RNA–Protein interactions for RNA: ENST00000522466.1

PDGFRB-210, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 296 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-210ENST00000522466 MAP3K15Q6ZN16 1313 aa10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 RNF186Q9NXI6 227 aa10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 PGAP2Q9UHJ9 254 aa10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 ZBTB12Q9Y330 459 aaPredicted RBP10.71□□□□□ -0.69
PDGFRB-210ENST00000522466 RIC1Q4ADV7 1423 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 ABCC4O15439 1325 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 ADM5C9JUS6 153 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 NTSR2O95665 410 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 ZNF157P51786 506 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 GRIPAP1Q4V328 841 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 DPP8Q6V1X1 898 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 MICALL2Q8IY33 904 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 RSPH6AQ9H0K4 717 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 GBA2Q9HCG7 927 aaPredicted RBP10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 ATP6V0A2Q9Y487 856 aa10.7□□□□□ -0.7
PDGFRB-210ENST00000522466 KIF7Q2M1P5 1343 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 YDJCA8MPS7 323 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 ERVV-1B6SEH8 477 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 H7C1D1 291 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 TNIP1Q15025 636 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 KRT26Q7Z3Y9 468 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 MPNDQ8N594 471 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 C2orf69Q8N8R5 385 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 SUPT20HQ8NEM7 779 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 ZNF428Q96B54 188 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 LAMB2P55268 1798 aa10.69□□□□□ -0.7
PDGFRB-210ENST00000522466 RGL2O15211 777 aa10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 PER1O15534 1290 aaPredicted RBP10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 EGFRP00533 1210 aa10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 CTU1Q7Z7A3 348 aaKnown RBP10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 CSRNP1Q96S65 589 aa10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 PCGF6Q9BYE7 350 aa10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 SAGE1Q9NXZ1 904 aa10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
PDGFRB-210ENST00000522466 PSMD14O00487 310 aa10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 KIAA2012Q0VF49 1180 aa10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 TAF7Q15545 349 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 ZNF34Q8IZ26 560 aa10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 CCDC102AQ96A19 550 aa10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 THUMPD2Q9BTF0 503 aaKnown RBP10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 RTFDC1Q9BY42 306 aaPredicted RBP10.67□□□□□ -0.7
PDGFRB-210ENST00000522466 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 U2AF1L5P0DN76 240 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 HCLS1P14317 486 aaPredicted RBP10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 U2AF1Q01081 240 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 SP8Q8IXZ3 490 aa10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 DCPSQ96C86 337 aaKnown RBP10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 VPS33BQ9H267 617 aa10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 DBNDD1Q9H9R9 158 aa10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 KCNQ5Q9NR82 932 aa10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 HDAC9Q9UKV0 1011 aa10.66□□□□□ -0.7
PDGFRB-210ENST00000522466 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-210ENST00000522466 ASTN2O75129 1339 aaPredicted RBP10.65□□□□□ -0.7
PDGFRB-210ENST00000522466 CDHR2Q9BYE9 1310 aa10.65□□□□□ -0.7
PDGFRB-210ENST00000522466 DLG5Q8TDM6 1919 aa10.65□□□□□ -0.7
PDGFRB-210ENST00000522466 SLC10A3P09131 477 aa10.65□□□□□ -0.7
PDGFRB-210ENST00000522466 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-210ENST00000522466 UTP14AQ9BVJ6 771 aaKnown RBP10.65□□□□□ -0.7
PDGFRB-210ENST00000522466 KDM3BQ7LBC6 1761 aa10.65□□□□□ -0.71
PDGFRB-210ENST00000522466 BBOX1O75936 387 aa10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 TBC1D8O95759 1140 aa10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 ANXA1P04083 346 aa10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 SAMD1Q6SPF0 538 aaPredicted RBP10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 CFAP53Q96M91 514 aa10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 SCAF8Q9UPN6 1271 aaKnown RBP10.64□□□□□ -0.71
PDGFRB-210ENST00000522466 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 EIF2S2P20042 333 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 EIF4A1P60842 406 aaKnown RBP10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 PARP10Q53GL7 1025 aa10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 MOB2Q70IA6 237 aa10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 ZNF296Q8WUU4 475 aaPredicted RBP10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 CDCA5Q96FF9 252 aa10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 GGA3Q9NZ52 723 aa10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 NUDCQ9Y266 331 aa10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 DUOX1Q9NRD9 1551 aa10.63□□□□□ -0.71
PDGFRB-210ENST00000522466 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 ECE2O60344 883 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 AIMP1Q12904 312 aaKnown RBP10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 GRAPQ13588 217 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 KIF4BQ2VIQ3 1234 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 SLC10A5Q5PT55 438 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 SULF1Q8IWU6 871 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 GRAPLQ8TC17 118 aaPredicted RBP10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
PDGFRB-210ENST00000522466 PROSER3Q2NL68 480 aa10.61□□□□□ -0.71
PDGFRB-210ENST00000522466 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
PDGFRB-210ENST00000522466 CHRDL2Q6WN34 429 aa10.61□□□□□ -0.71
PDGFRB-210ENST00000522466 DPF2Q92785 391 aa10.61□□□□□ -0.71
PDGFRB-210ENST00000522466 NSFL1CQ9UNZ2 370 aaKnown RBP10.61□□□□□ -0.71
PDGFRB-210ENST00000522466 SCN9AQ15858 1988 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms