RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 BCL2L13Q9BXK5 485 aa11.22□□□□□ -0.61
NUDCD1-204ENST00000521439 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
NUDCD1-204ENST00000521439 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
NUDCD1-204ENST00000521439 C8orf34Q49A92 452 aa11.21□□□□□ -0.61
NUDCD1-204ENST00000521439 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
NUDCD1-204ENST00000521439 GOLGA6L1Q8N7Z2 621 aa11.21□□□□□ -0.61
NUDCD1-204ENST00000521439 ALKBH8Q96BT7 664 aaKnown RBP11.21□□□□□ -0.61
NUDCD1-204ENST00000521439 BRD7Q9NPI1 651 aa11.21□□□□□ -0.61
NUDCD1-204ENST00000521439 HCN2Q9UL51 889 aa11.21□□□□□ -0.61
NUDCD1-204ENST00000521439 FNDC3AQ9Y2H6 1198 aaKnown RBP11.21□□□□□ -0.61
NUDCD1-204ENST00000521439 GPR182O15218 404 aa11.2□□□□□ -0.62
NUDCD1-204ENST00000521439 PLCB3Q01970 1234 aa11.2□□□□□ -0.62
NUDCD1-204ENST00000521439 DSC3Q14574 896 aa11.2□□□□□ -0.62
NUDCD1-204ENST00000521439 KCNMB2Q9Y691 235 aa11.2□□□□□ -0.62
NUDCD1-204ENST00000521439 ARAFP10398 606 aa11.19□□□□□ -0.62
NUDCD1-204ENST00000521439 GRNP28799 593 aaKnown RBP11.19□□□□□ -0.62
NUDCD1-204ENST00000521439 FMR1Q06787 632 aaKnown RBP eCLIP11.19□□□□□ -0.62
NUDCD1-204ENST00000521439 ZNF428Q96B54 188 aa11.19□□□□□ -0.62
NUDCD1-204ENST00000521439 AVENQ9NQS1 362 aaPredicted RBP11.19□□□□□ -0.62
NUDCD1-204ENST00000521439 ADAMTS8Q9UP79 889 aa11.19□□□□□ -0.62
NUDCD1-204ENST00000521439 OIP5O43482 229 aa11.18□□□□□ -0.62
NUDCD1-204ENST00000521439 RBM25P49756 843 aaKnown RBP11.18□□□□□ -0.62
NUDCD1-204ENST00000521439 EAPPQ56P03 285 aaPredicted RBP11.18□□□□□ -0.62
NUDCD1-204ENST00000521439 FBXO33Q7Z6M2 555 aa11.18□□□□□ -0.62
NUDCD1-204ENST00000521439 NIF3L1Q9GZT8 377 aa11.18□□□□□ -0.62
NUDCD1-204ENST00000521439 C11orf16Q9NQ32 467 aa11.18□□□□□ -0.62
NUDCD1-204ENST00000521439 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
NUDCD1-204ENST00000521439 A6NHS1 94 aa11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 P4HBP07237 508 aaKnown RBP11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 KCNQ4P56696 695 aa11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 TRIP4Q15650 581 aaPredicted RBP11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 XKR5Q6UX68 686 aa11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 SLCO4C1Q6ZQN7 724 aa11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 GIPC2Q8TF65 315 aa11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 KCNH4Q9UQ05 1017 aa11.17□□□□□ -0.62
NUDCD1-204ENST00000521439 UBAP1LF5GYI3 381 aa11.16□□□□□ -0.62
NUDCD1-204ENST00000521439 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
NUDCD1-204ENST00000521439 SFSWAPQ12872 951 aaKnown RBP11.16□□□□□ -0.62
NUDCD1-204ENST00000521439 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
NUDCD1-204ENST00000521439 PRR12Q9ULL5 1215 aa11.16□□□□□ -0.62
NUDCD1-204ENST00000521439 EGFRP00533 1210 aa11.15□□□□□ -0.62
NUDCD1-204ENST00000521439 ADH6P28332 368 aa11.15□□□□□ -0.62
NUDCD1-204ENST00000521439 ZNF326Q5BKZ1 582 aaKnown RBP11.15□□□□□ -0.62
NUDCD1-204ENST00000521439 ZNF468Q5VIY5 522 aaPredicted RBP11.15□□□□□ -0.62
NUDCD1-204ENST00000521439 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
NUDCD1-204ENST00000521439 XYLBO75191 536 aa11.14□□□□□ -0.63
NUDCD1-204ENST00000521439 NEFLP07196 543 aa11.14□□□□□ -0.63
NUDCD1-204ENST00000521439 MAPK8P45983 427 aa11.14□□□□□ -0.63
NUDCD1-204ENST00000521439 ZNF438Q7Z4V0 828 aa11.14□□□□□ -0.63
NUDCD1-204ENST00000521439 GALNT6Q8NCL4 622 aa11.14□□□□□ -0.63
NUDCD1-204ENST00000521439 NEDD1Q8NHV4 660 aa11.14□□□□□ -0.63
NUDCD1-204ENST00000521439 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
NUDCD1-204ENST00000521439 EDARADDQ8WWZ3 215 aa11.13□□□□□ -0.63
NUDCD1-204ENST00000521439 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
NUDCD1-204ENST00000521439 TAGLNQ01995 201 aaKnown RBP11.12□□□□□ -0.63
NUDCD1-204ENST00000521439 C1orf229Q6ZS94 237 aaPredicted RBP11.12□□□□□ -0.63
NUDCD1-204ENST00000521439 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
NUDCD1-204ENST00000521439 SPEM2Q0P670 501 aa11.11□□□□□ -0.63
NUDCD1-204ENST00000521439 NEUROD1Q13562 356 aa11.11□□□□□ -0.63
NUDCD1-204ENST00000521439 TNFRSF21O75509 655 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 EPXP11678 715 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 FGD1P98174 961 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 ORC1Q13415 861 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 CCINQ13939 588 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 GRIN2CQ14957 1233 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 ENOX2Q16206 610 aaKnown RBP11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 SCARF2Q96GP6 870 aaPredicted RBP11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 CSRNP1Q96S65 589 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 GSX2Q9BZM3 304 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
NUDCD1-204ENST00000521439 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 SHISA8B8ZZ34 492 aa11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 PCBP4P57723 403 aaKnown RBP11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 SLC30A3Q99726 388 aa11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 DNAJC25Q9H1X3 360 aa11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 TMEM63CQ9P1W3 806 aa11.09□□□□□ -0.63
NUDCD1-204ENST00000521439 PNMA6FA0A0J9YX94 578 aa11.08□□□□□ -0.64
NUDCD1-204ENST00000521439 EIF1AYO14602 144 aaKnown RBP11.08□□□□□ -0.64
NUDCD1-204ENST00000521439 SIN3BO75182 1162 aa11.08□□□□□ -0.64
NUDCD1-204ENST00000521439 ATP2B2Q01814 1243 aa11.08□□□□□ -0.64
NUDCD1-204ENST00000521439 FCHSD1Q86WN1 690 aa11.08□□□□□ -0.64
NUDCD1-204ENST00000521439 FOXD3Q9UJU5 478 aaPredicted RBP11.08□□□□□ -0.64
NUDCD1-204ENST00000521439 E9PSI1 815 aa11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 CPNE3O75131 537 aaKnown RBP11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 SASH3O75995 380 aa11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 ABI2Q9NYB9 513 aaPredicted RBP11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
NUDCD1-204ENST00000521439 AMPD1P23109 780 aa11.06□□□□□ -0.64
NUDCD1-204ENST00000521439 TARSP26639 723 aaKnown RBP11.06□□□□□ -0.64
NUDCD1-204ENST00000521439 KCNMA1Q12791 1236 aa11.06□□□□□ -0.64
NUDCD1-204ENST00000521439 ALG1LQ6GMV1 187 aa11.06□□□□□ -0.64
NUDCD1-204ENST00000521439 ZFYVE28Q9HCC9 887 aa11.06□□□□□ -0.64
NUDCD1-204ENST00000521439 PHACTR2O75167 634 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms