RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 PRR20BP86481 221 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 PRR20AP86496 221 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 AGERQ15109 404 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 DDB1Q16531 1140 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 WWC1Q8IX03 1113 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 NUDT16Q96DE0 195 aaKnown RBP9.37□□□□□ -0.91
VPS13B-211ENST00000522802 ARXQ96QS3 562 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 MPHOSPH9Q99550 1183 aa9.37□□□□□ -0.91
VPS13B-211ENST00000522802 ACEP12821 1306 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 TRPM1Q7Z4N2 1603 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 SIAH2O43255 324 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 GDF9O60383 454 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 VAC14Q08AM6 782 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 GPR162Q16538 588 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 ERFEQ4G0M1 354 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 EHBP1Q8NDI1 1231 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 MRGPRX2Q96LB1 330 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 ZNF330Q9Y3S2 320 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-211ENST00000522802 ABCC6O95255 1503 aa9.36□□□□□ -0.91
VPS13B-211ENST00000522802 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
VPS13B-211ENST00000522802 ZBTB7CA1YPR0 619 aa9.35□□□□□ -0.91
VPS13B-211ENST00000522802 TNS2Q63HR2 1409 aa9.35□□□□□ -0.91
VPS13B-211ENST00000522802 TRMT44Q8IYL2 757 aaKnown RBP9.35□□□□□ -0.91
VPS13B-211ENST00000522802 ABTB2Q8N961 1025 aa9.35□□□□□ -0.91
VPS13B-211ENST00000522802 QRICH2Q9H0J4 1663 aa9.35□□□□□ -0.91
VPS13B-211ENST00000522802 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
VPS13B-211ENST00000522802 ATP10DQ9P241 1426 aa9.34□□□□□ -0.91
VPS13B-211ENST00000522802 GCP02774 474 aa9.34□□□□□ -0.91
VPS13B-211ENST00000522802 FOXC1Q12948 553 aa9.34□□□□□ -0.91
VPS13B-211ENST00000522802 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
VPS13B-211ENST00000522802 MPNDQ8N594 471 aa9.34□□□□□ -0.91
VPS13B-211ENST00000522802 FAM174AQ8TBP5 190 aa9.34□□□□□ -0.91
VPS13B-211ENST00000522802 CARD14Q9BXL6 1004 aa9.34□□□□□ -0.91
VPS13B-211ENST00000522802 FAM187AA6NFU0 413 aa9.33□□□□□ -0.92
VPS13B-211ENST00000522802 TNFRSF10AO00220 468 aa9.33□□□□□ -0.92
VPS13B-211ENST00000522802 TOM1L2Q6ZVM7 507 aa9.33□□□□□ -0.92
VPS13B-211ENST00000522802 NLGN2Q8NFZ4 835 aa9.33□□□□□ -0.92
VPS13B-211ENST00000522802 PPIP5K1Q6PFW1 1433 aa9.32□□□□□ -0.92
VPS13B-211ENST00000522802 YBX3P16989 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS13B-211ENST00000522802 MCCD1P59942 119 aaPredicted RBP9.32□□□□□ -0.92
VPS13B-211ENST00000522802 EIF4G2P78344 907 aaKnown RBP eCLIP9.32□□□□□ -0.92
VPS13B-211ENST00000522802 CDK15Q96Q40 435 aa9.32□□□□□ -0.92
VPS13B-211ENST00000522802 CDK19Q9BWU1 502 aa9.32□□□□□ -0.92
VPS13B-211ENST00000522802 WDR17Q8IZU2 1322 aa9.31□□□□□ -0.92
VPS13B-211ENST00000522802 POM121CA8CG34 1229 aa9.31□□□□□ -0.92
VPS13B-211ENST00000522802 ALG2Q9H553 416 aa9.31□□□□□ -0.92
VPS13B-211ENST00000522802 ADCY9O60503 1353 aa9.31□□□□□ -0.92
VPS13B-211ENST00000522802 NFAT5O94916 1531 aa9.31□□□□□ -0.92
VPS13B-211ENST00000522802 USP6P35125 1406 aa9.31□□□□□ -0.92
VPS13B-211ENST00000522802 BRD4O60885 1362 aaPredicted RBP9.3□□□□□ -0.92
VPS13B-211ENST00000522802 SOX11P35716 441 aa9.3□□□□□ -0.92
VPS13B-211ENST00000522802 NLRP13Q86W25 1043 aa9.3□□□□□ -0.92
VPS13B-211ENST00000522802 SNIP1Q8TAD8 396 aaKnown RBP9.3□□□□□ -0.92
VPS13B-211ENST00000522802 TOR4AQ9NXH8 423 aa9.3□□□□□ -0.92
VPS13B-211ENST00000522802 ST8SIA5O15466 376 aa9.29□□□□□ -0.92
VPS13B-211ENST00000522802 HSPA6P17066 643 aa9.29□□□□□ -0.92
VPS13B-211ENST00000522802 DZIP3Q86Y13 1208 aaKnown RBP9.29□□□□□ -0.92
VPS13B-211ENST00000522802 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
VPS13B-211ENST00000522802 ACSBG1Q96GR2 724 aa9.29□□□□□ -0.92
VPS13B-211ENST00000522802 LRRC4BQ9NT99 713 aa9.29□□□□□ -0.92
VPS13B-211ENST00000522802 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
VPS13B-211ENST00000522802 PNPLA7Q6ZV29 1317 aa9.29□□□□□ -0.92
VPS13B-211ENST00000522802 DOT1LQ8TEK3 1739 aa9.28□□□□□ -0.92
VPS13B-211ENST00000522802 GRM5P41594 1212 aa9.28□□□□□ -0.92
VPS13B-211ENST00000522802 ADAMTS19Q8TE59 1207 aa9.28□□□□□ -0.92
VPS13B-211ENST00000522802 SLC10A4Q96EP9 437 aa9.28□□□□□ -0.92
VPS13B-211ENST00000522802 CDCA7Q9BWT1 371 aaPredicted RBP9.28□□□□□ -0.92
VPS13B-211ENST00000522802 CDV3Q9UKY7 258 aaKnown RBP9.28□□□□□ -0.92
VPS13B-211ENST00000522802 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
VPS13B-211ENST00000522802 LY75O60449 1722 aa9.28□□□□□ -0.92
VPS13B-211ENST00000522802 KIAA1210Q9ULL0 1709 aa9.28□□□□□ -0.92
VPS13B-211ENST00000522802 SEMA3FQ13275 785 aa9.27□□□□□ -0.93
VPS13B-211ENST00000522802 HDGFL1Q5TGJ6 251 aa9.27□□□□□ -0.93
VPS13B-211ENST00000522802 DCAF11Q8TEB1 546 aa9.27□□□□□ -0.93
VPS13B-211ENST00000522802 ZNF526Q8TF50 670 aaPredicted RBP9.27□□□□□ -0.93
VPS13B-211ENST00000522802 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
VPS13B-211ENST00000522802 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
VPS13B-211ENST00000522802 TLL2Q9Y6L7 1015 aa9.27□□□□□ -0.93
VPS13B-211ENST00000522802 LTN1O94822 1766 aa9.27□□□□□ -0.93
VPS13B-211ENST00000522802 LCE2AQ5TA79 106 aaPredicted RBP9.26□□□□□ -0.93
VPS13B-211ENST00000522802 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
VPS13B-211ENST00000522802 CARD10Q9BWT7 1032 aa9.26□□□□□ -0.93
VPS13B-211ENST00000522802 PCNTO95613 3336 aa9.26□□□□□ -0.93
VPS13B-211ENST00000522802 CCDC7Q96M83 1385 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 ESPNB1AK53 854 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 ALDH1A1P00352 501 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 CSB-PGBD3P0DP91 1061 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 POLD1P28340 1107 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 KCNQ4P56696 695 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 ARID5BQ14865 1188 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
VPS13B-211ENST00000522802 KCTD15Q96SI1 283 aaPredicted RBP9.25□□□□□ -0.93
VPS13B-211ENST00000522802 KAT6BQ8WYB5 2073 aa9.25□□□□□ -0.93
VPS13B-211ENST00000522802 TTC24A2A3L6 582 aaPredicted RBP9.24□□□□□ -0.93
VPS13B-211ENST00000522802 J3QL48 77 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 EXOC5O00471 708 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 ADH1CP00326 375 aa9.24□□□□□ -0.93
VPS13B-211ENST00000522802 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms