RNA–Protein interactions for RNA: ENST00000520679.1

EXTL3-207, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-207ENST00000520679 MYT1Q01538 1121 aa17.2■□□□□ 0.34
EXTL3-207ENST00000520679 LINC00116Q8NCU8 138 aa17.2■□□□□ 0.34
EXTL3-207ENST00000520679 FAM89AQ96GI7 184 aa17.2■□□□□ 0.34
EXTL3-207ENST00000520679 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
EXTL3-207ENST00000520679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
EXTL3-207ENST00000520679 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 GPTP24298 496 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 CTSWP56202 376 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 ANAPC15P60006 121 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 RBM6P78332 1123 aaKnown RBP17.19■□□□□ 0.34
EXTL3-207ENST00000520679 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 SEPT12Q8IYM1 358 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 CCDC8Q9H0W5 538 aaPredicted RBP17.19■□□□□ 0.34
EXTL3-207ENST00000520679 SNRKQ9NRH2 765 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
EXTL3-207ENST00000520679 DBNLQ9UJU6 430 aaKnown RBP17.19■□□□□ 0.34
EXTL3-207ENST00000520679 SPEF2Q9C093 1822 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 SH3TC1Q8TE82 1336 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 RAD50Q92878 1312 aa17.19■□□□□ 0.34
EXTL3-207ENST00000520679 IRS4O14654 1257 aaPredicted RBP17.18■□□□□ 0.34
EXTL3-207ENST00000520679 SGSM2O43147 1006 aa17.18■□□□□ 0.34
EXTL3-207ENST00000520679 IFIT5Q13325 482 aaKnown RBP17.18■□□□□ 0.34
EXTL3-207ENST00000520679 TTLL11Q8NHH1 800 aa17.18■□□□□ 0.34
EXTL3-207ENST00000520679 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
EXTL3-207ENST00000520679 ARXQ96QS3 562 aa17.18■□□□□ 0.34
EXTL3-207ENST00000520679 RPS6KA4O75676 772 aa17.17■□□□□ 0.34
EXTL3-207ENST00000520679 MCCP23508 829 aa17.17■□□□□ 0.34
EXTL3-207ENST00000520679 RTL5Q5HYW3 569 aaPredicted RBP17.17■□□□□ 0.34
EXTL3-207ENST00000520679 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
EXTL3-207ENST00000520679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.17■□□□□ 0.34
EXTL3-207ENST00000520679 UTP14AQ9BVJ6 771 aaKnown RBP17.17■□□□□ 0.34
EXTL3-207ENST00000520679 QTRT2Q9H974 415 aaKnown RBP17.17■□□□□ 0.34
EXTL3-207ENST00000520679 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
EXTL3-207ENST00000520679 ABCC12Q96J65 1359 aa17.16■□□□□ 0.34
EXTL3-207ENST00000520679 ANKRD18BA2A2Z9 1011 aa17.16■□□□□ 0.34
EXTL3-207ENST00000520679 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
EXTL3-207ENST00000520679 AKAP2Q9Y2D5 859 aa17.16■□□□□ 0.34
EXTL3-207ENST00000520679 COL24A1Q17RW2 1714 aa17.16■□□□□ 0.34
EXTL3-207ENST00000520679 HMGB2P26583 209 aaKnown RBP17.15■□□□□ 0.34
EXTL3-207ENST00000520679 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
EXTL3-207ENST00000520679 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
EXTL3-207ENST00000520679 HAUS7Q99871 368 aa17.15■□□□□ 0.34
EXTL3-207ENST00000520679 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
EXTL3-207ENST00000520679 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
EXTL3-207ENST00000520679 NTSR2O95665 410 aa17.14■□□□□ 0.33
EXTL3-207ENST00000520679 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
EXTL3-207ENST00000520679 DBNDD2Q9BQY9 259 aa17.14■□□□□ 0.33
EXTL3-207ENST00000520679 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
EXTL3-207ENST00000520679 CCNL1Q9UK58 526 aaPredicted RBP17.14■□□□□ 0.33
EXTL3-207ENST00000520679 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
EXTL3-207ENST00000520679 ITGA6P23229 1130 aa17.13■□□□□ 0.33
EXTL3-207ENST00000520679 TAF7LQ5H9L4 462 aa17.13■□□□□ 0.33
EXTL3-207ENST00000520679 PTF1AQ7RTS3 328 aa17.13■□□□□ 0.33
EXTL3-207ENST00000520679 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
EXTL3-207ENST00000520679 ANO2Q9NQ90 1003 aa17.13■□□□□ 0.33
EXTL3-207ENST00000520679 NARFQ9UHQ1 456 aa17.13■□□□□ 0.33
EXTL3-207ENST00000520679 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
EXTL3-207ENST00000520679 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
EXTL3-207ENST00000520679 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
EXTL3-207ENST00000520679 HSPA4P34932 840 aa17.12■□□□□ 0.33
EXTL3-207ENST00000520679 FAM196AQ6ZSG2 479 aa17.12■□□□□ 0.33
EXTL3-207ENST00000520679 PUS3Q9BZE2 481 aaKnown RBP17.12■□□□□ 0.33
EXTL3-207ENST00000520679 LSG1Q9H089 658 aaKnown RBP17.12■□□□□ 0.33
EXTL3-207ENST00000520679 BOLA2Q9H3K6 86 aa17.12■□□□□ 0.33
EXTL3-207ENST00000520679 ANTXR1Q9H6X2 564 aa17.12■□□□□ 0.33
EXTL3-207ENST00000520679 GREM2Q9H772 168 aa17.12■□□□□ 0.33
EXTL3-207ENST00000520679 ARAP2Q8WZ64 1704 aa17.12■□□□□ 0.33
EXTL3-207ENST00000520679 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
EXTL3-207ENST00000520679 K7ELQ4 463 aaPredicted RBP17.11■□□□□ 0.33
EXTL3-207ENST00000520679 MED23Q9ULK4 1368 aa17.11■□□□□ 0.33
EXTL3-207ENST00000520679 A0A1B0GUL7 405 aa17.1■□□□□ 0.33
EXTL3-207ENST00000520679 CCDC152Q4G0S7 254 aa17.1■□□□□ 0.33
EXTL3-207ENST00000520679 KIAA1211Q6ZU35 1233 aa17.1■□□□□ 0.33
EXTL3-207ENST00000520679 SYNE4Q8N205 404 aa17.1■□□□□ 0.33
EXTL3-207ENST00000520679 KCNB2Q92953 911 aa17.1■□□□□ 0.33
EXTL3-207ENST00000520679 IL25Q9H293 177 aa17.1■□□□□ 0.33
EXTL3-207ENST00000520679 C4AP0C0L4 1744 aa17.1■□□□□ 0.33
EXTL3-207ENST00000520679 ST18O60284 1047 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 ADRA2BP18089 450 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 MCM2P49736 904 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 SLC27A3Q5K4L6 730 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 LDHAL6AQ6ZMR3 332 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 VGLL2Q8N8G2 317 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 ZNF512BQ96KM6 892 aaPredicted RBP17.09■□□□□ 0.33
EXTL3-207ENST00000520679 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 BCL2L12Q9HB09 334 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 RTCBQ9Y3I0 505 aaKnown RBP17.09■□□□□ 0.33
EXTL3-207ENST00000520679 MROH5Q6ZUA9 1318 aa17.09■□□□□ 0.33
EXTL3-207ENST00000520679 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.32
EXTL3-207ENST00000520679 KBTBD3Q8NAB2 608 aa17.08■□□□□ 0.32
EXTL3-207ENST00000520679 NYXQ9GZU5 481 aa17.08■□□□□ 0.32
EXTL3-207ENST00000520679 TIMM10P62072 90 aa17.07■□□□□ 0.32
EXTL3-207ENST00000520679 SF3B3Q15393 1217 aaKnown RBP17.07■□□□□ 0.32
EXTL3-207ENST00000520679 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
EXTL3-207ENST00000520679 CCDC158Q5M9N0 1113 aa17.07■□□□□ 0.32
EXTL3-207ENST00000520679 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
EXTL3-207ENST00000520679 CNNM1Q9NRU3 951 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms