RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
CSMD3-209ENST00000519485 BTBD11A6QL63 1104 aa6.84□□□□□ -1.31
CSMD3-209ENST00000519485 DEAF1O75398 565 aaPredicted RBP6.84□□□□□ -1.31
CSMD3-209ENST00000519485 RASA1P20936 1047 aa6.84□□□□□ -1.31
CSMD3-209ENST00000519485 NRLP54845 237 aa6.84□□□□□ -1.31
CSMD3-209ENST00000519485 MCTP1Q6DN14 999 aa6.84□□□□□ -1.31
CSMD3-209ENST00000519485 ELMSAN1Q6PJG2 1045 aa6.84□□□□□ -1.31
CSMD3-209ENST00000519485 KRTAP9-9Q9BYP9 154 aa6.84□□□□□ -1.31
CSMD3-209ENST00000519485 KRTAP9-4Q9BYQ2 154 aa6.84□□□□□ -1.31
CSMD3-209ENST00000519485 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
CSMD3-209ENST00000519485 EGFRP00533 1210 aa6.83□□□□□ -1.32
CSMD3-209ENST00000519485 ARID4AP29374 1257 aaPredicted RBP6.83□□□□□ -1.32
CSMD3-209ENST00000519485 IDH3AP50213 366 aa6.83□□□□□ -1.32
CSMD3-209ENST00000519485 ARSDP51689 593 aa6.83□□□□□ -1.32
CSMD3-209ENST00000519485 CHMP7Q8WUX9 453 aaPredicted RBP6.83□□□□□ -1.32
CSMD3-209ENST00000519485 IFT43Q96FT9 208 aa6.83□□□□□ -1.32
CSMD3-209ENST00000519485 MAFBQ9Y5Q3 323 aaPredicted RBP6.83□□□□□ -1.32
CSMD3-209ENST00000519485 COL17A1Q9UMD9 1497 aaPredicted RBP6.82□□□□□ -1.32
CSMD3-209ENST00000519485 HOXD8P13378 290 aaPredicted RBP6.82□□□□□ -1.32
CSMD3-209ENST00000519485 PLAURQ03405 335 aa6.82□□□□□ -1.32
CSMD3-209ENST00000519485 Q6ZS46 218 aa6.82□□□□□ -1.32
CSMD3-209ENST00000519485 DCAF11Q8TEB1 546 aa6.82□□□□□ -1.32
CSMD3-209ENST00000519485 UBTFP17480 764 aaKnown RBP6.81□□□□□ -1.32
CSMD3-209ENST00000519485 CD97P48960 835 aa6.81□□□□□ -1.32
CSMD3-209ENST00000519485 PTK7Q13308 1070 aa6.81□□□□□ -1.32
CSMD3-209ENST00000519485 MAP4K3Q8IVH8 894 aa6.81□□□□□ -1.32
CSMD3-209ENST00000519485 MYO19Q96H55 970 aa6.81□□□□□ -1.32
CSMD3-209ENST00000519485 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
CSMD3-209ENST00000519485 AKTIPQ9H8T0 292 aa6.81□□□□□ -1.32
CSMD3-209ENST00000519485 FOXO3O43524 673 aa6.8□□□□□ -1.32
CSMD3-209ENST00000519485 RARAP10276 462 aa6.8□□□□□ -1.32
CSMD3-209ENST00000519485 FSTP19883 344 aa6.8□□□□□ -1.32
CSMD3-209ENST00000519485 TARSP26639 723 aaKnown RBP6.8□□□□□ -1.32
CSMD3-209ENST00000519485 LARP1Q6PKG0 1096 aaKnown RBP6.8□□□□□ -1.32
CSMD3-209ENST00000519485 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
CSMD3-209ENST00000519485 QTRT2Q9H974 415 aaKnown RBP6.8□□□□□ -1.32
CSMD3-209ENST00000519485 TLR7Q9NYK1 1049 aaKnown RBP6.8□□□□□ -1.32
CSMD3-209ENST00000519485 FAM196BA6NMK8 535 aa6.79□□□□□ -1.32
CSMD3-209ENST00000519485 F8W735 103 aaPredicted RBP6.79□□□□□ -1.32
CSMD3-209ENST00000519485 MICAL2O94851 1124 aa6.79□□□□□ -1.32
CSMD3-209ENST00000519485 C11orf91Q3C1V1 193 aa6.79□□□□□ -1.32
CSMD3-209ENST00000519485 CACTIN-AS1Q8N1I8 211 aa6.79□□□□□ -1.32
CSMD3-209ENST00000519485 HINFPQ9BQA5 517 aa6.79□□□□□ -1.32
CSMD3-209ENST00000519485 KLK14Q9P0G3 267 aa6.79□□□□□ -1.32
CSMD3-209ENST00000519485 TFIP11Q9UBB9 837 aaKnown RBP6.79□□□□□ -1.32
CSMD3-209ENST00000519485 SASH3O75995 380 aa6.78□□□□□ -1.32
CSMD3-209ENST00000519485 WEE1P30291 646 aa6.78□□□□□ -1.32
CSMD3-209ENST00000519485 SOX18P35713 384 aa6.78□□□□□ -1.32
CSMD3-209ENST00000519485 DGKZQ13574 1117 aa6.78□□□□□ -1.32
CSMD3-209ENST00000519485 KANK4Q5T7N3 995 aaPredicted RBP6.78□□□□□ -1.32
CSMD3-209ENST00000519485 KRT25Q7Z3Z0 450 aa6.78□□□□□ -1.32
CSMD3-209ENST00000519485 FMNL2Q96PY5 1086 aa6.78□□□□□ -1.32
CSMD3-209ENST00000519485 PCMTD2Q9NV79 361 aa6.78□□□□□ -1.32
CSMD3-209ENST00000519485 GSC2O15499 205 aa6.77□□□□□ -1.33
CSMD3-209ENST00000519485 PAX4O43316 350 aa6.77□□□□□ -1.33
CSMD3-209ENST00000519485 MLLT1Q03111 559 aaPredicted RBP6.77□□□□□ -1.33
CSMD3-209ENST00000519485 DPYDQ12882 1025 aa6.77□□□□□ -1.33
CSMD3-209ENST00000519485 CRTC2Q53ET0 693 aaPredicted RBP6.77□□□□□ -1.33
CSMD3-209ENST00000519485 ANKMY2Q8IV38 441 aa6.77□□□□□ -1.33
CSMD3-209ENST00000519485 GLMNQ92990 594 aa6.77□□□□□ -1.33
CSMD3-209ENST00000519485 LOC102724428A0A0B4J2F2 783 aa6.76□□□□□ -1.33
CSMD3-209ENST00000519485 KIAA1324LA8MWY0 1029 aaPredicted RBP6.76□□□□□ -1.33
CSMD3-209ENST00000519485 OPLAHO14841 1288 aa6.76□□□□□ -1.33
CSMD3-209ENST00000519485 EIF2AK2P19525 551 aaKnown RBP6.76□□□□□ -1.33
CSMD3-209ENST00000519485 SIK1P57059 783 aa6.76□□□□□ -1.33
CSMD3-209ENST00000519485 FNBP4Q8N3X1 1017 aaPredicted RBP6.76□□□□□ -1.33
CSMD3-209ENST00000519485 PLD4Q96BZ4 506 aa6.76□□□□□ -1.33
CSMD3-209ENST00000519485 RTCBQ9Y3I0 505 aaKnown RBP6.76□□□□□ -1.33
CSMD3-209ENST00000519485 KRTAP4-8A0A0G2JLE6 195 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L15C9J2P7 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L10C9JJH3 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L13C9JLJ4 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L12C9JPN9 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L11C9JVI0 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L21D6R901 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L18D6R9N7 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L22D6RA61 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L17D6RBQ6 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L19D6RCP7 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L20D6RJB6 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 USP17L24Q0WX57 530 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 ARXQ96QS3 562 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 MUC3BQ9H195 1237 aa6.75□□□□□ -1.33
CSMD3-209ENST00000519485 PSAPP07602 524 aa6.74□□□□□ -1.33
CSMD3-209ENST00000519485 SETDB1Q15047 1291 aa6.74□□□□□ -1.33
CSMD3-209ENST00000519485 HFE2Q6ZVN8 426 aa6.74□□□□□ -1.33
CSMD3-209ENST00000519485 PPP1R12CQ9BZL4 782 aa6.74□□□□□ -1.33
CSMD3-209ENST00000519485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.74□□□□□ -1.33
CSMD3-209ENST00000519485 XYLBO75191 536 aa6.73□□□□□ -1.33
CSMD3-209ENST00000519485 ALX3O95076 343 aa6.73□□□□□ -1.33
CSMD3-209ENST00000519485 TXKP42681 527 aa6.73□□□□□ -1.33
CSMD3-209ENST00000519485 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.73□□□□□ -1.33
CSMD3-209ENST00000519485 IL22RA1Q8N6P7 574 aa6.73□□□□□ -1.33
CSMD3-209ENST00000519485 RBSNQ9H1K0 784 aa6.73□□□□□ -1.33
CSMD3-209ENST00000519485 RAXQ9Y2V3 346 aa6.73□□□□□ -1.33
CSMD3-209ENST00000519485 KCNMB2Q9Y691 235 aa6.73□□□□□ -1.33
CSMD3-209ENST00000519485 PTCD1O75127 700 aaKnown RBP6.72□□□□□ -1.33
CSMD3-209ENST00000519485 GHRHP01286 108 aa6.72□□□□□ -1.33
CSMD3-209ENST00000519485 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
CSMD3-209ENST00000519485 SSTR4P31391 388 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms