RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 SYT10Q6XYQ8 523 aa15.02■□□□□ -0
TRAPPC9-208ENST00000520857 NEK1Q96PY6 1258 aa15.02■□□□□ -0
TRAPPC9-208ENST00000520857 ST3GAL1Q11201 340 aa15.02□□□□□ -0.01
TRAPPC9-208ENST00000520857 POLA2Q14181 598 aa15.02□□□□□ -0.01
TRAPPC9-208ENST00000520857 RIC3Q7Z5B4 369 aa15.02□□□□□ -0.01
TRAPPC9-208ENST00000520857 TAF6LQ9Y6J9 622 aa15.02□□□□□ -0.01
TRAPPC9-208ENST00000520857 ELP1O95163 1332 aa15.02□□□□□ -0.01
TRAPPC9-208ENST00000520857 PLA2G4DQ86XP0 818 aa15.02□□□□□ -0.01
TRAPPC9-208ENST00000520857 FRMPD1Q5SYB0 1578 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 ERCC6LQ2NKX8 1250 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 KMT5BQ4FZB7 885 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 ST7Q9NRC1 585 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 STK38Q15208 465 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 ZNF530Q6P9A1 599 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 FBXO38Q6PIJ6 1188 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 ZBTB9Q96C00 473 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 NOL10Q9BSC4 688 aaKnown RBP15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 LGR6Q9HBX8 967 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 CCDC129Q6ZRS4 1044 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 UBXN4Q92575 508 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 EAF2Q96CJ1 260 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 ERO1AQ96HE7 468 aa15.01□□□□□ -0.01
TRAPPC9-208ENST00000520857 CAVIN2O95810 425 aa15□□□□□ -0.01
TRAPPC9-208ENST00000520857 BEND3Q5T5X7 828 aa15□□□□□ -0.01
TRAPPC9-208ENST00000520857 TIGD1Q96MW7 591 aa15□□□□□ -0.01
TRAPPC9-208ENST00000520857 ZNF396Q96N95 335 aaPredicted RBP15□□□□□ -0.01
TRAPPC9-208ENST00000520857 TMX1Q9H3N1 280 aa15□□□□□ -0.01
TRAPPC9-208ENST00000520857 ARGLU1Q9NWB6 273 aaPredicted RBP15□□□□□ -0.01
TRAPPC9-208ENST00000520857 DLG5Q8TDM6 1919 aa15□□□□□ -0.01
TRAPPC9-208ENST00000520857 MAP4K1Q92918 833 aa15□□□□□ -0.01
TRAPPC9-208ENST00000520857 TLR7Q9NYK1 1049 aaKnown RBP15□□□□□ -0.01
TRAPPC9-208ENST00000520857 MAP3K5Q99683 1374 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 URI1O94763 535 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 KRT32Q14532 448 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 NEUROD6Q96NK8 337 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 CTAGE5O15320 804 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 TNNT3P45378 269 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 C1orf141Q5JVX7 400 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 ANKRD26Q9UPS8 1709 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 MYL6BP14649 208 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 NEXNQ0ZGT2 675 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 TERF2Q15554 542 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 ARHGAP29Q52LW3 1261 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 TEX35Q5T0J7 233 aa14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 ZNF589Q86UQ0 364 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC9-208ENST00000520857 BMS1Q14692 1282 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 ZSCAN16Q9H4T2 348 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 DBF4Q9UBU7 674 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 DNAI1Q9UI46 699 aa14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 DDX58O95786 925 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 CHST3Q7LGC8 479 aa14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 IFNKQ9P0W0 207 aa14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 A0A1B0GVL5 298 aa14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 POLR3DP05423 398 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 TMCO3Q6UWJ1 677 aa14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 NCOA5Q9HCD5 579 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-208ENST00000520857 KIF2AO00139 706 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 GSDMDP57764 484 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 FAM69CQ0P6D2 419 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 DDX46Q7L014 1031 aaKnown RBP14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 SYCP1Q15431 976 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 RAB11FIP4Q86YS3 637 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 BICC1Q9H694 974 aaKnown RBP14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 LMOD1P29536 600 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 APOBRQ0VD83 1088 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 TOB2Q14106 344 aaPredicted RBP14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 PDILTQ8N807 584 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 HMG20BQ9P0W2 317 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 CALCOCO1Q9P1Z2 691 aa14.97□□□□□ -0.01
TRAPPC9-208ENST00000520857 SERPINC1P01008 464 aa14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 SYNE3Q6ZMZ3 975 aa14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 MRFAP1L1Q96HT8 127 aa14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 USP28Q96RU2 1077 aa14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 SIGLEC1Q9BZZ2 1709 aa14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 SLFN14P0C7P3 912 aa14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 SEC62Q99442 399 aaKnown RBP14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 SBNO1A3KN83 1393 aa14.96□□□□□ -0.01
TRAPPC9-208ENST00000520857 CYB5RLQ6IPT4 315 aa14.96□□□□□ -0.02
TRAPPC9-208ENST00000520857 MORC2Q9Y6X9 1032 aaPredicted RBP14.96□□□□□ -0.02
TRAPPC9-208ENST00000520857 TTC21AQ8NDW8 1320 aa14.96□□□□□ -0.02
TRAPPC9-208ENST00000520857 PTPDC1A2A3K4 754 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 CPLX1O14810 134 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 HOXC9P31274 260 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 EIF4A1P60842 406 aaKnown RBP14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 IGSF1Q8N6C5 1336 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 GRM8O00222 908 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 HSP90AA4PQ58FG1 418 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 OTUD7BQ6GQQ9 843 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 CFAP100Q494V2 611 aa14.95□□□□□ -0.02
TRAPPC9-208ENST00000520857 RESTQ13127 1097 aa14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 IL17RAQ96F46 866 aa14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 FAM160A1Q05DH4 1040 aa14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 XPO4Q9C0E2 1151 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 PLEKHG3A1L390 1219 aa14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 KSR2Q6VAB6 950 aa14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 MRPS27Q92552 414 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-208ENST00000520857 EID1Q9Y6B2 187 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms