RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 THBS1P07996 1170 aa10.07□□□□□ -0.8
PVT1-214ENST00000522875 BRD2P25440 801 aaKnown RBP10.07□□□□□ -0.8
PVT1-214ENST00000522875 LRRC69Q6ZNQ3 347 aa10.07□□□□□ -0.8
PVT1-214ENST00000522875 ETFBKMTQ8IXQ9 262 aa10.07□□□□□ -0.8
PVT1-214ENST00000522875 IFT43Q96FT9 208 aa10.07□□□□□ -0.8
PVT1-214ENST00000522875 CRISPLD1Q9H336 500 aa10.07□□□□□ -0.8
PVT1-214ENST00000522875 BIN2Q9UBW5 565 aaPredicted RBP10.07□□□□□ -0.8
PVT1-214ENST00000522875 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
PVT1-214ENST00000522875 RRBP1Q9P2E9 1410 aaKnown RBP10.07□□□□□ -0.8
PVT1-214ENST00000522875 NPR3P17342 541 aa10.06□□□□□ -0.8
PVT1-214ENST00000522875 HNRNPMP52272 730 aaKnown RBP eCLIP10.06□□□□□ -0.85e-7■■■■■ 33.6
PVT1-214ENST00000522875 PGBD3Q8N328 593 aa10.06□□□□□ -0.8
PVT1-214ENST00000522875 ARHGAP4P98171 946 aa10.05□□□□□ -0.8
PVT1-214ENST00000522875 ATCAYQ86WG3 371 aa10.05□□□□□ -0.8
PVT1-214ENST00000522875 GPC6Q9Y625 555 aaPredicted RBP10.05□□□□□ -0.8
PVT1-214ENST00000522875 FANCAO15360 1455 aa10.04□□□□□ -0.8
PVT1-214ENST00000522875 CAMSAP2Q08AD1 1489 aa10.04□□□□□ -0.8
PVT1-214ENST00000522875 MAP3K4Q9Y6R4 1608 aa10.04□□□□□ -0.8
PVT1-214ENST00000522875 FAM13AO94988 1023 aa10.04□□□□□ -0.8
PVT1-214ENST00000522875 DBN1Q16643 649 aa10.04□□□□□ -0.8
PVT1-214ENST00000522875 TREML1Q86YW5 311 aa10.04□□□□□ -0.8
PVT1-214ENST00000522875 NEUROD4Q9HD90 331 aa10.04□□□□□ -0.8
PVT1-214ENST00000522875 TGFBR3LH3BV60 316 aa10.03□□□□□ -0.8
PVT1-214ENST00000522875 ITGA6P23229 1130 aa10.03□□□□□ -0.8
PVT1-214ENST00000522875 EIF1AXP47813 144 aaKnown RBP10.03□□□□□ -0.8
PVT1-214ENST00000522875 TMCO4Q5TGY1 634 aa10.03□□□□□ -0.8
PVT1-214ENST00000522875 AKNAQ7Z591 1439 aa10.03□□□□□ -0.8
PVT1-214ENST00000522875 SAMD9LQ8IVG5 1584 aa10.03□□□□□ -0.8
PVT1-214ENST00000522875 ANKIB1Q9P2G1 1089 aa10.03□□□□□ -0.8
PVT1-214ENST00000522875 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
PVT1-214ENST00000522875 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
PVT1-214ENST00000522875 TCOF1Q13428 1488 aaKnown RBP10.03□□□□□ -0.8
PVT1-214ENST00000522875 PPRC1Q5VV67 1664 aaKnown RBP10.02□□□□□ -0.8
PVT1-214ENST00000522875 PPFIA3O75145 1194 aa10.02□□□□□ -0.81
PVT1-214ENST00000522875 MICAL2O94851 1124 aa10.02□□□□□ -0.81
PVT1-214ENST00000522875 HIF1AQ16665 826 aa10.02□□□□□ -0.81
PVT1-214ENST00000522875 NOM1Q5C9Z4 860 aaKnown RBP10.02□□□□□ -0.81
PVT1-214ENST00000522875 EFHC2Q5JST6 749 aa10.02□□□□□ -0.81
PVT1-214ENST00000522875 ABTB2Q8N961 1025 aa10.02□□□□□ -0.81
PVT1-214ENST00000522875 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
PVT1-214ENST00000522875 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
PVT1-214ENST00000522875 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.81
PVT1-214ENST00000522875 CFAP74Q9C0B2 1584 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 SCAPERQ9BY12 1400 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 TSPY4P0CV99 314 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 TSPY10P0CW01 314 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 ZAP70P43403 619 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 UBAP2LQ14157 1087 aaKnown RBP10.01□□□□□ -0.81
PVT1-214ENST00000522875 BTLAQ7Z6A9 289 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 NLRP8Q86W28 1048 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 ZCCHC2Q9C0B9 1178 aaKnown RBP10.01□□□□□ -0.81
PVT1-214ENST00000522875 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
PVT1-214ENST00000522875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.01□□□□□ -0.81
PVT1-214ENST00000522875 ADGRL1O94910 1474 aa10□□□□□ -0.81
PVT1-214ENST00000522875 OPLAHO14841 1288 aa10□□□□□ -0.81
PVT1-214ENST00000522875 IDH3AP50213 366 aa10□□□□□ -0.81
PVT1-214ENST00000522875 AAMPQ13685 434 aa10□□□□□ -0.81
PVT1-214ENST00000522875 IER5Q5VY09 327 aa10□□□□□ -0.81
PVT1-214ENST00000522875 TRIM22Q8IYM9 498 aa10□□□□□ -0.81
PVT1-214ENST00000522875 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
PVT1-214ENST00000522875 NEO1Q92859 1461 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 SYCP2Q9BX26 1530 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 H7C1W4 665 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 VEGFBP49765 207 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 ZNF787Q6DD87 383 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 ZNF837Q96EG3 531 aaPredicted RBP9.99□□□□□ -0.81
PVT1-214ENST00000522875 USP20Q9Y2K6 914 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 ABCC5O15440 1437 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 DAPK1P53355 1430 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
PVT1-214ENST00000522875 ABCC1P33527 1531 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 FZD6O60353 706 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 TYRO3Q06418 890 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 LBRQ14739 615 aaKnown RBP9.98□□□□□ -0.81
PVT1-214ENST00000522875 CCDC27Q2M243 656 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 ALKBH2Q6NS38 261 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 AFAP1Q8N556 730 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 CEP63Q96MT8 703 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 TRAPPC8Q9Y2L5 1435 aa9.98□□□□□ -0.81
PVT1-214ENST00000522875 ARHGEF12Q9NZN5 1544 aa9.97□□□□□ -0.81
PVT1-214ENST00000522875 RAPGEF3O95398 923 aa9.97□□□□□ -0.81
PVT1-214ENST00000522875 INPP5BP32019 993 aa9.97□□□□□ -0.81
PVT1-214ENST00000522875 MFAP1P55081 439 aaKnown RBP9.97□□□□□ -0.81
PVT1-214ENST00000522875 SAMD5Q5TGI4 173 aa9.97□□□□□ -0.81
PVT1-214ENST00000522875 GTPBP3Q969Y2 492 aaKnown RBP9.97□□□□□ -0.81
PVT1-214ENST00000522875 RRP7BPQ9NSQ0 103 aa9.97□□□□□ -0.81
PVT1-214ENST00000522875 SPAG9O60271 1321 aaKnown RBP9.97□□□□□ -0.81
PVT1-214ENST00000522875 DENND4BO75064 1496 aaPredicted RBP9.97□□□□□ -0.81
PVT1-214ENST00000522875 CCDC141Q6ZP82 1450 aa9.97□□□□□ -0.81
PVT1-214ENST00000522875 MBD5Q9P267 1494 aa9.97□□□□□ -0.81
PVT1-214ENST00000522875 DNMT1P26358 1616 aaKnown RBP9.96□□□□□ -0.81
PVT1-214ENST00000522875 DCDC2BA2VCK2 349 aa9.96□□□□□ -0.82
PVT1-214ENST00000522875 CDC14CA4D256 554 aa9.96□□□□□ -0.82
PVT1-214ENST00000522875 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.82
PVT1-214ENST00000522875 GRNP28799 593 aaKnown RBP9.96□□□□□ -0.82
PVT1-214ENST00000522875 DNM1Q05193 864 aaKnown RBP9.96□□□□□ -0.82
PVT1-214ENST00000522875 RGL4Q8IZJ4 473 aa9.96□□□□□ -0.82
PVT1-214ENST00000522875 VWA5B2Q8N398 1253 aa9.96□□□□□ -0.82
PVT1-214ENST00000522875 GPR152Q8TDT2 470 aa9.96□□□□□ -0.82
PVT1-214ENST00000522875 EDEM1Q92611 657 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms