RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
PABPC1-219ENST00000522387 ITGA6P23229 1130 aa15.39■□□□□ 0.05
PABPC1-219ENST00000522387 ATP8B2P98198 1209 aa15.39■□□□□ 0.05
PABPC1-219ENST00000522387 RPAP2Q8IXW5 612 aaPredicted RBP15.39■□□□□ 0.05
PABPC1-219ENST00000522387 MTFR1LQ9H019 292 aa15.39■□□□□ 0.05
PABPC1-219ENST00000522387 TAF1P21675 1872 aa15.39■□□□□ 0.05
PABPC1-219ENST00000522387 SOCS7O14512 581 aa15.39■□□□□ 0.05
PABPC1-219ENST00000522387 CDHR2Q9BYE9 1310 aa15.39■□□□□ 0.05
PABPC1-219ENST00000522387 SURF6O75683 361 aaKnown RBP15.38■□□□□ 0.05
PABPC1-219ENST00000522387 CCDC57Q2TAC2 916 aa15.38■□□□□ 0.05
PABPC1-219ENST00000522387 SLC16A10Q8TF71 515 aa15.38■□□□□ 0.05
PABPC1-219ENST00000522387 RGL2O15211 777 aa15.38■□□□□ 0.05
PABPC1-219ENST00000522387 TAF7LQ5H9L4 462 aa15.38■□□□□ 0.05
PABPC1-219ENST00000522387 RWDD1Q9H446 243 aaPredicted RBP15.38■□□□□ 0.05
PABPC1-219ENST00000522387 IFIT5Q13325 482 aaKnown RBP15.37■□□□□ 0.05
PABPC1-219ENST00000522387 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-219ENST00000522387 HDAC5Q9UQL6 1122 aa15.37■□□□□ 0.05
PABPC1-219ENST00000522387 NOP58Q9Y2X3 529 aaKnown RBP15.37■□□□□ 0.05
PABPC1-219ENST00000522387 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
PABPC1-219ENST00000522387 QSER1Q2KHR3 1735 aa15.37■□□□□ 0.05
PABPC1-219ENST00000522387 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
PABPC1-219ENST00000522387 CHRNA5P30532 468 aa15.37■□□□□ 0.05
PABPC1-219ENST00000522387 OS9Q13438 667 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-219ENST00000522387 PUS3Q9BZE2 481 aaKnown RBP15.37■□□□□ 0.05
PABPC1-219ENST00000522387 POLD1P28340 1107 aa15.36■□□□□ 0.05
PABPC1-219ENST00000522387 CCDC152Q4G0S7 254 aa15.36■□□□□ 0.05
PABPC1-219ENST00000522387 SMARCA5O60264 1052 aaPredicted RBP15.35■□□□□ 0.05
PABPC1-219ENST00000522387 HMMRO75330 724 aa15.35■□□□□ 0.05
PABPC1-219ENST00000522387 CSF1RP07333 972 aa15.35■□□□□ 0.05
PABPC1-219ENST00000522387 PTPN12Q05209 780 aaKnown RBP15.35■□□□□ 0.05
PABPC1-219ENST00000522387 SSH3Q8TE77 659 aa15.35■□□□□ 0.05
PABPC1-219ENST00000522387 PLA2G12BQ9BX93 195 aa15.35■□□□□ 0.05
PABPC1-219ENST00000522387 TNRC6CQ9HCJ0 1690 aaKnown RBP15.35■□□□□ 0.05
PABPC1-219ENST00000522387 AAMPQ13685 434 aa15.35■□□□□ 0.05
PABPC1-219ENST00000522387 LRRC24Q50LG9 513 aa15.35■□□□□ 0.05
PABPC1-219ENST00000522387 CELF1Q92879 486 aaKnown RBP15.35■□□□□ 0.05
PABPC1-219ENST00000522387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.35■□□□□ 0.05
PABPC1-219ENST00000522387 COL4A1P02462 1669 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 RPGRQ92834 1020 aaKnown RBP15.34■□□□□ 0.05
PABPC1-219ENST00000522387 ZNF622Q969S3 477 aaKnown RBP eCLIP15.34■□□□□ 0.05
PABPC1-219ENST00000522387 IL1RAPL2Q9NP60 686 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-219ENST00000522387 MYH3P11055 1940 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 CASZ1Q86V15 1759 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 A0A0G2JLW4 131 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 ANKRD18BA2A2Z9 1011 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 RFX5P48382 616 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-219ENST00000522387 MTX1Q13505 466 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 HDAC1Q13547 482 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-219ENST00000522387 ANKRD45Q5TZF3 282 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 LDHAL6AQ6ZMR3 332 aa15.34■□□□□ 0.05
PABPC1-219ENST00000522387 PTGER2P43116 358 aa15.33■□□□□ 0.05
PABPC1-219ENST00000522387 POLA2Q14181 598 aa15.33■□□□□ 0.05
PABPC1-219ENST00000522387 HELBQ8NG08 1087 aaPredicted RBP15.33■□□□□ 0.05
PABPC1-219ENST00000522387 BRIP1Q9BX63 1249 aa15.33■□□□□ 0.05
PABPC1-219ENST00000522387 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
PABPC1-219ENST00000522387 SNAP23O00161 211 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 HSP90B1P14625 803 aaKnown RBP15.32■□□□□ 0.04
PABPC1-219ENST00000522387 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 MPHOSPH8Q99549 860 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 LNPKQ9C0E8 428 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 SPON1Q9HCB6 807 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 CNNM1Q9NRU3 951 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 SF3B3Q15393 1217 aaKnown RBP15.32■□□□□ 0.04
PABPC1-219ENST00000522387 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 DCTPP1Q9H773 170 aa15.32■□□□□ 0.04
PABPC1-219ENST00000522387 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
PABPC1-219ENST00000522387 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
PABPC1-219ENST00000522387 G3BP1Q13283 466 aaKnown RBP eCLIP15.31■□□□□ 0.044e-11■■□□□ 14
PABPC1-219ENST00000522387 SGIP1Q9BQI5 828 aa15.31■□□□□ 0.04
PABPC1-219ENST00000522387 KDM2BQ8NHM5 1336 aa15.31■□□□□ 0.04
PABPC1-219ENST00000522387 LAMB2P55268 1798 aa15.31■□□□□ 0.04
PABPC1-219ENST00000522387 TAF5LO75529 589 aa15.31■□□□□ 0.04
PABPC1-219ENST00000522387 SRGNP10124 158 aa15.31■□□□□ 0.04
PABPC1-219ENST00000522387 PDE6BP35913 854 aa15.31■□□□□ 0.04
PABPC1-219ENST00000522387 C16orf71Q8IYS4 520 aaPredicted RBP15.31■□□□□ 0.04
PABPC1-219ENST00000522387 ANKRD31Q8N7Z5 1873 aa15.3■□□□□ 0.04
PABPC1-219ENST00000522387 H0YIN7 160 aa15.3■□□□□ 0.04
PABPC1-219ENST00000522387 ANP32AP39687 249 aaKnown RBP15.3■□□□□ 0.04
PABPC1-219ENST00000522387 ANKRD18AQ8IVF6 992 aa15.3■□□□□ 0.04
PABPC1-219ENST00000522387 IGHMBP2P38935 993 aaKnown RBP15.29■□□□□ 0.04
PABPC1-219ENST00000522387 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
PABPC1-219ENST00000522387 SPEF2Q9C093 1822 aa15.29■□□□□ 0.04
PABPC1-219ENST00000522387 SASH1O94885 1247 aa15.29■□□□□ 0.04
PABPC1-219ENST00000522387 RGS3P49796 1198 aa15.29■□□□□ 0.04
PABPC1-219ENST00000522387 RPS8P62241 208 aaKnown RBP15.29■□□□□ 0.04
PABPC1-219ENST00000522387 TFCP2Q12800 502 aa15.29■□□□□ 0.04
PABPC1-219ENST00000522387 CRY2Q49AN0 593 aa15.29■□□□□ 0.04
PABPC1-219ENST00000522387 COPRSQ9NQ92 184 aa15.29■□□□□ 0.04
PABPC1-219ENST00000522387 DPEP1P16444 411 aa15.28■□□□□ 0.04
PABPC1-219ENST00000522387 ATG9AQ7Z3C6 839 aa15.28■□□□□ 0.04
PABPC1-219ENST00000522387 CDC5LQ99459 802 aaKnown RBP15.28■□□□□ 0.04
PABPC1-219ENST00000522387 PDZRN3Q9UPQ7 1066 aa15.28■□□□□ 0.04
PABPC1-219ENST00000522387 EYA2O00167 538 aa15.28■□□□□ 0.04
PABPC1-219ENST00000522387 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
PABPC1-219ENST00000522387 NRXN2Q9P2S2 1712 aa15.28■□□□□ 0.04
PABPC1-219ENST00000522387 METTL24Q5JXM2 366 aa15.27■□□□□ 0.04
PABPC1-219ENST00000522387 TSHZ3Q63HK5 1081 aa15.27■□□□□ 0.04
PABPC1-219ENST00000522387 SMC5Q8IY18 1101 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms