RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
PVT1-210ENST00000521122 EMILIN1Q9Y6C2 1016 aa12.29□□□□□ -0.44
PVT1-210ENST00000521122 KDM3BQ7LBC6 1761 aa12.28□□□□□ -0.44
PVT1-210ENST00000521122 BMP8BP34820 402 aa12.28□□□□□ -0.44
PVT1-210ENST00000521122 UBE2Q1Q7Z7E8 422 aa12.28□□□□□ -0.44
PVT1-210ENST00000521122 SULF1Q8IWU6 871 aa12.28□□□□□ -0.44
PVT1-210ENST00000521122 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
PVT1-210ENST00000521122 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
PVT1-210ENST00000521122 RAD17O75943 681 aa12.27□□□□□ -0.45
PVT1-210ENST00000521122 CAMTA2O94983 1202 aa12.27□□□□□ -0.45
PVT1-210ENST00000521122 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
PVT1-210ENST00000521122 PLEKHO1Q53GL0 409 aaPredicted RBP12.27□□□□□ -0.45
PVT1-210ENST00000521122 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
PVT1-210ENST00000521122 PPEF1O14829 653 aaPredicted RBP12.26□□□□□ -0.45
PVT1-210ENST00000521122 EGFRP00533 1210 aa12.26□□□□□ -0.45
PVT1-210ENST00000521122 MYCP01106 439 aaPredicted RBP12.26□□□□□ -0.45
PVT1-210ENST00000521122 PUS7Q96PZ0 661 aaKnown RBP12.26□□□□□ -0.45
PVT1-210ENST00000521122 STARD3NLO95772 234 aa12.25□□□□□ -0.45
PVT1-210ENST00000521122 BCAMP50895 628 aa12.25□□□□□ -0.45
PVT1-210ENST00000521122 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
PVT1-210ENST00000521122 DPF2Q92785 391 aa12.25□□□□□ -0.45
PVT1-210ENST00000521122 GDF15Q99988 308 aa12.25□□□□□ -0.45
PVT1-210ENST00000521122 PTCH2Q9Y6C5 1203 aa12.25□□□□□ -0.45
PVT1-210ENST00000521122 CAP1Q01518 475 aa12.24□□□□□ -0.45
PVT1-210ENST00000521122 CRY2Q49AN0 593 aa12.24□□□□□ -0.45
PVT1-210ENST00000521122 AMOTQ4VCS5 1084 aa12.24□□□□□ -0.45
PVT1-210ENST00000521122 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
PVT1-210ENST00000521122 TPTE2Q6XPS3 522 aa12.24□□□□□ -0.45
PVT1-210ENST00000521122 MOB2Q70IA6 237 aa12.24□□□□□ -0.45
PVT1-210ENST00000521122 GGA3Q9NZ52 723 aa12.24□□□□□ -0.45
PVT1-210ENST00000521122 ZNF330Q9Y3S2 320 aaPredicted RBP12.24□□□□□ -0.45
PVT1-210ENST00000521122 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
PVT1-210ENST00000521122 PRAMEF22A3QJZ6 481 aa12.23□□□□□ -0.45
PVT1-210ENST00000521122 UBE2Q2LH0YL09 131 aa12.23□□□□□ -0.45
PVT1-210ENST00000521122 IL6STP40189 918 aaPredicted RBP12.23□□□□□ -0.45
PVT1-210ENST00000521122 SLC39A6Q13433 755 aa12.23□□□□□ -0.45
PVT1-210ENST00000521122 SLC51AQ86UW1 340 aa12.23□□□□□ -0.45
PVT1-210ENST00000521122 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
PVT1-210ENST00000521122 PPM1GO15355 546 aaPredicted RBP12.22□□□□□ -0.45
PVT1-210ENST00000521122 EVI5O60447 810 aa12.22□□□□□ -0.45
PVT1-210ENST00000521122 FAM109BQ6ICB4 259 aaPredicted RBP12.22□□□□□ -0.45
PVT1-210ENST00000521122 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
PVT1-210ENST00000521122 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
PVT1-210ENST00000521122 SP3Q02447 781 aa12.21□□□□□ -0.45
PVT1-210ENST00000521122 RBM26Q5T8P6 1007 aaKnown RBP12.21□□□□□ -0.45
PVT1-210ENST00000521122 CLEC4GQ6UXB4 293 aa12.21□□□□□ -0.45
PVT1-210ENST00000521122 SUPT20HQ8NEM7 779 aa12.21□□□□□ -0.45
PVT1-210ENST00000521122 MAFAQ8NHW3 353 aaPredicted RBP12.21□□□□□ -0.45
PVT1-210ENST00000521122 NKX2-3Q8TAU0 364 aa12.21□□□□□ -0.45
PVT1-210ENST00000521122 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
PVT1-210ENST00000521122 CDH23Q9H251 3354 aa12.21□□□□□ -0.45
PVT1-210ENST00000521122 ZNF646O15015 1829 aaPredicted RBP12.21□□□□□ -0.46
PVT1-210ENST00000521122 RAB3GAP2Q9H2M9 1393 aa12.2□□□□□ -0.46
PVT1-210ENST00000521122 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
PVT1-210ENST00000521122 HOXA10P31260 410 aaPredicted RBP12.2□□□□□ -0.46
PVT1-210ENST00000521122 INHBEP58166 350 aa12.2□□□□□ -0.46
PVT1-210ENST00000521122 TJAP1Q5JTD0 557 aa12.2□□□□□ -0.46
PVT1-210ENST00000521122 TDHQ8IZJ6 230 aa12.2□□□□□ -0.46
PVT1-210ENST00000521122 SH3TC2Q8TF17 1288 aa12.2□□□□□ -0.46
PVT1-210ENST00000521122 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
PVT1-210ENST00000521122 KIF7Q2M1P5 1343 aa12.19□□□□□ -0.46
PVT1-210ENST00000521122 YDJCA8MPS7 323 aa12.19□□□□□ -0.46
PVT1-210ENST00000521122 KIAA2012Q0VF49 1180 aa12.19□□□□□ -0.46
PVT1-210ENST00000521122 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
PVT1-210ENST00000521122 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
PVT1-210ENST00000521122 ALYREFQ86V81 257 aaKnown RBP12.19□□□□□ -0.46
PVT1-210ENST00000521122 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
PVT1-210ENST00000521122 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
PVT1-210ENST00000521122 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
PVT1-210ENST00000521122 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
PVT1-210ENST00000521122 ARHGEF6Q15052 776 aa12.18□□□□□ -0.46
PVT1-210ENST00000521122 SPRYD7Q5W111 196 aa12.18□□□□□ -0.46
PVT1-210ENST00000521122 DZIP3Q86Y13 1208 aaKnown RBP12.18□□□□□ -0.46
PVT1-210ENST00000521122 HCN4Q9Y3Q4 1203 aa12.18□□□□□ -0.46
PVT1-210ENST00000521122 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
PVT1-210ENST00000521122 IGF2BP3O00425 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
PVT1-210ENST00000521122 RPS12P25398 132 aaKnown RBP12.17□□□□□ -0.46
PVT1-210ENST00000521122 GJA8P48165 433 aa12.17□□□□□ -0.46
PVT1-210ENST00000521122 CRHR2Q13324 411 aa12.17□□□□□ -0.46
PVT1-210ENST00000521122 EIF4A2Q14240 407 aaKnown RBP12.17□□□□□ -0.46
PVT1-210ENST00000521122 RPGRQ92834 1020 aaKnown RBP12.17□□□□□ -0.46
PVT1-210ENST00000521122 UBR2Q8IWV8 1755 aa12.17□□□□□ -0.46
PVT1-210ENST00000521122 PSMD14O00487 310 aa12.16□□□□□ -0.46
PVT1-210ENST00000521122 MTFR1Q15390 333 aa12.16□□□□□ -0.46
PVT1-210ENST00000521122 FAM161BQ96MY7 647 aa12.16□□□□□ -0.46
PVT1-210ENST00000521122 TMX4Q9H1E5 349 aaPredicted RBP12.16□□□□□ -0.46
PVT1-210ENST00000521122 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
PVT1-210ENST00000521122 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
PVT1-210ENST00000521122 FAM177BA6PVY3 158 aa12.15□□□□□ -0.46
PVT1-210ENST00000521122 FARP2O94887 1054 aaPredicted RBP12.15□□□□□ -0.46
PVT1-210ENST00000521122 TTLL12Q14166 644 aaPredicted RBP12.15□□□□□ -0.46
PVT1-210ENST00000521122 ANGEL2Q5VTE6 544 aaKnown RBP12.15□□□□□ -0.46
PVT1-210ENST00000521122 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
PVT1-210ENST00000521122 CRAMP1Q96RY5 1269 aa12.15□□□□□ -0.46
PVT1-210ENST00000521122 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
PVT1-210ENST00000521122 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
PVT1-210ENST00000521122 GJB1P08034 283 aa12.14□□□□□ -0.47
PVT1-210ENST00000521122 GTF2E1P29083 439 aaPredicted RBP12.14□□□□□ -0.47
PVT1-210ENST00000521122 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
PVT1-210ENST00000521122 CDX2Q99626 313 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms