RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 SKILP12757 684 aa13.02□□□□□ -0.32
LAMA4-219ENST00000522006 HSPA4P34932 840 aa13.02□□□□□ -0.32
LAMA4-219ENST00000522006 MNAT1P51948 309 aa13.02□□□□□ -0.32
LAMA4-219ENST00000522006 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.32
LAMA4-219ENST00000522006 HSP90AA4PQ58FG1 418 aa13.02□□□□□ -0.32
LAMA4-219ENST00000522006 SPATA24Q86W54 205 aa13.02□□□□□ -0.32
LAMA4-219ENST00000522006 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.32
LAMA4-219ENST00000522006 BICD1Q96G01 975 aa13.02□□□□□ -0.32
LAMA4-219ENST00000522006 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.32
LAMA4-219ENST00000522006 NAIPQ13075 1403 aa13.02□□□□□ -0.33
LAMA4-219ENST00000522006 KLF18A0A0U1RQI7 1052 aa13.02□□□□□ -0.33
LAMA4-219ENST00000522006 STAT6P42226 847 aa13.02□□□□□ -0.33
LAMA4-219ENST00000522006 NUCB1Q02818 461 aa13.02□□□□□ -0.33
LAMA4-219ENST00000522006 NSRP1Q9H0G5 558 aaKnown RBP13.02□□□□□ -0.33
LAMA4-219ENST00000522006 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
LAMA4-219ENST00000522006 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
LAMA4-219ENST00000522006 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
LAMA4-219ENST00000522006 POGZQ7Z3K3 1410 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 ATP5J2-PTCD1G3V325 749 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 ACTN2P35609 894 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 RBM25P49756 843 aaKnown RBP13.01□□□□□ -0.33
LAMA4-219ENST00000522006 FBF1Q8TES7 1133 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 LDHAL6AQ6ZMR3 332 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 DDX12PQ92771 950 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 RSPH14Q9UHP6 348 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 CAMSAP2Q08AD1 1489 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 WTAPQ15007 396 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 BRF1Q92994 677 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 ARFGAP3Q9NP61 516 aa13.01□□□□□ -0.33
LAMA4-219ENST00000522006 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
LAMA4-219ENST00000522006 SELENOOQ9BVL4 669 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 BAG3O95817 575 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 TTLL12Q14166 644 aaPredicted RBP13□□□□□ -0.33
LAMA4-219ENST00000522006 CCDC186Q7Z3E2 898 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 KCNG4Q8TDN1 519 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 ALG1Q9BT22 464 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 KIF4AO95239 1232 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
LAMA4-219ENST00000522006 LRRC2Q9BYS8 371 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
LAMA4-219ENST00000522006 IVLP07476 585 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 SDSP20132 328 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 MXRA7P84157 204 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 FEZ1Q99689 392 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 SRRTQ9BXP5 876 aaKnown RBP13□□□□□ -0.33
LAMA4-219ENST00000522006 MSL1Q68DK7 614 aa13□□□□□ -0.33
LAMA4-219ENST00000522006 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 MCM6Q14566 821 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 JARID2Q92833 1246 aaPredicted RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 MRC2Q9UBG0 1479 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 FAM83GA6ND36 823 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 MRPS27Q92552 414 aaKnown RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 UBE3BQ7Z3V4 1068 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 KRT23Q9C075 422 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 DNAJC25Q9H1X3 360 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 PABPN1LA6NDY0 278 aaKnown RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 SYT1P21579 422 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 DDX46Q7L014 1031 aaKnown RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 TTC21BQ7Z4L5 1316 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 ZBTB43O43298 467 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 LDHCP07864 332 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 PTGS1P23219 599 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 CCDC6Q16204 474 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 ERMNQ8TAM6 284 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 SREK1Q8WXA9 508 aaKnown RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 SPAG5Q96R06 1193 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 PLVAPQ9BX97 442 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 CRNKL1Q9BZJ0 848 aaKnown RBP12.99□□□□□ -0.33
LAMA4-219ENST00000522006 SYNCQ9H7C4 482 aa12.99□□□□□ -0.33
LAMA4-219ENST00000522006 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
LAMA4-219ENST00000522006 CTAGE9A4FU28 777 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 PI4KAP2A4QPH2 592 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 OPA1O60313 960 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 HLA-DOAP06340 250 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
LAMA4-219ENST00000522006 PI4KAP1Q8N8J0 262 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 CABP5Q9NP86 173 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.98□□□□□ -0.33
LAMA4-219ENST00000522006 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 Q6ZUG5 572 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 IQCGQ9H095 443 aaKnown RBP12.98□□□□□ -0.33
LAMA4-219ENST00000522006 NSD2O96028 1365 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 KRT13P13646 458 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 RHPN1Q8TCX5 695 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 GTF2A1P52655 376 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-219ENST00000522006 GOLGA1Q92805 767 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 TSPY3P0CV98 308 aa12.98□□□□□ -0.33
LAMA4-219ENST00000522006 TSPY8P0CW00 308 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms