RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	POLR3E	Q9NVU0	708 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	WWC3	Q9ULE0	1092 aa		7.04	□□□□□ -1.28
CDH17-205	ENST00000521491	C5	P01031	1676 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	SOWAHB	A6NEL2	793 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	GRIN3B	O60391	1043 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	TAT	P17735	454 aa	Predicted RBP	7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	DCTN1	Q14203	1278 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	CCDC27	Q2M243	656 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	TUSC1	Q2TAM9	212 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	KMT5B	Q4FZB7	885 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	RIC3	Q7Z5B4	369 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	GAS2L2	Q8NHY3	880 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	ZNF526	Q8TF50	670 aa	Predicted RBP	7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	WNT2B	Q93097	391 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	THUMPD2	Q9BTF0	503 aa	Known RBP	7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	PRR14	Q9BWN1	585 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	ITGB4	P16144	1822 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	TAF1L	Q8IZX4	1826 aa		7.03	□□□□□ -1.28
CDH17-205	ENST00000521491	SPTLC1	O15269	473 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	HOXA2	O43364	376 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	LMOD3	Q0VAK6	560 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	GRIPAP1	Q4V328	841 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	RSBN1L	Q6PCB5	846 aa	Predicted RBP	7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	MPRIP	Q6WCQ1	1025 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	MCM10	Q7L590	875 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	CDAN1	Q8IWY9	1227 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	NGEF	Q8N5V2	710 aa		7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
CDH17-205	ENST00000521491	KDM6A	O15550	1401 aa	Predicted RBP	7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	PALLD	Q8WX93	1383 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	PLEKHG2	Q9H7P9	1386 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	MOXD2P	A6NHM9	499 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	GNAT3	A8MTJ3	354 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	CYP27B1	O15528	508 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	AMOT	Q4VCS5	1084 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	WDR63	Q8IWG1	891 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	LIMD1	Q9UGP4	676 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	LAS1L	Q9Y4W2	734 aa	Known RBP	7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	CD2AP	Q9Y5K6	639 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	GOLGB1	Q14789	3259 aa	Known RBP	7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	C4B	P0C0L5	1744 aa		7.01	□□□□□ -1.29
CDH17-205	ENST00000521491	MRC1	P22897	1456 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	ADCY9	O60503	1353 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491		E9PSI1	815 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	PHKG2	P15735	406 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	BCAM	P50895	628 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	PPP4C	P60510	307 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	SLFN5	Q08AF3	891 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	AKAP4	Q5JQC9	854 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	C1orf141	Q5JVX7	400 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	DUSP27	Q5VZP5	1158 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	RTF1	Q92541	710 aa	Known RBP	7	□□□□□ -1.29
CDH17-205	ENST00000521491	TSR2	Q969E8	191 aa	Known RBP	7	□□□□□ -1.29
CDH17-205	ENST00000521491	TSR3	Q9UJK0	312 aa	Known RBP	7	□□□□□ -1.29
CDH17-205	ENST00000521491	HPS5	Q9UPZ3	1129 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	SPG7	Q9UQ90	795 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	UBR2	Q8IWV8	1755 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	PCDH11X	Q9BZA7	1347 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	PCDH11Y	Q9BZA8	1340 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	FANCI	Q9NVI1	1328 aa		7	□□□□□ -1.29
CDH17-205	ENST00000521491	UBR3	Q6ZT12	1888 aa		6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	ACTN4	O43707	911 aa	Known RBP	6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	NDUFV2	P19404	249 aa		6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	ATP6V1A	P38606	617 aa		6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	FUT2	Q10981	343 aa		6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	PIGB	Q92521	554 aa		6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	LGR6	Q9HBX8	967 aa		6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	IL16	Q14005	1332 aa		6.99	□□□□□ -1.29
CDH17-205	ENST00000521491	CEMIP	Q8WUJ3	1361 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	LAMB4	A4D0S4	1761 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	RNMT	O43148	476 aa	Known RBP	6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	HTATSF1	O43719	755 aa	Known RBP	6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	FDX1	P10109	184 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	HSPA6	P17066	643 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	CALD1	Q05682	793 aa	Known RBP	6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	FLII	Q13045	1269 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	PRPF38B	Q5VTL8	546 aa	Known RBP	6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	TRMT2A	Q8IZ69	625 aa	Known RBP	6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	IFNL2	Q8IZJ0	200 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	LINC00116	Q8NCU8	138 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	FLAD1	Q8NFF5	587 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	IL17RE	Q8NFR9	667 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	MBIP	Q9NS73	344 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	IFT57	Q9NWB7	429 aa		6.98	□□□□□ -1.29
CDH17-205	ENST00000521491	ZNF853	P0CG23	659 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	GNAI1	P63096	354 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	ITPK1	Q13572	414 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	PPP2R2D	Q66LE6	453 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	THSD4	Q6ZMP0	1018 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	ZBTB3	Q9H5J0	574 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	MYH16	Q9H6N6	1097 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	MIS18A	Q9NYP9	233 aa		6.97	□□□□□ -1.29
CDH17-205	ENST00000521491	KIAA1551	Q9HCM1	1747 aa		6.96	□□□□□ -1.29
CDH17-205	ENST00000521491	CEP350	Q5VT06	3117 aa		6.96	□□□□□ -1.3
CDH17-205	ENST00000521491	LOC102724428	A0A0B4J2F2	783 aa		6.96	□□□□□ -1.3
CDH17-205	ENST00000521491	SIK1	P57059	783 aa		6.96	□□□□□ -1.3
CDH17-205	ENST00000521491	EXOSC9	Q06265	439 aa	Known RBP	6.96	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms