RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 F6X3S4 739 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 PDE8AO60658 829 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 BBOX1O75936 387 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 CCDC152Q4G0S7 254 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 SLC4A10Q6U841 1118 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 UBE3BQ7Z3V4 1068 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 LARGE2Q8N3Y3 721 aa18.04■□□□□ 0.48
VEGFA-221ENST00000520265 DICER1Q9UPY3 1922 aaKnown RBP18.04■□□□□ 0.48
VEGFA-221ENST00000520265 TAF1P21675 1872 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 PPIP5K2O43314 1243 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 GRIPAP1Q4V328 841 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 MPNDQ8N594 471 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 PSMD1Q99460 953 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 BCL2L13Q9BXK5 485 aa18.03■□□□□ 0.48
VEGFA-221ENST00000520265 DDNO94850 711 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-221ENST00000520265 SF3B3Q15393 1217 aaKnown RBP18.02■□□□□ 0.48
VEGFA-221ENST00000520265 CELF1Q92879 486 aaKnown RBP18.02■□□□□ 0.48
VEGFA-221ENST00000520265 CTSWP56202 376 aa18.01■□□□□ 0.47
VEGFA-221ENST00000520265 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.478e-7■□□□□ 10.9
VEGFA-221ENST00000520265 AOC3Q16853 763 aa18.01■□□□□ 0.47
VEGFA-221ENST00000520265 SP8Q8IXZ3 490 aa18.01■□□□□ 0.47
VEGFA-221ENST00000520265 NIM1KQ8IY84 436 aa18.01■□□□□ 0.47
VEGFA-221ENST00000520265 SUPT20HQ8NEM7 779 aa18.01■□□□□ 0.47
VEGFA-221ENST00000520265 ZNF541Q9H0D2 1346 aa18■□□□□ 0.47
VEGFA-221ENST00000520265 TOMM70O94826 608 aa18■□□□□ 0.47
VEGFA-221ENST00000520265 VEGFAP15692 232 aaPredicted RBP18■□□□□ 0.47
VEGFA-221ENST00000520265 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
VEGFA-221ENST00000520265 GCKRQ14397 625 aa18■□□□□ 0.47
VEGFA-221ENST00000520265 TMC4Q7Z404 712 aa18■□□□□ 0.47
VEGFA-221ENST00000520265 LINS1Q8NG48 757 aa18■□□□□ 0.47
VEGFA-221ENST00000520265 SEC31BQ9NQW1 1179 aa18■□□□□ 0.47
VEGFA-221ENST00000520265 GJA3Q9Y6H8 435 aa18■□□□□ 0.47
VEGFA-221ENST00000520265 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
VEGFA-221ENST00000520265 SMC4Q9NTJ3 1288 aa17.99■□□□□ 0.47
VEGFA-221ENST00000520265 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
VEGFA-221ENST00000520265 CHMP3Q9Y3E7 222 aa17.99■□□□□ 0.47
VEGFA-221ENST00000520265 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
VEGFA-221ENST00000520265 RPS8P62241 208 aaKnown RBP17.98■□□□□ 0.47
VEGFA-221ENST00000520265 ANKRD18AQ8IVF6 992 aa17.98■□□□□ 0.47
VEGFA-221ENST00000520265 CDC5LQ99459 802 aaKnown RBP17.98■□□□□ 0.47
VEGFA-221ENST00000520265 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
VEGFA-221ENST00000520265 SNED1Q8TER0 1413 aa17.97■□□□□ 0.47
VEGFA-221ENST00000520265 RIMBP2O15034 1052 aa17.96■□□□□ 0.47
VEGFA-221ENST00000520265 GPSM2P81274 684 aa17.96■□□□□ 0.47
VEGFA-221ENST00000520265 MRPL50Q8N5N7 158 aaKnown RBP17.96■□□□□ 0.47
VEGFA-221ENST00000520265 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
VEGFA-221ENST00000520265 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
VEGFA-221ENST00000520265 MYH3P11055 1940 aa17.96■□□□□ 0.47
VEGFA-221ENST00000520265 IQCA1LA6NCM1 817 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 G3V3G9 751 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 H7C1W4 665 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 BEND3Q5T5X7 828 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 DCAF8Q5TAQ9 597 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 RBM46Q8TBY0 533 aaKnown RBP17.95■□□□□ 0.46
VEGFA-221ENST00000520265 SRCIN1Q9C0H9 1055 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 GREM2Q9H772 168 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 COL4A1P02462 1669 aa17.95■□□□□ 0.46
VEGFA-221ENST00000520265 SPEF2Q9C093 1822 aa17.94■□□□□ 0.46
VEGFA-221ENST00000520265 LMOD1P29536 600 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-221ENST00000520265 FAM161AQ3B820 660 aa17.94■□□□□ 0.46
VEGFA-221ENST00000520265 EAPPQ56P03 285 aaPredicted RBP17.94■□□□□ 0.46
VEGFA-221ENST00000520265 TTLL11Q8NHH1 800 aa17.94■□□□□ 0.46
VEGFA-221ENST00000520265 WDR90Q96KV7 1748 aa17.94■□□□□ 0.46
VEGFA-221ENST00000520265 LRRC37AA6NMS7 1700 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 FZD9O00144 591 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 UFL1O94874 794 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 IGHMBP2P38935 993 aaKnown RBP17.93■□□□□ 0.46
VEGFA-221ENST00000520265 WASHC4Q2M389 1173 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 SMC1BQ8NDV3 1235 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 GPR101Q96P66 508 aaPredicted RBP17.93■□□□□ 0.46
VEGFA-221ENST00000520265 EYA3Q99504 573 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 PTPRCP08575 1304 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 COL4A5P29400 1685 aa17.93■□□□□ 0.46
VEGFA-221ENST00000520265 GRM8O00222 908 aa17.92■□□□□ 0.46
VEGFA-221ENST00000520265 TAF7LQ5H9L4 462 aa17.92■□□□□ 0.46
VEGFA-221ENST00000520265 GPC2Q8N158 579 aa17.92■□□□□ 0.46
VEGFA-221ENST00000520265 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
VEGFA-221ENST00000520265 RTFDC1Q9BY42 306 aaPredicted RBP17.92■□□□□ 0.46
VEGFA-221ENST00000520265 HACL1Q9UJ83 578 aa17.92■□□□□ 0.46
VEGFA-221ENST00000520265 GGA1Q9UJY5 639 aa17.92■□□□□ 0.46
VEGFA-221ENST00000520265 CLEC11AQ9Y240 323 aa17.92■□□□□ 0.46
VEGFA-221ENST00000520265 ALDH1L1O75891 902 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 RAD17O75943 681 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 HSPA6P17066 643 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 ITGA6P23229 1130 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 KIAA2012Q0VF49 1180 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 ALDH1L2Q3SY69 923 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 VPS33BQ9H267 617 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 DBNDD1Q9H9R9 158 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
VEGFA-221ENST00000520265 DOK7Q18PE1 504 aa17.9■□□□□ 0.46
VEGFA-221ENST00000520265 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
VEGFA-221ENST00000520265 ZC3H12CQ9C0D7 883 aaKnown RBP17.9■□□□□ 0.46
VEGFA-221ENST00000520265 POLLQ9UGP5 575 aa17.9■□□□□ 0.46
VEGFA-221ENST00000520265 DUOX1Q9NRD9 1551 aa17.89■□□□□ 0.45
VEGFA-221ENST00000520265 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
VEGFA-221ENST00000520265 POTECB2RU33 542 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms