RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 ALDH1B1P30837 517 aa14.99□□□□□ -0.01
HPS4-218ENST00000519774 ARHGAP27Q6ZUM4 889 aa14.99□□□□□ -0.01
HPS4-218ENST00000519774 C9orf78Q9NZ63 289 aaPredicted RBP14.99□□□□□ -0.01
HPS4-218ENST00000519774 TAF1P21675 1872 aa14.99□□□□□ -0.01
HPS4-218ENST00000519774 ABCC4O15439 1325 aa14.98□□□□□ -0.01
HPS4-218ENST00000519774 GRM8O00222 908 aa14.98□□□□□ -0.01
HPS4-218ENST00000519774 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
HPS4-218ENST00000519774 HOXA10P31260 410 aaPredicted RBP14.98□□□□□ -0.01
HPS4-218ENST00000519774 DDX46Q7L014 1031 aaKnown RBP14.98□□□□□ -0.01
HPS4-218ENST00000519774 CCDC85AQ96PX6 553 aaPredicted RBP14.98□□□□□ -0.01
HPS4-218ENST00000519774 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
HPS4-218ENST00000519774 TRIM27P14373 513 aa14.97□□□□□ -0.01
HPS4-218ENST00000519774 CASP7P55210 303 aa14.97□□□□□ -0.01
HPS4-218ENST00000519774 SF3B3Q15393 1217 aaKnown RBP14.97□□□□□ -0.01
HPS4-218ENST00000519774 ZKSCAN2Q63HK3 967 aa14.97□□□□□ -0.01
HPS4-218ENST00000519774 CLUAP1Q96AJ1 413 aa14.97□□□□□ -0.01
HPS4-218ENST00000519774 CRAMP1Q96RY5 1269 aa14.97□□□□□ -0.01
HPS4-218ENST00000519774 CHD4Q14839 1912 aa14.97□□□□□ -0.01
HPS4-218ENST00000519774 PPEF1O14829 653 aaPredicted RBP14.96□□□□□ -0.01
HPS4-218ENST00000519774 CCT4P50991 539 aaKnown RBP14.96□□□□□ -0.01
HPS4-218ENST00000519774 CTSWP56202 376 aa14.96□□□□□ -0.01
HPS4-218ENST00000519774 OLFM4Q6UX06 510 aa14.96□□□□□ -0.01
HPS4-218ENST00000519774 ATF7IPQ6VMQ6 1270 aa14.96□□□□□ -0.01
HPS4-218ENST00000519774 ARHGAP45Q92619 1136 aa14.96□□□□□ -0.01
HPS4-218ENST00000519774 RCAN3Q9UKA8 241 aa14.96□□□□□ -0.01
HPS4-218ENST00000519774 RASSF7Q02833 373 aa14.95□□□□□ -0.02
HPS4-218ENST00000519774 GRAPQ13588 217 aa14.95□□□□□ -0.02
HPS4-218ENST00000519774 CCDC152Q4G0S7 254 aa14.95□□□□□ -0.02
HPS4-218ENST00000519774 SLC51AQ86UW1 340 aa14.95□□□□□ -0.02
HPS4-218ENST00000519774 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
HPS4-218ENST00000519774 COL4A1P02462 1669 aa14.95□□□□□ -0.02
HPS4-218ENST00000519774 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
HPS4-218ENST00000519774 NBPF7P0C2Y1 421 aaPredicted RBP14.94□□□□□ -0.02
HPS4-218ENST00000519774 CCDC93Q567U6 631 aa14.94□□□□□ -0.02
HPS4-218ENST00000519774 CELF1Q92879 486 aaKnown RBP14.94□□□□□ -0.02
HPS4-218ENST00000519774 PLA2G12BQ9BX93 195 aa14.94□□□□□ -0.02
HPS4-218ENST00000519774 SEC31BQ9NQW1 1179 aa14.94□□□□□ -0.02
HPS4-218ENST00000519774 FER1L6Q2WGJ9 1857 aa14.94□□□□□ -0.02
HPS4-218ENST00000519774 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
HPS4-218ENST00000519774 TTLL11Q8NHH1 800 aa14.93□□□□□ -0.02
HPS4-218ENST00000519774 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
HPS4-218ENST00000519774 SUCLG2Q96I99 432 aa14.93□□□□□ -0.02
HPS4-218ENST00000519774 GREM2Q9H772 168 aa14.93□□□□□ -0.02
HPS4-218ENST00000519774 CHMP3Q9Y3E7 222 aa14.93□□□□□ -0.02
HPS4-218ENST00000519774 NFKBIEO00221 500 aa14.92□□□□□ -0.02
HPS4-218ENST00000519774 FAM161AQ3B820 660 aa14.92□□□□□ -0.02
HPS4-218ENST00000519774 EPHA10Q5JZY3 1008 aa14.92□□□□□ -0.02
HPS4-218ENST00000519774 FTSJ3Q8IY81 847 aaKnown RBP14.92□□□□□ -0.02
HPS4-218ENST00000519774 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
HPS4-218ENST00000519774 UTYO14607 1347 aa14.92□□□□□ -0.02
HPS4-218ENST00000519774 CCDC88AQ3V6T2 1871 aa14.91□□□□□ -0.02
HPS4-218ENST00000519774 BBOX1O75936 387 aa14.91□□□□□ -0.02
HPS4-218ENST00000519774 FOXO4P98177 505 aa14.91□□□□□ -0.02
HPS4-218ENST00000519774 INTS3Q68E01 1043 aaKnown RBP14.91□□□□□ -0.02
HPS4-218ENST00000519774 TMX4Q9H1E5 349 aaPredicted RBP14.91□□□□□ -0.02
HPS4-218ENST00000519774 TAOK3Q9H2K8 898 aa14.91□□□□□ -0.02
HPS4-218ENST00000519774 ATP6V0A2Q9Y487 856 aa14.91□□□□□ -0.02
HPS4-218ENST00000519774 LRRC37AA6NMS7 1700 aa14.91□□□□□ -0.02
HPS4-218ENST00000519774 SBF1O95248 1867 aa14.91□□□□□ -0.02
HPS4-218ENST00000519774 RTL9Q8NET4 1388 aa14.9□□□□□ -0.02
HPS4-218ENST00000519774 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
HPS4-218ENST00000519774 RPS8P62241 208 aaKnown RBP14.9□□□□□ -0.02
HPS4-218ENST00000519774 LMBR1LQ6UX01 489 aa14.9□□□□□ -0.02
HPS4-218ENST00000519774 ANKRD18AQ8IVF6 992 aa14.9□□□□□ -0.02
HPS4-218ENST00000519774 DZIP1LQ8IYY4 767 aaKnown RBP14.9□□□□□ -0.02
HPS4-218ENST00000519774 TMEM57Q8N5G2 664 aa14.9□□□□□ -0.02
HPS4-218ENST00000519774 CDC5LQ99459 802 aaKnown RBP14.9□□□□□ -0.02
HPS4-218ENST00000519774 GOLGB1Q14789 3259 aaKnown RBP14.89□□□□□ -0.03
HPS4-218ENST00000519774 PLIN1O60240 522 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 CSF1RP07333 972 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 ITGA6P23229 1130 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 YY1P25490 414 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 C9orf131Q5VYM1 1079 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 CC2D2BQ6DHV5 1058 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 TMC4Q7Z404 712 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 SP8Q8IXZ3 490 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 RTKN2Q8IZC4 609 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 MEIS3Q99687 375 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 BICC1Q9H694 974 aaKnown RBP14.89□□□□□ -0.03
HPS4-218ENST00000519774 RNF181Q9P0P0 153 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 LTBP3Q9NS15 1303 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
HPS4-218ENST00000519774 RLBP1P12271 317 aa14.88□□□□□ -0.03
HPS4-218ENST00000519774 FKBP4Q02790 459 aaKnown RBP eCLIP14.88□□□□□ -0.03
HPS4-218ENST00000519774 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
HPS4-218ENST00000519774 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
HPS4-218ENST00000519774 KAZALD1Q96I82 304 aa14.88□□□□□ -0.03
HPS4-218ENST00000519774 SNED1Q8TER0 1413 aa14.88□□□□□ -0.03
HPS4-218ENST00000519774 ANKRD18BA2A2Z9 1011 aa14.87□□□□□ -0.03
HPS4-218ENST00000519774 LMNB1P20700 586 aa14.87□□□□□ -0.03
HPS4-218ENST00000519774 IGHMBP2P38935 993 aaKnown RBP14.87□□□□□ -0.03
HPS4-218ENST00000519774 PRELPP51888 382 aa14.87□□□□□ -0.03
HPS4-218ENST00000519774 IFIT5Q13325 482 aaKnown RBP14.87□□□□□ -0.03
HPS4-218ENST00000519774 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
HPS4-218ENST00000519774 ANKRD44Q8N8A2 993 aa14.87□□□□□ -0.03
HPS4-218ENST00000519774 ZNF277Q9NRM2 450 aaPredicted RBP14.87□□□□□ -0.03
HPS4-218ENST00000519774 LRRFIP2Q9Y608 721 aaKnown RBP14.87□□□□□ -0.03
HPS4-218ENST00000519774 GNAI3P08754 354 aa14.86□□□□□ -0.03
HPS4-218ENST00000519774 MS4A1P11836 297 aa14.86□□□□□ -0.03
HPS4-218ENST00000519774 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms