RNA–Protein interactions for RNA: ENST00000516622.1

RNU6-1247P-201, Transcript of RNA, U6 small nuclear 1247, pseudogene, humanhuman

BASIC

Gene RNU6-1247P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1247P-201ENST00000516622 PRICKLE3O43900 615 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 LYPD3O95274 346 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 TOP3BO95985 862 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PRNPP04156 253 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 KIR3DL1P43629 444 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 KIR3DL2P43630 455 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 XGP55808 180 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 JAG1P78504 1218 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 EGR4Q05215 589 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 CKAP4Q07065 602 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MAPK8IP2Q13387 824 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ADGRE1Q14246 886 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PDCD2Q16342 344 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MYLK3Q32MK0 819 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 NPNTQ6UXI9 565 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 Q75L30 129 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 C1QL2Q7Z5L3 287 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PABPN1Q86U42 306 aaKnown RBP eCLIP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SCUBE3Q8IX30 993 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 AENQ8WTP8 325 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 CDCA7Q9BWT1 371 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 RNF39Q9H2S5 420 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ANTXR1Q9H6X2 564 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 METTL14Q9HCE5 456 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ANO8Q9HCE9 1232 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SLC2A4RGQ9NR83 387 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PLAC8Q9NZF1 115 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 KLF2Q9Y5W3 355 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ITGB4P16144 1822 aa-0.94□□□□□ -2.56
RNU6-1247P-201ENST00000516622 AKAP9Q99996 3911 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 RTTNQ86VV8 2226 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ROS1P08922 2347 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MED13Q9UHV7 2174 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 WTIPA6NIX2 430 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 C17orf51A8MQB3 221 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ZBTB22O15209 634 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 NOBOXO60393 691 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 NTRK1P04629 796 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 APLNRP35414 380 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 TRA2BP62995 288 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 TAP1Q03518 808 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PDLIM3Q53GG5 364 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 CRTC1Q6UUV9 634 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PDZRN4Q6ZMN7 1036 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MMP21Q8N119 569 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SLC25A41Q8N5S1 370 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 CD177Q8N6Q3 437 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 USHBP1Q8N6Y0 703 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SPATA3Q8NHX4 192 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ZDHHC16Q969W1 377 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ZNF775Q96BV0 537 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 GCC1Q96CN9 775 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 RADILQ96JH8 1075 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 LMLNQ96KR4 655 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 LSM14BQ9BX40 385 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 INO80BQ9C086 356 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MSL2Q9HCI7 577 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SMPD3Q9NY59 655 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ZNF777Q9ULD5 760 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MYRFQ9Y2G1 1151 aa-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ZNF646O15015 1829 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1247P-201ENST00000516622 CFAP99D6REC4 459 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 DVL1O14640 695 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PER1O15534 1290 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 BRINP1O60477 761 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 COBLO75128 1261 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 COL6A2P12110 1019 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 DVL1P1P54792 670 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 HAND2P61296 217 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 TMEM62Q0P6H9 643 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SHHQ15465 462 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 NHSL2Q5HYW2 709 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SOGA3Q5TF21 947 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ASPHD1Q5U4P2 390 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 FOXB2Q5VYV0 432 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MTHFD1LQ6UB35 978 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 LYPD4Q6UWN0 246 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 C6orf15Q6UXA7 325 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ADAMTS18Q8TE60 1221 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 FBXL18Q96ME1 805 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 FAM161BQ96MY7 647 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SH2D3AQ9BRG2 576 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 TRAF4Q9BUZ4 470 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ADAM33Q9BZ11 813 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 FN3KRPQ9HA64 309 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 GPAMQ9HCL2 828 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 NKX1-2Q9UD57 310 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 CHIC2Q9UKJ5 165 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 MRPS18BQ9Y676 258 aaKnown RBP-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 EMILIN1Q9Y6C2 1016 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 WNT6Q9Y6F9 365 aa-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 COL5A3P25940 1745 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1247P-201ENST00000516622 HECW1Q76N89 1606 aa-0.97□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PTCH1Q13635 1447 aa-0.97□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SEC16AO15027 2179 aa-0.97□□□□□ -2.56
RNU6-1247P-201ENST00000516622 CLDN9O95484 217 aa-0.97□□□□□ -2.56
RNU6-1247P-201ENST00000516622 HRGP04196 525 aa-0.97□□□□□ -2.56
RNU6-1247P-201ENST00000516622 ITGB5P18084 799 aa-0.97□□□□□ -2.56
RNU6-1247P-201ENST00000516622 PTPN5P54829 565 aa-0.97□□□□□ -2.56
RNU6-1247P-201ENST00000516622 SRSF1Q07955 248 aaKnown RBP eCLIP-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms