RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 MUC3AQ02505 3323 aa10.17□□□□□ -0.78
CTNNA1-227ENST00000521387 NPC1L1Q9UHC9 1359 aa10.16□□□□□ -0.78
CTNNA1-227ENST00000521387 FKTNO75072 461 aa10.16□□□□□ -0.78
CTNNA1-227ENST00000521387 ST5P78524 1137 aa10.16□□□□□ -0.78
CTNNA1-227ENST00000521387 LARGE2Q8N3Y3 721 aa10.16□□□□□ -0.78
CTNNA1-227ENST00000521387 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 ST20-MTHFSA0A0A6YYL1 179 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 ADM5C9JUS6 153 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 MTHFSP49914 203 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 SLC39A6Q13433 755 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 ZNF530Q6P9A1 599 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 OTOP1Q7RTM1 612 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 SPNS2Q8IVW8 549 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 PUS7Q96PZ0 661 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 SETDB2Q96T68 719 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 STXBP5LQ9Y2K9 1186 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 ANKRD26Q9UPS8 1709 aa10.15□□□□□ -0.78
CTNNA1-227ENST00000521387 CAMTA2O94983 1202 aa10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 EGFRP00533 1210 aa10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 TM4SF4P48230 202 aa10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 CAP1Q01518 475 aa10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 TRIM17Q9Y577 477 aa10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 POLR2AP24928 1970 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 ROCK2O75116 1388 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-227ENST00000521387 CLSPNQ9HAW4 1339 aa10.13□□□□□ -0.79
CTNNA1-227ENST00000521387 Q7L0L9 218 aa10.13□□□□□ -0.79
CTNNA1-227ENST00000521387 KRT26Q7Z3Y9 468 aa10.13□□□□□ -0.79
CTNNA1-227ENST00000521387 CFHR5Q9BXR6 569 aa10.13□□□□□ -0.79
CTNNA1-227ENST00000521387 SCN7AQ01118 1682 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 A0A087WZG4 1122 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 PPM1GO15355 546 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 PLA2G5P39877 138 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 PLEKHO1Q53GL0 409 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 NIM1KQ8IY84 436 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 MIER1Q8N108 512 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 CNOT7Q9UIV1 285 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 PTPN22Q9Y2R2 807 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 PCDHB13Q9Y5F0 798 aa10.12□□□□□ -0.79
CTNNA1-227ENST00000521387 MRC1P22897 1456 aa10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 WTIPA6NIX2 430 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 ALDH1B1P30837 517 aa10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 EIF4A2Q14240 407 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 IER5LQ5T953 404 aa10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 SAMD7Q7Z3H4 446 aa10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 ZNF333Q96JL9 665 aa10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 MTMR10Q9NXD2 777 aa10.11□□□□□ -0.79
CTNNA1-227ENST00000521387 EYSQ5T1H1 3165 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 NPHP1O15259 732 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 AOC3Q16853 763 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 CC2D2BQ6DHV5 1058 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 MOB2Q70IA6 237 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 DEFB123Q8N688 67 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 MARVELD3Q96A59 401 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 LGR6Q9HBX8 967 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 ZNRF3Q9ULT6 936 aa10.1□□□□□ -0.79
CTNNA1-227ENST00000521387 CDHR2Q9BYE9 1310 aa10.09□□□□□ -0.79
CTNNA1-227ENST00000521387 PRUNE2Q8WUY3 3088 aa10.09□□□□□ -0.79
CTNNA1-227ENST00000521387 PPIP5K2O43314 1243 aa10.09□□□□□ -0.79
CTNNA1-227ENST00000521387 RAD17O75943 681 aa10.09□□□□□ -0.79
CTNNA1-227ENST00000521387 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-227ENST00000521387 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
CTNNA1-227ENST00000521387 SLC52A2Q9HAB3 445 aa10.09□□□□□ -0.79
CTNNA1-227ENST00000521387 A0A1W2PPC1 479 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 CRY2Q49AN0 593 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 IFNL1Q8IU54 200 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 MICALL2Q8IY33 904 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 CDCA5Q96FF9 252 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 TMEM106CQ9BVX2 250 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 BCL2L13Q9BXK5 485 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 LAMB4A4D0S4 1761 aa10.08□□□□□ -0.8
CTNNA1-227ENST00000521387 ASTN2O75129 1339 aaPredicted RBP10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 YDJCA8MPS7 323 aa10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 TBC1D10BQ4KMP7 808 aaPredicted RBP10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 GPR153Q6NV75 609 aa10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 DPF3Q92784 378 aa10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 POLKQ9UBT6 870 aa10.07□□□□□ -0.8
CTNNA1-227ENST00000521387 H7C1D1 291 aa10.06□□□□□ -0.8
CTNNA1-227ENST00000521387 ZBTB7BO15156 539 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-227ENST00000521387 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-227ENST00000521387 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
CTNNA1-227ENST00000521387 ZNF330Q9Y3S2 320 aaPredicted RBP10.06□□□□□ -0.8
CTNNA1-227ENST00000521387 UBE2Q2LH0YL09 131 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 STARD3NLO95772 234 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 A1BGP04217 495 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 PLCG2P16885 1265 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 C1orf141Q5JVX7 400 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 UBE2Q1Q7Z7E8 422 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 CD99L2Q8TCZ2 262 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 SHISA4Q96DD7 197 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 FAM122AQ96E09 287 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 TESK2Q96S53 571 aa10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
CTNNA1-227ENST00000521387 PRAMEF22A3QJZ6 481 aa10.04□□□□□ -0.8
CTNNA1-227ENST00000521387 TCERG1O14776 1098 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms