RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 DUOX1Q9NRD9 1551 aa16.21■□□□□ 0.19
BRF2-204ENST00000522539 CELF2O95319 508 aaKnown RBP16.21■□□□□ 0.19
BRF2-204ENST00000522539 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
BRF2-204ENST00000522539 DPP8Q6V1X1 898 aaPredicted RBP16.21■□□□□ 0.19
BRF2-204ENST00000522539 NLRP10Q86W26 655 aa16.21■□□□□ 0.19
BRF2-204ENST00000522539 GLIS2Q9BZE0 524 aaPredicted RBP16.21■□□□□ 0.19
BRF2-204ENST00000522539 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
BRF2-204ENST00000522539 TSPYL4Q9UJ04 414 aa16.21■□□□□ 0.19
BRF2-204ENST00000522539 GRM1Q13255 1194 aa16.2■□□□□ 0.18
BRF2-204ENST00000522539 HSP90AB3PQ58FF7 597 aa16.2■□□□□ 0.18
BRF2-204ENST00000522539 MPNDQ8N594 471 aa16.2■□□□□ 0.18
BRF2-204ENST00000522539 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 YDJCA8MPS7 323 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 ANXA1P04083 346 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 EIF2S2P20042 333 aaKnown RBP16.19■□□□□ 0.18
BRF2-204ENST00000522539 GRAPQ13588 217 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 TNIP1Q15025 636 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
BRF2-204ENST00000522539 TRPM4Q8TD43 1214 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
BRF2-204ENST00000522539 HCLS1P14317 486 aaPredicted RBP16.18■□□□□ 0.18
BRF2-204ENST00000522539 TCIRG1Q13488 830 aa16.18■□□□□ 0.18
BRF2-204ENST00000522539 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
BRF2-204ENST00000522539 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
BRF2-204ENST00000522539 TMC4Q7Z404 712 aa16.18■□□□□ 0.18
BRF2-204ENST00000522539 CCDC85CA6NKD9 419 aa16.17■□□□□ 0.18
BRF2-204ENST00000522539 RAD17O75943 681 aa16.17■□□□□ 0.18
BRF2-204ENST00000522539 MLLT1Q03111 559 aaPredicted RBP16.17■□□□□ 0.18
BRF2-204ENST00000522539 DDX46Q7L014 1031 aaKnown RBP16.17■□□□□ 0.18
BRF2-204ENST00000522539 DPF2Q92785 391 aa16.17■□□□□ 0.18
BRF2-204ENST00000522539 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
BRF2-204ENST00000522539 CNOT7Q9UIV1 285 aaKnown RBP16.17■□□□□ 0.18
BRF2-204ENST00000522539 SH3TC1Q8TE82 1336 aa16.17■□□□□ 0.18
BRF2-204ENST00000522539 SHTN1A0MZ66 631 aa16.16■□□□□ 0.18
BRF2-204ENST00000522539 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
BRF2-204ENST00000522539 MCOLN1Q9GZU1 580 aa16.16■□□□□ 0.18
BRF2-204ENST00000522539 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
BRF2-204ENST00000522539 RIPK4P57078 832 aa16.15■□□□□ 0.18
BRF2-204ENST00000522539 NOGQ13253 232 aa16.15■□□□□ 0.18
BRF2-204ENST00000522539 MICALL2Q8IY33 904 aa16.15■□□□□ 0.18
BRF2-204ENST00000522539 H7C1D1 291 aa16.14■□□□□ 0.17
BRF2-204ENST00000522539 ZIC5Q96T25 663 aa16.14■□□□□ 0.17
BRF2-204ENST00000522539 TAF1P21675 1872 aa16.14■□□□□ 0.17
BRF2-204ENST00000522539 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
BRF2-204ENST00000522539 CASP8AP2Q9UKL3 1982 aa16.13■□□□□ 0.17
BRF2-204ENST00000522539 FAM155AB1AL88 458 aaPredicted RBP16.13■□□□□ 0.17
BRF2-204ENST00000522539 PSMD14O00487 310 aa16.13■□□□□ 0.17
BRF2-204ENST00000522539 TMPOP42166 694 aaKnown RBP16.13■□□□□ 0.17
BRF2-204ENST00000522539 AIMP1Q12904 312 aaKnown RBP16.13■□□□□ 0.17
BRF2-204ENST00000522539 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
BRF2-204ENST00000522539 USP48Q86UV5 1035 aa16.13■□□□□ 0.17
BRF2-204ENST00000522539 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
BRF2-204ENST00000522539 CHL1O00533 1208 aa16.12■□□□□ 0.17
BRF2-204ENST00000522539 LMOD3Q0VAK6 560 aa16.12■□□□□ 0.17
BRF2-204ENST00000522539 ISCA1Q9BUE6 129 aa16.12■□□□□ 0.17
BRF2-204ENST00000522539 ZNF408Q9H9D4 720 aa16.12■□□□□ 0.17
BRF2-204ENST00000522539 COL4A1P02462 1669 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 RPS12P25398 132 aaKnown RBP16.11■□□□□ 0.17
BRF2-204ENST00000522539 HUNKP57058 714 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 DLK2Q6UY11 383 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 SAMD7Q7Z3H4 446 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 PLBD2Q8NHP8 589 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
BRF2-204ENST00000522539 POLLQ9UGP5 575 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 RTL9Q8NET4 1388 aa16.11■□□□□ 0.17
BRF2-204ENST00000522539 EGFRP00533 1210 aa16.1■□□□□ 0.17
BRF2-204ENST00000522539 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
BRF2-204ENST00000522539 KRT26Q7Z3Y9 468 aa16.1■□□□□ 0.17
BRF2-204ENST00000522539 SAGE1Q9NXZ1 904 aa16.1■□□□□ 0.17
BRF2-204ENST00000522539 HOXB7P09629 217 aa16.09■□□□□ 0.17
BRF2-204ENST00000522539 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
BRF2-204ENST00000522539 DGKZQ13574 1117 aa16.09■□□□□ 0.17
BRF2-204ENST00000522539 RGMBQ6NW40 437 aa16.09■□□□□ 0.17
BRF2-204ENST00000522539 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
BRF2-204ENST00000522539 DBNDD1Q9H9R9 158 aa16.09■□□□□ 0.17
BRF2-204ENST00000522539 GBA2Q9HCG7 927 aaPredicted RBP16.09■□□□□ 0.17
BRF2-204ENST00000522539 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
BRF2-204ENST00000522539 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
BRF2-204ENST00000522539 ZNF609O15014 1411 aa16.09■□□□□ 0.17
BRF2-204ENST00000522539 ECE2O60344 883 aa16.08■□□□□ 0.16
BRF2-204ENST00000522539 GPSM2P81274 684 aa16.08■□□□□ 0.16
BRF2-204ENST00000522539 TBC1D10BQ4KMP7 808 aaPredicted RBP16.08■□□□□ 0.16
BRF2-204ENST00000522539 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
BRF2-204ENST00000522539 KCNQ5Q9NR82 932 aa16.08■□□□□ 0.16
BRF2-204ENST00000522539 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
BRF2-204ENST00000522539 CCDC102AQ96A19 550 aa16.07■□□□□ 0.16
BRF2-204ENST00000522539 PODXL2Q9NZ53 605 aa16.07■□□□□ 0.16
BRF2-204ENST00000522539 TRIM35Q9UPQ4 493 aa16.07■□□□□ 0.16
BRF2-204ENST00000522539 POLR2AP24928 1970 aaKnown RBP16.06■□□□□ 0.16
BRF2-204ENST00000522539 SCN9AQ15858 1988 aa16.06■□□□□ 0.16
BRF2-204ENST00000522539 ADM5C9JUS6 153 aa16.06■□□□□ 0.16
BRF2-204ENST00000522539 RIMBP2O15034 1052 aa16.06■□□□□ 0.16
BRF2-204ENST00000522539 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
BRF2-204ENST00000522539 RALBP1Q15311 655 aa16.06■□□□□ 0.16
BRF2-204ENST00000522539 C2orf69Q8N8R5 385 aa16.06■□□□□ 0.16
BRF2-204ENST00000522539 DCPSQ96C86 337 aaKnown RBP16.06■□□□□ 0.16
BRF2-204ENST00000522539 EYA3Q99504 573 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms