RNA–Protein interactions for RNA: ENST00000520485.5

ARFGAP1-214, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-214ENST00000520485 AAMPQ13685 434 aa28.69■■■□□ 2.18
ARFGAP1-214ENST00000520485 NLRP3Q96P20 1036 aa28.68■■■□□ 2.18
ARFGAP1-214ENST00000520485 ATP8B2P98198 1209 aa28.67■■■□□ 2.18
ARFGAP1-214ENST00000520485 KLHL34Q8N239 644 aa28.67■■■□□ 2.18
ARFGAP1-214ENST00000520485 KLHDC4Q8TBB5 520 aa28.67■■■□□ 2.18
ARFGAP1-214ENST00000520485 CSF1RP07333 972 aa28.66■■■□□ 2.18
ARFGAP1-214ENST00000520485 HSP90B1P14625 803 aaKnown RBP28.66■■■□□ 2.18
ARFGAP1-214ENST00000520485 SPON1Q9HCB6 807 aa28.66■■■□□ 2.18
ARFGAP1-214ENST00000520485 TAF1P21675 1872 aa28.65■■■□□ 2.18
ARFGAP1-214ENST00000520485 MTX1Q13505 466 aa28.65■■■□□ 2.18
ARFGAP1-214ENST00000520485 B4GALNT3Q6L9W6 998 aa28.65■■■□□ 2.18
ARFGAP1-214ENST00000520485 RPAP2Q8IXW5 612 aaPredicted RBP28.65■■■□□ 2.18
ARFGAP1-214ENST00000520485 BRIP1Q9BX63 1249 aa28.65■■■□□ 2.18
ARFGAP1-214ENST00000520485 SEC31BQ9NQW1 1179 aa28.65■■■□□ 2.18
ARFGAP1-214ENST00000520485 SPEF2Q9C093 1822 aa28.64■■■□□ 2.18
ARFGAP1-214ENST00000520485 CCDC152Q4G0S7 254 aa28.64■■■□□ 2.18
ARFGAP1-214ENST00000520485 ZNF594Q96JF6 807 aaPredicted RBP28.64■■■□□ 2.18
ARFGAP1-214ENST00000520485 PPP1R1BQ9UD71 204 aaPredicted RBP28.64■■■□□ 2.18
ARFGAP1-214ENST00000520485 PA2G4Q9UQ80 394 aaKnown RBP28.64■■■□□ 2.18
ARFGAP1-214ENST00000520485 ITGA6P23229 1130 aa28.64■■■□□ 2.17
ARFGAP1-214ENST00000520485 IGHDP01880 384 aa28.63■■■□□ 2.17
ARFGAP1-214ENST00000520485 SF3B3Q15393 1217 aaKnown RBP28.63■■■□□ 2.17
ARFGAP1-214ENST00000520485 ERICH6BQ5W0A0 696 aa28.63■■■□□ 2.17
ARFGAP1-214ENST00000520485 RFX5P48382 616 aaPredicted RBP28.62■■■□□ 2.17
ARFGAP1-214ENST00000520485 POLA2Q14181 598 aa28.62■■■□□ 2.17
ARFGAP1-214ENST00000520485 SSH3Q8TE77 659 aa28.62■■■□□ 2.17
ARFGAP1-214ENST00000520485 PPP4R2Q9NY27 417 aa28.62■■■□□ 2.17
ARFGAP1-214ENST00000520485 KIF13BQ9NQT8 1826 aa28.62■■■□□ 2.17
ARFGAP1-214ENST00000520485 CHRNA5P30532 468 aa28.61■■■□□ 2.17
ARFGAP1-214ENST00000520485 IFIT5Q13325 482 aaKnown RBP28.61■■■□□ 2.17
ARFGAP1-214ENST00000520485 RPGRQ92834 1020 aaKnown RBP28.61■■■□□ 2.17
ARFGAP1-214ENST00000520485 CCDC136Q96JN2 1154 aa28.61■■■□□ 2.17
ARFGAP1-214ENST00000520485 SIL1Q9H173 461 aa28.61■■■□□ 2.17
ARFGAP1-214ENST00000520485 CCDC57Q2TAC2 916 aa28.6■■■□□ 2.17
ARFGAP1-214ENST00000520485 CRY2Q49AN0 593 aa28.6■■■□□ 2.17
ARFGAP1-214ENST00000520485 C2CD5Q86YS7 1000 aa28.6■■■□□ 2.17
ARFGAP1-214ENST00000520485 ANKRD18BA2A2Z9 1011 aa28.59■■■□□ 2.17
ARFGAP1-214ENST00000520485 HMMRO75330 724 aa28.59■■■□□ 2.17
ARFGAP1-214ENST00000520485 PDE6BP35913 854 aa28.59■■■□□ 2.17
ARFGAP1-214ENST00000520485 LRP5O75197 1615 aa28.59■■■□□ 2.17
ARFGAP1-214ENST00000520485 TAF7LQ5H9L4 462 aa28.59■■■□□ 2.17
ARFGAP1-214ENST00000520485 SLC51AQ86UW1 340 aa28.59■■■□□ 2.17
ARFGAP1-214ENST00000520485 RTL9Q8NET4 1388 aa28.58■■■□□ 2.17
ARFGAP1-214ENST00000520485 KIAA1551Q9HCM1 1747 aa28.58■■■□□ 2.17
ARFGAP1-214ENST00000520485 HDAC1Q13547 482 aaPredicted RBP28.58■■■□□ 2.17
ARFGAP1-214ENST00000520485 EXOC6BQ9Y2D4 811 aa28.58■■■□□ 2.17
ARFGAP1-214ENST00000520485 KLRG2A4D1S0 409 aaPredicted RBP28.57■■■□□ 2.16
ARFGAP1-214ENST00000520485 APBB1O00213 710 aa28.57■■■□□ 2.16
ARFGAP1-214ENST00000520485 PTPN12Q05209 780 aaKnown RBP28.57■■■□□ 2.16
ARFGAP1-214ENST00000520485 CACNA1SQ13698 1873 aa28.57■■■□□ 2.16
ARFGAP1-214ENST00000520485 DDX46Q7L014 1031 aaKnown RBP28.57■■■□□ 2.16
ARFGAP1-214ENST00000520485 CELF1Q92879 486 aaKnown RBP28.57■■■□□ 2.16
ARFGAP1-214ENST00000520485 RWDD1Q9H446 243 aaPredicted RBP28.56■■■□□ 2.16
ARFGAP1-214ENST00000520485 SRGNP10124 158 aa28.55■■■□□ 2.16
ARFGAP1-214ENST00000520485 PUS3Q9BZE2 481 aaKnown RBP28.55■■■□□ 2.16
ARFGAP1-214ENST00000520485 SURF6O75683 361 aaKnown RBP28.54■■■□□ 2.16
ARFGAP1-214ENST00000520485 ZNF622Q969S3 477 aaKnown RBP eCLIP28.54■■■□□ 2.161e-6■■□□□ 12.2
ARFGAP1-214ENST00000520485 RBM17Q96I25 401 aaKnown RBP28.54■■■□□ 2.16
ARFGAP1-214ENST00000520485 WWC3Q9ULE0 1092 aa28.54■■■□□ 2.16
ARFGAP1-214ENST00000520485 DLEC1Q9Y238 1755 aa28.54■■■□□ 2.16
ARFGAP1-214ENST00000520485 H0YIN7 160 aa28.53■■■□□ 2.16
ARFGAP1-214ENST00000520485 A0A0G2JLW4 131 aa28.53■■■□□ 2.16
ARFGAP1-214ENST00000520485 DPEP1P16444 411 aa28.53■■■□□ 2.16
ARFGAP1-214ENST00000520485 LRRC24Q50LG9 513 aa28.53■■■□□ 2.16
ARFGAP1-214ENST00000520485 CDC5LQ99459 802 aaKnown RBP28.53■■■□□ 2.16
ARFGAP1-214ENST00000520485 BCL11AQ9H165 835 aa28.53■■■□□ 2.16
ARFGAP1-214ENST00000520485 NPR1P16066 1061 aa28.52■■■□□ 2.16
ARFGAP1-214ENST00000520485 GRAPQ13588 217 aa28.52■■■□□ 2.16
ARFGAP1-214ENST00000520485 ANKRD18AQ8IVF6 992 aa28.52■■■□□ 2.16
ARFGAP1-214ENST00000520485 GRAPLQ8TC17 118 aaPredicted RBP28.52■■■□□ 2.16
ARFGAP1-214ENST00000520485 COPRSQ9NQ92 184 aa28.52■■■□□ 2.16
ARFGAP1-214ENST00000520485 OS9Q13438 667 aaPredicted RBP28.51■■■□□ 2.15
ARFGAP1-214ENST00000520485 MASTLQ96GX5 879 aa28.51■■■□□ 2.15
ARFGAP1-214ENST00000520485 SRCAPQ6ZRS2 3230 aa28.51■■■□□ 2.15
ARFGAP1-214ENST00000520485 KDM2BQ8NHM5 1336 aa28.5■■■□□ 2.15
ARFGAP1-214ENST00000520485 HOXA10P31260 410 aaPredicted RBP28.5■■■□□ 2.15
ARFGAP1-214ENST00000520485 IGHMBP2P38935 993 aaKnown RBP28.5■■■□□ 2.15
ARFGAP1-214ENST00000520485 NLGN2Q8NFZ4 835 aa28.5■■■□□ 2.15
ARFGAP1-214ENST00000520485 DCTPP1Q9H773 170 aa28.49■■■□□ 2.15
ARFGAP1-214ENST00000520485 LDHAL6AQ6ZMR3 332 aa28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 MPHOSPH8Q99549 860 aa28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 CNNM1Q9NRU3 951 aa28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 EYA2O00167 538 aa28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 RPS8P62241 208 aaKnown RBP28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 ATG9AQ7Z3C6 839 aa28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 FHDC1Q9C0D6 1143 aaPredicted RBP28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 CD2APQ9Y5K6 639 aa28.48■■■□□ 2.15
ARFGAP1-214ENST00000520485 G3BP1Q13283 466 aaKnown RBP eCLIP28.47■■■□□ 2.15
ARFGAP1-214ENST00000520485 STYK1Q6J9G0 422 aa28.47■■■□□ 2.15
ARFGAP1-214ENST00000520485 CRAMP1Q96RY5 1269 aa28.47■■■□□ 2.15
ARFGAP1-214ENST00000520485 NOP58Q9Y2X3 529 aaKnown RBP28.47■■■□□ 2.15
ARFGAP1-214ENST00000520485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.47■■■□□ 2.15
ARFGAP1-214ENST00000520485 PPEF1O14829 653 aaPredicted RBP28.46■■■□□ 2.15
ARFGAP1-214ENST00000520485 KCNA3P22001 575 aa28.46■■■□□ 2.15
ARFGAP1-214ENST00000520485 A0A1B0GUL6 1792 aa28.45■■■□□ 2.15
ARFGAP1-214ENST00000520485 SLX4Q8IY92 1834 aa28.45■■■□□ 2.15
ARFGAP1-214ENST00000520485 SMARCA5O60264 1052 aaPredicted RBP28.45■■■□□ 2.15
ARFGAP1-214ENST00000520485 OLFM4Q6UX06 510 aa28.45■■■□□ 2.15
ARFGAP1-214ENST00000520485 ZNF219Q9P2Y4 722 aaPredicted RBP28.45■■■□□ 2.15
ARFGAP1-214ENST00000520485 TGFB2P61812 414 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms