RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
CTHRC1-203ENST00000520337 CFAP53Q96M91 514 aa10.44□□□□□ -0.74
CTHRC1-203ENST00000520337 SLAIN2Q9P270 581 aa10.44□□□□□ -0.74
CTHRC1-203ENST00000520337 LTN1O94822 1766 aa10.44□□□□□ -0.74
CTHRC1-203ENST00000520337 CDK12Q9NYV4 1490 aaPredicted RBP10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 ZBED9Q6R2W3 1325 aa10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 DHX9Q08211 1270 aaKnown RBP10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 RRS1Q15050 365 aaKnown RBP10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 BRINP3Q76B58 766 aa10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 EPS8L1Q8TE68 723 aa10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 PGPEP1Q9NXJ5 209 aa10.43□□□□□ -0.74
CTHRC1-203ENST00000520337 PXDNQ92626 1479 aa10.42□□□□□ -0.74
CTHRC1-203ENST00000520337 NBPF20Q3BBV1 942 aa10.42□□□□□ -0.74
CTHRC1-203ENST00000520337 NUTM2GQ5VZR2 741 aa10.42□□□□□ -0.74
CTHRC1-203ENST00000520337 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
CTHRC1-203ENST00000520337 ADAM32Q8TC27 787 aa10.42□□□□□ -0.74
CTHRC1-203ENST00000520337 KCTD15Q96SI1 283 aaPredicted RBP10.42□□□□□ -0.74
CTHRC1-203ENST00000520337 OCSTAMPQ9BR26 566 aa10.42□□□□□ -0.74
CTHRC1-203ENST00000520337 SBNO1A3KN83 1393 aa10.41□□□□□ -0.74
CTHRC1-203ENST00000520337 NHSL1Q5SYE7 1610 aa10.41□□□□□ -0.74
CTHRC1-203ENST00000520337 SENP3-EIF4A1A0A087X0R7 540 aa10.41□□□□□ -0.74
CTHRC1-203ENST00000520337 TSEN34Q9BSV6 310 aaKnown RBP10.41□□□□□ -0.74
CTHRC1-203ENST00000520337 NFAT5O94916 1531 aa10.41□□□□□ -0.74
CTHRC1-203ENST00000520337 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
CTHRC1-203ENST00000520337 MAP3K19Q56UN5 1328 aa10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 NPHP3Q7Z494 1330 aa10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 SLIT3O75094 1523 aa10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 PPM1GO15355 546 aaPredicted RBP10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 DIAPH1O60610 1272 aaKnown RBP10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 IL13P35225 146 aa10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 PPP1R26Q5T8A7 1209 aaPredicted RBP10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 RGPD1P0DJD0 1748 aa10.4□□□□□ -0.74
CTHRC1-203ENST00000520337 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.75
CTHRC1-203ENST00000520337 RGPD5Q99666 1765 aa10.39□□□□□ -0.75
CTHRC1-203ENST00000520337 USP19O94966 1318 aa10.39□□□□□ -0.75
CTHRC1-203ENST00000520337 SOCS7O14512 581 aa10.39□□□□□ -0.75
CTHRC1-203ENST00000520337 CCDC146Q8IYE0 955 aa10.39□□□□□ -0.75
CTHRC1-203ENST00000520337 TRIM34Q9BYJ4 488 aa10.39□□□□□ -0.75
CTHRC1-203ENST00000520337 MED1Q15648 1581 aaPredicted RBP10.39□□□□□ -0.75
CTHRC1-203ENST00000520337 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 LOC100996750A0A140TA64 210 aa10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 U2AF1L5P0DN76 240 aaPredicted RBP10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 BMP2P12643 396 aa10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 LORP23490 312 aaPredicted RBP10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 U2AF1Q01081 240 aaKnown RBP eCLIP10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 C6orf118Q5T5N4 469 aa10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 KRTAP4-6Q9BYQ5 205 aa10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 NUDCQ9Y266 331 aa10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 KIF24Q5T7B8 1368 aa10.38□□□□□ -0.75
CTHRC1-203ENST00000520337 SPATA31A3Q5VYP0 1347 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 RGPD2P0DJD1 1756 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 APAF1O14727 1248 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 INTS6LQ5JSJ4 861 aaKnown RBP10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 TNS3Q68CZ2 1445 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 Q6ZVU0 165 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 BANK1Q8NDB2 785 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 RUNDC1Q96C34 613 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 PLEKHF1Q96S99 279 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 ROBO1Q9Y6N7 1651 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 DLG5Q8TDM6 1919 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 COL18A1P39060 1754 aa10.37□□□□□ -0.75
CTHRC1-203ENST00000520337 IQSEC2Q5JU85 1478 aa10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 H3BM21 787 aa10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 U2SURPO15042 1029 aaKnown RBP10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 MAN1A2O60476 641 aa10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 GCP02774 474 aa10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 EIF4A2Q14240 407 aaKnown RBP10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 DZIP3Q86Y13 1208 aaKnown RBP10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 KCNH5Q8NCM2 988 aa10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 IRF7Q92985 503 aa10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 FLT4P35916 1363 aa10.36□□□□□ -0.75
CTHRC1-203ENST00000520337 ZNF521Q96K83 1311 aa10.35□□□□□ -0.75
CTHRC1-203ENST00000520337 HOXC9P31274 260 aa10.35□□□□□ -0.75
CTHRC1-203ENST00000520337 ARHGEF25Q86VW2 580 aa10.35□□□□□ -0.75
CTHRC1-203ENST00000520337 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
CTHRC1-203ENST00000520337 AMPHP49418 695 aa10.34□□□□□ -0.75
CTHRC1-203ENST00000520337 TCP11L2Q8N4U5 519 aa10.34□□□□□ -0.75
CTHRC1-203ENST00000520337 NGEFQ8N5V2 710 aa10.34□□□□□ -0.75
CTHRC1-203ENST00000520337 IP6K1Q92551 441 aa10.34□□□□□ -0.75
CTHRC1-203ENST00000520337 GJD4Q96KN9 370 aaPredicted RBP10.34□□□□□ -0.75
CTHRC1-203ENST00000520337 RTL1A6NKG5 1358 aa10.34□□□□□ -0.75
CTHRC1-203ENST00000520337 AHDC1Q5TGY3 1603 aaPredicted RBP10.33□□□□□ -0.76
CTHRC1-203ENST00000520337 ZBBXA8MT70 800 aa10.33□□□□□ -0.76
CTHRC1-203ENST00000520337 APBB1O00213 710 aa10.33□□□□□ -0.76
CTHRC1-203ENST00000520337 SEPT12Q8IYM1 358 aa10.33□□□□□ -0.76
CTHRC1-203ENST00000520337 ARHGEF10O15013 1369 aa10.33□□□□□ -0.76
CTHRC1-203ENST00000520337 ESPNB1AK53 854 aa10.32□□□□□ -0.76
CTHRC1-203ENST00000520337 HMOX1P09601 288 aa10.32□□□□□ -0.76
CTHRC1-203ENST00000520337 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
CTHRC1-203ENST00000520337 PRKAR2BP31323 418 aa10.31□□□□□ -0.76
CTHRC1-203ENST00000520337 TMPOP42166 694 aaKnown RBP10.31□□□□□ -0.76
CTHRC1-203ENST00000520337 AEBP1Q8IUX7 1158 aa10.31□□□□□ -0.76
CTHRC1-203ENST00000520337 ZNF592Q92610 1267 aa10.31□□□□□ -0.76
CTHRC1-203ENST00000520337 PHACTR3Q96KR7 559 aa10.31□□□□□ -0.76
CTHRC1-203ENST00000520337 PNNQ9H307 717 aaKnown RBP10.31□□□□□ -0.76
CTHRC1-203ENST00000520337 RRP7AQ9Y3A4 280 aaKnown RBP10.31□□□□□ -0.76
CTHRC1-203ENST00000520337 IGSF1Q8N6C5 1336 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms