RNA–Protein interactions for RNA: ENST00000516942.1

RNU6-143P-201, Transcript of RNA, U6 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU6-143P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-143P-201ENST00000516942 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 ZNF438Q7Z4V0 828 aa5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 C1orf127Q8N9H9 656 aa5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 GPAMQ9HCL2 828 aa5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 NEUROD4Q9HD90 331 aa5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 BRD7Q9NPI1 651 aa5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 STRN4Q9NRL3 753 aa5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 KCNH4Q9UQ05 1017 aa5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.02□□□□□ -1.61
RNU6-143P-201ENST00000516942 BNIP3LO60238 219 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 PSMD2Q13200 908 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 KIAA0319Q5VV43 1072 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 FIGNL1Q6PIW4 674 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 PI16Q6UXB8 463 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 TRIM22Q8IYM9 498 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 GLIS3Q8NEA6 775 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 EPS8L3Q8TE67 593 aaKnown RBP5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 PMEPA1Q969W9 287 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 GMCL1Q96IK5 515 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 EFCC1Q9HA90 598 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 ABI2Q9NYB9 513 aaPredicted RBP5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 ZFATQ9P243 1243 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 SALL4Q9UJQ4 1053 aa5.01□□□□□ -1.61
RNU6-143P-201ENST00000516942 SOBPA7XYQ1 873 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 LCE2BO14633 110 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 EREGO14944 169 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 ATXN7O15265 892 aaPredicted RBP5□□□□□ -1.61
RNU6-143P-201ENST00000516942 KIF4AO95239 1232 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 MAP3K6O95382 1288 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 MAPTP10636 758 aaKnown RBP5□□□□□ -1.61
RNU6-143P-201ENST00000516942 IRS1P35568 1242 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 PTPN12Q05209 780 aaKnown RBP5□□□□□ -1.61
RNU6-143P-201ENST00000516942 GRIN2CQ14957 1233 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 EFHC2Q5JST6 749 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 FAM182BQ5T319 152 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 PEAR1Q5VY43 1037 aaPredicted RBP5□□□□□ -1.61
RNU6-143P-201ENST00000516942 OR13H1Q8NG92 308 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 ANKRD24Q8TF21 1146 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 TRIM47Q96LD4 638 aa5□□□□□ -1.61
RNU6-143P-201ENST00000516942 GAS2L1Q99501 681 aaPredicted RBP5□□□□□ -1.61
RNU6-143P-201ENST00000516942 MAN1A2O60476 641 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 MMP20O60882 483 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 PHACTR2O75167 634 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 SASH3O75995 380 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 CYP2E1P05181 493 aaPredicted RBP4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 TARSP26639 723 aaKnown RBP4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 ITGAEP38570 1179 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 CCINQ13939 588 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 PGBD3Q8N328 593 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 CCDC155Q8N6L0 562 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 TMEM87AQ8NBN3 555 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 TTC16Q8NEE8 873 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 CRELD1Q96HD1 420 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 SRCIN1Q9C0H9 1055 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 C12orf49Q9H741 205 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 SPG7Q9UQ90 795 aa4.99□□□□□ -1.61
RNU6-143P-201ENST00000516942 H7C1W4 665 aa4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 SOX18P35713 384 aa4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 ST13P50502 369 aaKnown RBP4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 KIFC2Q96AC6 838 aa4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 ZNF837Q96EG3 531 aaPredicted RBP4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 BCL11AQ9H165 835 aa4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 NUCKS1Q9H1E3 243 aaKnown RBP4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 SENP2Q9HC62 589 aa4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 TLR7Q9NYK1 1049 aaKnown RBP4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 GJA3Q9Y6H8 435 aa4.98□□□□□ -1.61
RNU6-143P-201ENST00000516942 A0A1W2PP55 124 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 NFKBIEO00221 500 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 POLR3DP05423 398 aaPredicted RBP4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 ITGA6P23229 1130 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 EIF4BP23588 611 aaKnown RBP4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 ZC3H6P61129 1189 aaKnown RBP4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 MAP3K10Q02779 954 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 GRM2Q14416 872 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 C9orf131Q5VYM1 1079 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 PRPF40BQ6NWY9 871 aaKnown RBP4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 NT5DC4Q86YG4 428 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 CEP120Q8N960 986 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 C3orf58Q8NDZ4 430 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 NANOS1Q8WY41 292 aaKnown RBP4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 RNF34Q969K3 372 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 SLC30A3Q99726 388 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 BCO2Q9BYV7 579 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 SUV39H2Q9H5I1 410 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 SRA1Q9HD15 236 aaKnown RBP4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 MRS2Q9HD23 443 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 NPHS2Q9NP85 383 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 MARK1Q9P0L2 795 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 FAM8A1Q9UBU6 413 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 VTI1BQ9UEU0 232 aa4.97□□□□□ -1.61
RNU6-143P-201ENST00000516942 LOC105371045A0A1W2PR82 267 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 CES1P23141 567 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 SPEM2Q0P670 501 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 COL13A1Q5TAT6 717 aaPredicted RBP4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 NXPE4Q6UWF7 544 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 SLC43A3Q8NBI5 491 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 CNTNAP3BQ96NU0 1288 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 TCF12Q99081 682 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 MDFIQ99750 246 aa4.96□□□□□ -1.62
RNU6-143P-201ENST00000516942 CNTNAP3Q9BZ76 1288 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms