RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
PABPC1-207ENST00000518716 TOM1L2Q6ZVM7 507 aa8.79□□□□□ -1
PABPC1-207ENST00000518716 ARXQ96QS3 562 aa8.79□□□□□ -1
PABPC1-207ENST00000518716 CARD10Q9BWT7 1032 aa8.79□□□□□ -1
PABPC1-207ENST00000518716 USP6P35125 1406 aa8.79□□□□□ -1
PABPC1-207ENST00000518716 ADAM23O75077 832 aa8.78□□□□□ -1
PABPC1-207ENST00000518716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.78□□□□□ -14e-11■□□□□ 9.3
PABPC1-207ENST00000518716 PAPPAQ13219 1627 aa8.78□□□□□ -1
PABPC1-207ENST00000518716 PPIP5K1Q6PFW1 1433 aa8.78□□□□□ -1
PABPC1-207ENST00000518716 WNK3Q9BYP7 1800 aa8.77□□□□□ -1
PABPC1-207ENST00000518716 NDUFV2P19404 249 aa8.77□□□□□ -1.01
PABPC1-207ENST00000518716 NBPF1Q3BBV0 1214 aa8.77□□□□□ -1.01
PABPC1-207ENST00000518716 DESI1Q6ICB0 168 aa8.77□□□□□ -1.01
PABPC1-207ENST00000518716 COL24A1Q17RW2 1714 aa8.77□□□□□ -1.01
PABPC1-207ENST00000518716 RAB3GAP2Q9H2M9 1393 aa8.76□□□□□ -1.01
PABPC1-207ENST00000518716 EXOC5O00471 708 aa8.76□□□□□ -1.01
PABPC1-207ENST00000518716 SPTLC1O15269 473 aa8.76□□□□□ -1.01
PABPC1-207ENST00000518716 CLCN1P35523 988 aa8.76□□□□□ -1.01
PABPC1-207ENST00000518716 MARSP56192 900 aaKnown RBP8.76□□□□□ -1.01
PABPC1-207ENST00000518716 CCDC155Q8N6L0 562 aa8.76□□□□□ -1.01
PABPC1-207ENST00000518716 LRRC4BQ9NT99 713 aa8.76□□□□□ -1.01
PABPC1-207ENST00000518716 CABP1Q9NZU7 370 aa8.76□□□□□ -1.01
PABPC1-207ENST00000518716 CPSF1Q10570 1443 aaKnown RBP8.76□□□□□ -1.01
PABPC1-207ENST00000518716 PIK3C2AO00443 1686 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 KIAA1210Q9ULL0 1709 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 TTLL8A6PVC2 850 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 CTHP32929 405 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 ZNF827Q17R98 1081 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 SPIRE2Q8WWL2 714 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 CCDC102AQ96A19 550 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 AKAP12Q02952 1782 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 TRPM1Q7Z4N2 1603 aa8.75□□□□□ -1.01
PABPC1-207ENST00000518716 TNS2Q63HR2 1409 aa8.74□□□□□ -1.01
PABPC1-207ENST00000518716 MOXD2PA6NHM9 499 aa8.74□□□□□ -1.01
PABPC1-207ENST00000518716 SRPK2P78362 688 aaKnown RBP8.74□□□□□ -1.01
PABPC1-207ENST00000518716 SCARF2Q96GP6 870 aaPredicted RBP8.74□□□□□ -1.01
PABPC1-207ENST00000518716 TSEN34Q9BSV6 310 aaKnown RBP8.74□□□□□ -1.01
PABPC1-207ENST00000518716 NHSQ6T4R5 1651 aa8.74□□□□□ -1.01
PABPC1-207ENST00000518716 NFAT5O94916 1531 aa8.74□□□□□ -1.01
PABPC1-207ENST00000518716 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
PABPC1-207ENST00000518716 CCDC7Q96M83 1385 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 RGPD5Q99666 1765 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 FIGNL2A6NMB9 653 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 GIGYF1O75420 1035 aaPredicted RBP8.73□□□□□ -1.01
PABPC1-207ENST00000518716 ITGB2P05107 769 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 MTMR2Q13614 643 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 KCNH5Q8NCM2 988 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 ABCC6O95255 1503 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 TTC21BQ7Z4L5 1316 aa8.73□□□□□ -1.01
PABPC1-207ENST00000518716 CENPJQ9HC77 1338 aaPredicted RBP8.73□□□□□ -1.01
PABPC1-207ENST00000518716 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
PABPC1-207ENST00000518716 GPR162Q16538 588 aa8.72□□□□□ -1.01
PABPC1-207ENST00000518716 PLA2G4EQ3MJ16 856 aa8.72□□□□□ -1.01
PABPC1-207ENST00000518716 LYPD8Q6UX82 237 aa8.72□□□□□ -1.01
PABPC1-207ENST00000518716 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
PABPC1-207ENST00000518716 PNPLA7Q6ZV29 1317 aa8.72□□□□□ -1.01
PABPC1-207ENST00000518716 SLC35F4A4IF30 521 aa8.71□□□□□ -1.02
PABPC1-207ENST00000518716 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-207ENST00000518716 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-207ENST00000518716 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
PABPC1-207ENST00000518716 LYPD4Q6UWN0 246 aa8.71□□□□□ -1.02
PABPC1-207ENST00000518716 NLGN2Q8NFZ4 835 aa8.71□□□□□ -1.02
PABPC1-207ENST00000518716 ACSBG1Q96GR2 724 aa8.71□□□□□ -1.02
PABPC1-207ENST00000518716 SPOCK3Q9BQ16 436 aa8.71□□□□□ -1.02
PABPC1-207ENST00000518716 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.02
PABPC1-207ENST00000518716 BTAF1O14981 1849 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 MSTNO14793 375 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 ITGA6P23229 1130 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 FSHRP23945 695 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 AGERQ15109 404 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 SLC27A3Q5K4L6 730 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 TTC21AQ8NDW8 1320 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 USP31Q70CQ4 1352 aa8.7□□□□□ -1.02
PABPC1-207ENST00000518716 KAT6BQ8WYB5 2073 aa8.69□□□□□ -1.02
PABPC1-207ENST00000518716 CSB-PGBD3P0DP91 1061 aa8.69□□□□□ -1.02
PABPC1-207ENST00000518716 KRTAP9-2Q9BYQ4 174 aa8.69□□□□□ -1.02
PABPC1-207ENST00000518716 QRICH2Q9H0J4 1663 aa8.69□□□□□ -1.02
PABPC1-207ENST00000518716 CDC14CA4D256 554 aa8.68□□□□□ -1.02
PABPC1-207ENST00000518716 CFAP99D6REC4 459 aa8.68□□□□□ -1.02
PABPC1-207ENST00000518716 GRIN3BO60391 1043 aa8.68□□□□□ -1.02
PABPC1-207ENST00000518716 IL2RBP14784 551 aa8.68□□□□□ -1.02
PABPC1-207ENST00000518716 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
PABPC1-207ENST00000518716 C1QTNF2Q9BXJ5 285 aa8.68□□□□□ -1.02
PABPC1-207ENST00000518716 ADCY9O60503 1353 aa8.68□□□□□ -1.02
PABPC1-207ENST00000518716 NSD2O96028 1365 aa8.67□□□□□ -1.02
PABPC1-207ENST00000518716 PROCP04070 461 aa8.67□□□□□ -1.02
PABPC1-207ENST00000518716 POLD1P28340 1107 aa8.67□□□□□ -1.02
PABPC1-207ENST00000518716 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
PABPC1-207ENST00000518716 EVC2Q86UK5 1308 aa8.67□□□□□ -1.02
PABPC1-207ENST00000518716 DCAF5Q96JK2 942 aa8.67□□□□□ -1.02
PABPC1-207ENST00000518716 TUBGCP6Q96RT7 1819 aa8.66□□□□□ -1.02
PABPC1-207ENST00000518716 USP54Q70EL1 1684 aa8.66□□□□□ -1.02
PABPC1-207ENST00000518716 ATP10DQ9P241 1426 aa8.66□□□□□ -1.02
PABPC1-207ENST00000518716 SPINT1O43278 529 aa8.66□□□□□ -1.02
PABPC1-207ENST00000518716 HSPA6P17066 643 aa8.66□□□□□ -1.02
PABPC1-207ENST00000518716 NLRP2Q9NX02 1062 aa8.66□□□□□ -1.02
PABPC1-207ENST00000518716 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
PABPC1-207ENST00000518716 SBNO2Q9Y2G9 1366 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms