RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 SRGNP10124 158 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 ALDH1B1P30837 517 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
CLN8-203ENST00000518780 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 STYK1Q6J9G0 422 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 DDX46Q7L014 1031 aaKnown RBP11.82□□□□□ -0.52
CLN8-203ENST00000518780 TMC4Q7Z404 712 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 RPGRQ92834 1020 aaKnown RBP11.82□□□□□ -0.52
CLN8-203ENST00000518780 MASTLQ96GX5 879 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 RBM17Q96I25 401 aaKnown RBP11.82□□□□□ -0.52
CLN8-203ENST00000518780 CRAMP1Q96RY5 1269 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 CDC5LQ99459 802 aaKnown RBP11.82□□□□□ -0.52
CLN8-203ENST00000518780 FBXO3Q9UK99 471 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 NRXN2Q9P2S2 1712 aa11.82□□□□□ -0.52
CLN8-203ENST00000518780 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
CLN8-203ENST00000518780 ANKRD18BA2A2Z9 1011 aa11.81□□□□□ -0.52
CLN8-203ENST00000518780 BBOX1O75936 387 aa11.81□□□□□ -0.52
CLN8-203ENST00000518780 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
CLN8-203ENST00000518780 CEP85Q6P2H3 762 aa11.81□□□□□ -0.52
CLN8-203ENST00000518780 SSH3Q8TE77 659 aa11.81□□□□□ -0.52
CLN8-203ENST00000518780 CNKSR1Q969H4 720 aa11.81□□□□□ -0.52
CLN8-203ENST00000518780 SRGAP3O43295 1099 aa11.8□□□□□ -0.52
CLN8-203ENST00000518780 POLA2Q14181 598 aa11.8□□□□□ -0.52
CLN8-203ENST00000518780 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
CLN8-203ENST00000518780 PPP1R1BQ9UD71 204 aaPredicted RBP11.8□□□□□ -0.52
CLN8-203ENST00000518780 ITGA6P23229 1130 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 IGHMBP2P38935 993 aaKnown RBP11.79□□□□□ -0.52
CLN8-203ENST00000518780 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
CLN8-203ENST00000518780 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
CLN8-203ENST00000518780 HDAC1Q13547 482 aaPredicted RBP11.79□□□□□ -0.52
CLN8-203ENST00000518780 GRAPQ13588 217 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 CCDC24Q8N4L8 307 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
CLN8-203ENST00000518780 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
CLN8-203ENST00000518780 GREM2Q9H772 168 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 COPRSQ9NQ92 184 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 CHMP3Q9Y3E7 222 aa11.79□□□□□ -0.52
CLN8-203ENST00000518780 CIAO1O76071 339 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 CC2D2BQ6DHV5 1058 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 TMX4Q9H1E5 349 aaPredicted RBP11.78□□□□□ -0.52
CLN8-203ENST00000518780 C1orf115Q9H7X2 142 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 BSDC1Q9NW68 430 aaPredicted RBP11.78□□□□□ -0.52
CLN8-203ENST00000518780 PIM2Q9P1W9 311 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
CLN8-203ENST00000518780 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
CLN8-203ENST00000518780 RFX5P48382 616 aaPredicted RBP11.77□□□□□ -0.53
CLN8-203ENST00000518780 PTPN12Q05209 780 aaKnown RBP11.77□□□□□ -0.53
CLN8-203ENST00000518780 SIRT2Q8IXJ6 389 aa11.77□□□□□ -0.53
CLN8-203ENST00000518780 TTLL6Q8N841 843 aa11.77□□□□□ -0.53
CLN8-203ENST00000518780 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
CLN8-203ENST00000518780 AFDNP55196 1824 aaKnown RBP11.76□□□□□ -0.53
CLN8-203ENST00000518780 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 RAB11FIP3O75154 756 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 DPEP1P16444 411 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 KCNA3P22001 575 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 ERC1Q8IUD2 1116 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 ZNF622Q969S3 477 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLN8-203ENST00000518780 GCC1Q96CN9 775 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
CLN8-203ENST00000518780 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
CLN8-203ENST00000518780 A0A0G2JLW4 131 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 EYA2O00167 538 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 KCNA4P22459 653 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 CHRNA5P30532 468 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 IL15P40933 162 aaPredicted RBP11.75□□□□□ -0.53
CLN8-203ENST00000518780 G3BP1Q13283 466 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLN8-203ENST00000518780 SP8Q8IXZ3 490 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 CCDC85AQ96PX6 553 aaPredicted RBP11.75□□□□□ -0.53
CLN8-203ENST00000518780 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 FHDC1Q9C0D6 1143 aaPredicted RBP11.75□□□□□ -0.53
CLN8-203ENST00000518780 ANKRD2Q9GZV1 360 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 DCTPP1Q9H773 170 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 MROH5Q6ZUA9 1318 aa11.75□□□□□ -0.53
CLN8-203ENST00000518780 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
CLN8-203ENST00000518780 DALRD3Q5D0E6 543 aaKnown RBP11.74□□□□□ -0.53
CLN8-203ENST00000518780 KLHL34Q8N239 644 aa11.74□□□□□ -0.53
CLN8-203ENST00000518780 CELF1Q92879 486 aaKnown RBP11.74□□□□□ -0.53
CLN8-203ENST00000518780 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
CLN8-203ENST00000518780 ATP6V0A2Q9Y487 856 aa11.74□□□□□ -0.53
CLN8-203ENST00000518780 RIPOR2Q9Y4F9 1068 aa11.74□□□□□ -0.53
CLN8-203ENST00000518780 PPEF1O14829 653 aaPredicted RBP11.73□□□□□ -0.53
CLN8-203ENST00000518780 LAMB2P55268 1798 aa11.73□□□□□ -0.53
CLN8-203ENST00000518780 PRPF40BQ6NWY9 871 aaKnown RBP11.73□□□□□ -0.53
CLN8-203ENST00000518780 C7orf43Q8WVR3 580 aa11.73□□□□□ -0.53
CLN8-203ENST00000518780 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
CLN8-203ENST00000518780 DDX60Q8IY21 1712 aaKnown RBP11.72□□□□□ -0.53
CLN8-203ENST00000518780 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
CLN8-203ENST00000518780 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms