RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 CSF1RP07333 972 aa21.79■■□□□ 1.08
IGHV3-52-201ENST00000519770 POLA2Q14181 598 aa21.79■■□□□ 1.08
IGHV3-52-201ENST00000519770 TTLL11Q8NHH1 800 aa21.79■■□□□ 1.08
IGHV3-52-201ENST00000519770 G3BP1Q13283 466 aaKnown RBP eCLIP21.78■■□□□ 1.08
IGHV3-52-201ENST00000519770 CCDC85AQ96PX6 553 aaPredicted RBP21.78■■□□□ 1.08
IGHV3-52-201ENST00000519770 MTFR1LQ9H019 292 aa21.78■■□□□ 1.08
IGHV3-52-201ENST00000519770 DCTPP1Q9H773 170 aa21.77■■□□□ 1.08
IGHV3-52-201ENST00000519770 PSDA5PKW4 1024 aaPredicted RBP21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 RAB11FIP3O75154 756 aa21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 SF3B3Q15393 1217 aaKnown RBP21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 FAM161AQ3B820 660 aa21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 ERC1Q8IUD2 1116 aa21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 RPGRQ92834 1020 aaKnown RBP21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 CDC5LQ99459 802 aaKnown RBP21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 PDGFDQ9GZP0 370 aaPredicted RBP21.76■■□□□ 1.07
IGHV3-52-201ENST00000519770 ABCC12Q96J65 1359 aa21.75■■□□□ 1.07
IGHV3-52-201ENST00000519770 ZBTB7AO95365 584 aa21.75■■□□□ 1.07
IGHV3-52-201ENST00000519770 ITGA6P23229 1130 aa21.75■■□□□ 1.07
IGHV3-52-201ENST00000519770 PDE6BP35913 854 aa21.75■■□□□ 1.07
IGHV3-52-201ENST00000519770 BRIP1Q9BX63 1249 aa21.75■■□□□ 1.07
IGHV3-52-201ENST00000519770 GREM2Q9H772 168 aa21.75■■□□□ 1.07
IGHV3-52-201ENST00000519770 MYH3P11055 1940 aa21.74■■□□□ 1.07
IGHV3-52-201ENST00000519770 LAMB2P55268 1798 aa21.74■■□□□ 1.07
IGHV3-52-201ENST00000519770 RIC1Q4ADV7 1423 aa21.74■■□□□ 1.07
IGHV3-52-201ENST00000519770 DDX46Q7L014 1031 aaKnown RBP21.74■■□□□ 1.07
IGHV3-52-201ENST00000519770 SMC5Q8IY18 1101 aa21.74■■□□□ 1.07
IGHV3-52-201ENST00000519770 COPRSQ9NQ92 184 aa21.74■■□□□ 1.07
IGHV3-52-201ENST00000519770 KDM2BQ8NHM5 1336 aa21.74■■□□□ 1.07
IGHV3-52-201ENST00000519770 IGHMBP2P38935 993 aaKnown RBP21.73■■□□□ 1.07
IGHV3-52-201ENST00000519770 FBXO3Q9UK99 471 aa21.73■■□□□ 1.07
IGHV3-52-201ENST00000519770 PDZRN3Q9UPQ7 1066 aa21.73■■□□□ 1.07
IGHV3-52-201ENST00000519770 ATF5Q9Y2D1 282 aaPredicted RBP21.73■■□□□ 1.07
IGHV3-52-201ENST00000519770 EXOC6BQ9Y2D4 811 aa21.73■■□□□ 1.07
IGHV3-52-201ENST00000519770 RTL9Q8NET4 1388 aa21.73■■□□□ 1.07
IGHV3-52-201ENST00000519770 APBB1O00213 710 aa21.72■■□□□ 1.07
IGHV3-52-201ENST00000519770 ANKRD45Q5TZF3 282 aa21.72■■□□□ 1.07
IGHV3-52-201ENST00000519770 RBM17Q96I25 401 aaKnown RBP21.72■■□□□ 1.07
IGHV3-52-201ENST00000519770 MPHOSPH8Q99549 860 aa21.72■■□□□ 1.07
IGHV3-52-201ENST00000519770 SIL1Q9H173 461 aa21.72■■□□□ 1.07
IGHV3-52-201ENST00000519770 NOP58Q9Y2X3 529 aaKnown RBP21.72■■□□□ 1.07
IGHV3-52-201ENST00000519770 DDX60Q8IY21 1712 aaKnown RBP21.72■■□□□ 1.07
IGHV3-52-201ENST00000519770 ANKRD18AQ8IVF6 992 aa21.71■■□□□ 1.07
IGHV3-52-201ENST00000519770 KIF1BPQ96EK5 621 aa21.71■■□□□ 1.07
IGHV3-52-201ENST00000519770 LRRCC1Q9C099 1032 aa21.71■■□□□ 1.07
IGHV3-52-201ENST00000519770 CNNM1Q9NRU3 951 aa21.71■■□□□ 1.07
IGHV3-52-201ENST00000519770 PA2G4Q9UQ80 394 aaKnown RBP21.71■■□□□ 1.07
IGHV3-52-201ENST00000519770 RFX5P48382 616 aaPredicted RBP21.7■■□□□ 1.06
IGHV3-52-201ENST00000519770 PTPN12Q05209 780 aaKnown RBP21.7■■□□□ 1.06
IGHV3-52-201ENST00000519770 LDHAL6AQ6ZMR3 332 aa21.7■■□□□ 1.06
IGHV3-52-201ENST00000519770 EYA2O00167 538 aa21.69■■□□□ 1.06
IGHV3-52-201ENST00000519770 IL15P40933 162 aaPredicted RBP21.69■■□□□ 1.06
IGHV3-52-201ENST00000519770 KLHDC4Q8TBB5 520 aa21.69■■□□□ 1.06
IGHV3-52-201ENST00000519770 H0YIN7 160 aa21.68■■□□□ 1.06
IGHV3-52-201ENST00000519770 CIAO1O76071 339 aa21.68■■□□□ 1.06
IGHV3-52-201ENST00000519770 ZNF594Q96JF6 807 aaPredicted RBP21.68■■□□□ 1.06
IGHV3-52-201ENST00000519770 BCL11AQ9H165 835 aa21.68■■□□□ 1.06
IGHV3-52-201ENST00000519770 CASZ1Q86V15 1759 aa21.68■■□□□ 1.06
IGHV3-52-201ENST00000519770 NRXN2Q9P2S2 1712 aa21.67■■□□□ 1.06
IGHV3-52-201ENST00000519770 NUCB1Q02818 461 aa21.67■■□□□ 1.06
IGHV3-52-201ENST00000519770 C3orf67Q6ZVT6 689 aa21.67■■□□□ 1.06
IGHV3-52-201ENST00000519770 CHD1LQ86WJ1 897 aa21.67■■□□□ 1.06
IGHV3-52-201ENST00000519770 NPR1P16066 1061 aa21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 RPS8P62241 208 aaKnown RBP21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 CRY2Q49AN0 593 aa21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 CLASRPQ8N2M8 674 aaKnown RBP21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 TMX4Q9H1E5 349 aaPredicted RBP21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 SPON1Q9HCB6 807 aa21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 SEC31BQ9NQW1 1179 aa21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 CEP126Q9P2H0 1117 aa21.66■■□□□ 1.06
IGHV3-52-201ENST00000519770 KLRG2A4D1S0 409 aaPredicted RBP21.65■■□□□ 1.06
IGHV3-52-201ENST00000519770 ALDH1B1P30837 517 aa21.65■■□□□ 1.06
IGHV3-52-201ENST00000519770 GRAPQ13588 217 aa21.65■■□□□ 1.06
IGHV3-52-201ENST00000519770 C2CD5Q86YS7 1000 aa21.65■■□□□ 1.06
IGHV3-52-201ENST00000519770 GRAPLQ8TC17 118 aaPredicted RBP21.65■■□□□ 1.06
IGHV3-52-201ENST00000519770 MROH5Q6ZUA9 1318 aa21.64■■□□□ 1.05
IGHV3-52-201ENST00000519770 METTL24Q5JXM2 366 aa21.64■■□□□ 1.05
IGHV3-52-201ENST00000519770 MASTLQ96GX5 879 aa21.64■■□□□ 1.05
IGHV3-52-201ENST00000519770 CRAMP1Q96RY5 1269 aa21.64■■□□□ 1.05
IGHV3-52-201ENST00000519770 LNPKQ9C0E8 428 aa21.64■■□□□ 1.05
IGHV3-52-201ENST00000519770 BBOX1O75936 387 aa21.63■■□□□ 1.05
IGHV3-52-201ENST00000519770 HOXA10P31260 410 aaPredicted RBP21.63■■□□□ 1.05
IGHV3-52-201ENST00000519770 TMC4Q7Z404 712 aa21.63■■□□□ 1.05
IGHV3-52-201ENST00000519770 ZNF622Q969S3 477 aaKnown RBP eCLIP21.63■■□□□ 1.05
IGHV3-52-201ENST00000519770 BSDC1Q9NW68 430 aaPredicted RBP21.63■■□□□ 1.05
IGHV3-52-201ENST00000519770 AKAP2Q9Y2D5 859 aa21.63■■□□□ 1.05
IGHV3-52-201ENST00000519770 SOCS7O14512 581 aa21.62■■□□□ 1.05
IGHV3-52-201ENST00000519770 LRRC24Q50LG9 513 aa21.62■■□□□ 1.05
IGHV3-52-201ENST00000519770 TNRC6CQ9HCJ0 1690 aaKnown RBP21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 IFIT2P09913 472 aaKnown RBP21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 SRGNP10124 158 aa21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 STYK1Q6J9G0 422 aa21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 CELF1Q92879 486 aaKnown RBP21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 CNKSR1Q969H4 720 aa21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 PUS3Q9BZE2 481 aaKnown RBP21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 IL1RAPL2Q9NP60 686 aa21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 PPP1R1BQ9UD71 204 aaPredicted RBP21.61■■□□□ 1.05
IGHV3-52-201ENST00000519770 SMARCA5O60264 1052 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 674.8 ms