208ENST00000522880 BSDC1Q9NW68 430 aaPredicted RBP18.5■□□□□ 0.55
SFTPC-208ENST00000522880 MYH3P11055 1940 aa18.5■□□□□ 0.55
SFTPC-208ENST00000522880 TAOK3Q9H2K8 898 aa18.49■□□□□ 0.55
SFTPC-208ENST00000522880 LTBP3Q9NS15 1303 aa18.49■□□□□ 0.55
SFTPC-208ENST00000522880 NFKBIEO00221 500 aa18.47■□□□□ 0.55
SFTPC-208ENST00000522880 FKBP4Q02790 459 aaKnown RBP eCLIP18.47■□□□□ 0.55
SFTPC-208ENST00000522880 MTX1Q13505 466 aa18.47■□□□□ 0.55
SFTPC-208ENST00000522880 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
SFTPC-208ENST00000522880 DPP8Q6V1X1 898 aaPredicted RBP18.47■□□□□ 0.55
SFTPC-208ENST00000522880 PSMD1Q99460 953 aa18.47■□□□□ 0.55
SFTPC-208ENST00000522880 MPNDQ8N594 471 aa18.46■□□□□ 0.55
SFTPC-208ENST00000522880 SUPT20HQ8NEM7 779 aa18.46■□□□□ 0.55
SFTPC-208ENST00000522880 SUPT16HQ9Y5B9 1047 aaKnown RBP18.46■□□□□ 0.55
SFTPC-208ENST00000522880 SNED1Q8TER0 1413 aa18.46■□□□□ 0.55
SFTPC-208ENST00000522880 SRGAP3O43295 1099 aa18.45■□□□□ 0.54
SFTPC-208ENST00000522880 LDHAL6AQ6ZMR3 332 aa18.45■□□□□ 0.54
SFTPC-208ENST00000522880 ZNF526Q8TF50 670 aaPredicted RBP18.45■□□□□ 0.54
SFTPC-208ENST00000522880 ZBTB40Q9NUA8 1239 aa18.45■□□□□ 0.54
SFTPC-208ENST00000522880 MINPP1Q9UNW1 487 aa18.45■□□□□ 0.54
SFTPC-208ENST00000522880 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
SFTPC-208ENST00000522880 CACNA1SQ13698 1873 aa18.45■□□□□ 0.54
SFTPC-208ENST00000522880 LMNB1P20700 586 aa18.44■□□□□ 0.54
SFTPC-208ENST00000522880 RASSF7Q02833 373 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms