RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 COL5A3P25940 1745 aaPredicted RBP22.08■■□□□ 1.13
SDC2-202ENST00000518385 CCDC191Q8NCU4 936 aa22.08■■□□□ 1.12
SDC2-202ENST00000518385 COPRSQ9NQ92 184 aa22.08■■□□□ 1.12
SDC2-202ENST00000518385 MYH14Q7Z406 1995 aaKnown RBP22.07■■□□□ 1.12
SDC2-202ENST00000518385 H7C1W4 665 aa22.07■■□□□ 1.12
SDC2-202ENST00000518385 GLRX3O76003 335 aaKnown RBP22.07■■□□□ 1.12
SDC2-202ENST00000518385 TRIM37O94972 964 aa22.07■■□□□ 1.12
SDC2-202ENST00000518385 RC3H1Q5TC82 1133 aaKnown RBP22.07■■□□□ 1.12
SDC2-202ENST00000518385 PDLIM2Q96JY6 352 aa22.07■■□□□ 1.12
SDC2-202ENST00000518385 CWC25Q9NXE8 425 aaPredicted RBP22.07■■□□□ 1.12
SDC2-202ENST00000518385 CCNL1Q9UK58 526 aaPredicted RBP22.07■■□□□ 1.12
SDC2-202ENST00000518385 LY75O60449 1722 aa22.07■■□□□ 1.12
SDC2-202ENST00000518385 CNTNAP4Q9C0A0 1308 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 A0A087WZG4 1122 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 ERVV-1B6SEH8 477 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 ATP5J2-PTCD1G3V325 749 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 KCNQ4P56696 695 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 TCIRG1Q13488 830 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 CSPP1Q1MSJ5 1256 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 LMBRD1Q9NUN5 540 aa22.06■■□□□ 1.12
SDC2-202ENST00000518385 TRIM6-TRIM34B2RNG4 842 aa22.05■■□□□ 1.12
SDC2-202ENST00000518385 ZNF500O60304 480 aaPredicted RBP22.05■■□□□ 1.12
SDC2-202ENST00000518385 CASP7P55210 303 aa22.05■■□□□ 1.12
SDC2-202ENST00000518385 TRIM28Q13263 835 aaKnown RBP22.05■■□□□ 1.12
SDC2-202ENST00000518385 GIGYF2Q6Y7W6 1299 aaKnown RBP22.05■■□□□ 1.12
SDC2-202ENST00000518385 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
SDC2-202ENST00000518385 NUTM1Q86Y26 1132 aa22.05■■□□□ 1.12
SDC2-202ENST00000518385 PI4K2BQ8TCG2 481 aa22.05■■□□□ 1.12
SDC2-202ENST00000518385 IL17RAQ96F46 866 aa22.05■■□□□ 1.12
SDC2-202ENST00000518385 CHMLP26374 656 aa22.04■■□□□ 1.12
SDC2-202ENST00000518385 ISCA1Q9BUE6 129 aa22.04■■□□□ 1.12
SDC2-202ENST00000518385 PDCL3Q9H2J4 239 aa22.04■■□□□ 1.12
SDC2-202ENST00000518385 IFIT2P09913 472 aaKnown RBP22.04■■□□□ 1.12
SDC2-202ENST00000518385 ANAPC15P60006 121 aa22.04■■□□□ 1.12
SDC2-202ENST00000518385 CNTROBQ8N137 903 aa22.04■■□□□ 1.12
SDC2-202ENST00000518385 ESYT1Q9BSJ8 1104 aa22.04■■□□□ 1.12
SDC2-202ENST00000518385 ECHDC1Q9NTX5 307 aa22.04■■□□□ 1.12
SDC2-202ENST00000518385 ZSCAN23Q3MJ62 389 aa22.03■■□□□ 1.12
SDC2-202ENST00000518385 UBE3BQ7Z3V4 1068 aa22.03■■□□□ 1.12
SDC2-202ENST00000518385 RILPL2Q969X0 211 aa22.03■■□□□ 1.12
SDC2-202ENST00000518385 NOL7Q9UMY1 257 aaKnown RBP22.03■■□□□ 1.12
SDC2-202ENST00000518385 TBC1D2BQ9UPU7 963 aa22.03■■□□□ 1.12
SDC2-202ENST00000518385 MCCP23508 829 aa22.02■■□□□ 1.12
SDC2-202ENST00000518385 HLFQ16534 295 aa22.02■■□□□ 1.12
SDC2-202ENST00000518385 HSP90AB3PQ58FF7 597 aa22.02■■□□□ 1.12
SDC2-202ENST00000518385 MTERF4Q7Z6M4 381 aaKnown RBP22.02■■□□□ 1.12
SDC2-202ENST00000518385 PA2G4Q9UQ80 394 aaKnown RBP22.02■■□□□ 1.12
SDC2-202ENST00000518385 MCTP1Q6DN14 999 aa22.01■■□□□ 1.11
SDC2-202ENST00000518385 INTS4Q96HW7 963 aaKnown RBP22.01■■□□□ 1.11
SDC2-202ENST00000518385 RPS6KA4O75676 772 aa22■■□□□ 1.11
SDC2-202ENST00000518385 SASH1O94885 1247 aa22■■□□□ 1.11
SDC2-202ENST00000518385 RFX5P48382 616 aaPredicted RBP22■■□□□ 1.11
SDC2-202ENST00000518385 EPHA10Q5JZY3 1008 aa22■■□□□ 1.11
SDC2-202ENST00000518385 SLC27A3Q5K4L6 730 aa22■■□□□ 1.11
SDC2-202ENST00000518385 TSHZ3Q63HK5 1081 aa22■■□□□ 1.11
SDC2-202ENST00000518385 SYAP1Q96A49 352 aaPredicted RBP22■■□□□ 1.11
SDC2-202ENST00000518385 TAF1LQ8IZX4 1826 aa21.99■■□□□ 1.11
SDC2-202ENST00000518385 LRSAM1Q6UWE0 723 aa21.99■■□□□ 1.11
SDC2-202ENST00000518385 LRRC4BQ9NT99 713 aa21.99■■□□□ 1.11
SDC2-202ENST00000518385 CAMTA2O94983 1202 aa21.98■■□□□ 1.11
SDC2-202ENST00000518385 AACSQ86V21 672 aa21.98■■□□□ 1.11
SDC2-202ENST00000518385 CCDC39Q9UFE4 941 aa21.98■■□□□ 1.11
SDC2-202ENST00000518385 AK9Q5TCS8 1911 aa21.98■■□□□ 1.11
SDC2-202ENST00000518385 NUP98P52948 1817 aa21.97■■□□□ 1.11
SDC2-202ENST00000518385 PLSCR1O15162 318 aa21.97■■□□□ 1.11
SDC2-202ENST00000518385 PHF14O94880 888 aa21.97■■□□□ 1.11
SDC2-202ENST00000518385 FOXO4P98177 505 aa21.97■■□□□ 1.11
SDC2-202ENST00000518385 PTPN12Q05209 780 aaKnown RBP21.97■■□□□ 1.11
SDC2-202ENST00000518385 CAVIN1Q6NZI2 390 aaKnown RBP21.96■■□□□ 1.11
SDC2-202ENST00000518385 KIAA1211Q6ZU35 1233 aa21.96■■□□□ 1.11
SDC2-202ENST00000518385 ZNF34Q8IZ26 560 aa21.96■■□□□ 1.11
SDC2-202ENST00000518385 JARID2Q92833 1246 aaPredicted RBP21.96■■□□□ 1.11
SDC2-202ENST00000518385 FOXD4L1Q9NU39 408 aa21.96■■□□□ 1.11
SDC2-202ENST00000518385 HIP1O00291 1037 aa21.95■■□□□ 1.11
SDC2-202ENST00000518385 RGL2O15211 777 aa21.95■■□□□ 1.11
SDC2-202ENST00000518385 HMGB2P26583 209 aaKnown RBP21.95■■□□□ 1.11
SDC2-202ENST00000518385 CUL4AQ13619 759 aa21.95■■□□□ 1.11
SDC2-202ENST00000518385 NLRP10Q86W26 655 aa21.95■■□□□ 1.11
SDC2-202ENST00000518385 RUFY2Q8WXA3 655 aa21.95■■□□□ 1.11
SDC2-202ENST00000518385 EVI5LQ96CN4 794 aa21.95■■□□□ 1.11
SDC2-202ENST00000518385 LMBR1LQ6UX01 489 aa21.95■■□□□ 1.1
SDC2-202ENST00000518385 EAF2Q96CJ1 260 aaPredicted RBP21.95■■□□□ 1.1
SDC2-202ENST00000518385 FBXO3Q9UK99 471 aa21.95■■□□□ 1.1
SDC2-202ENST00000518385 RTCBQ9Y3I0 505 aaKnown RBP21.95■■□□□ 1.1
SDC2-202ENST00000518385 GNPATO15228 680 aa21.94■■□□□ 1.1
SDC2-202ENST00000518385 APBA3O96018 575 aa21.94■■□□□ 1.1
SDC2-202ENST00000518385 PCCAP05165 728 aaPredicted RBP21.94■■□□□ 1.1
SDC2-202ENST00000518385 CLEC4GQ6UXB4 293 aa21.94■■□□□ 1.1
SDC2-202ENST00000518385 PROM2Q8N271 834 aa21.94■■□□□ 1.1
SDC2-202ENST00000518385 PLA2G12BQ9BX93 195 aa21.94■■□□□ 1.1
SDC2-202ENST00000518385 GPR108Q9NPR9 543 aa21.94■■□□□ 1.1
SDC2-202ENST00000518385 C4BP0C0L5 1744 aa21.94■■□□□ 1.1
SDC2-202ENST00000518385 ANKRD36CQ5JPF3 1778 aa21.93■■□□□ 1.1
SDC2-202ENST00000518385 GPTP24298 496 aa21.93■■□□□ 1.1
SDC2-202ENST00000518385 TXNRD1Q16881 649 aa21.93■■□□□ 1.1
SDC2-202ENST00000518385 ZBTB38Q8NAP3 1195 aaPredicted RBP21.93■■□□□ 1.1
SDC2-202ENST00000518385 ZKSCAN5Q9Y2L8 839 aa21.93■■□□□ 1.1
SDC2-202ENST00000518385 TICAM2Q86XR7 235 aa21.92■■□□□ 1.1
SDC2-202ENST00000518385 FAM184AQ8NB25 1140 aa21.92■■□□□ 1.1
SDC2-202ENST00000518385 SIL1Q9H173 461 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms