RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 HHIPL2Q6UWX4 724 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 WFDC8Q8IUA0 241 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 ZFPM1Q8IX07 1006 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 CABLES1Q8TDN4 633 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 TSC1Q92574 1164 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 GPR20Q99678 358 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 UBE2OQ9C0C9 1292 aaKnown RBP1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 KCNF1Q9H3M0 494 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 IGFLR1Q9H665 355 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 WDR70Q9NW82 654 aa1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 ZC3H7BQ9UGR2 993 aaKnown RBP1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 SMG5Q9UPR3 1016 aaKnown RBP1.38□□□□□ -2.19
RNU6-542P-201ENST00000516405 OTOL1A6NHN0 477 aaPredicted RBP1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 ZBTB42B2RXF5 422 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 LILRB3O75022 631 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 GIGYF1O75420 1035 aaPredicted RBP1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 EGFRP00533 1210 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 GNRH1P01148 92 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 MED14OSP0DP75 135 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 FUT4P22083 530 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 GTF2E1P29083 439 aaPredicted RBP1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 KCNMB1Q16558 191 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 CPSF6Q16630 551 aaKnown RBP eCLIP1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 DZIP3Q86Y13 1208 aaKnown RBP1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 LPIN3Q9BQK8 851 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 CEP41Q9BYV8 373 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 FKBPLQ9UIM3 349 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 SLC5A6Q9Y289 635 aa1.37□□□□□ -2.19
RNU6-542P-201ENST00000516405 TMEM253P0C7T8 217 aa1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 PTK2Q05397 1052 aa1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 BNIP3Q12983 259 aa1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 SETDB1Q15047 1291 aa1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 RSBN1LQ6PCB5 846 aaPredicted RBP1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 PPP1R3FQ6ZSY5 799 aaPredicted RBP1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 FOXD4L4Q8WXT5 416 aaPredicted RBP1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 ZBTB3Q9H5J0 574 aa1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 DLL4Q9NR61 685 aa1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 DNAJB12Q9NXW2 375 aaKnown RBP1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 GJA3Q9Y6H8 435 aa1.36□□□□□ -2.19
RNU6-542P-201ENST00000516405 ETV2O00321 342 aaPredicted RBP1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 STAU1O95793 577 aaKnown RBP1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 GJA5P36382 358 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 NEUROD1Q13562 356 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 FYB2Q5VWT5 728 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 ZNF295-AS1Q8N0V1 137 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 Q8N1X5 172 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 FBXO15Q8NCQ5 510 aaPredicted RBP1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 FLAD1Q8NFF5 587 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 GIMAP7Q8NHV1 300 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 ARHGEF1Q92888 912 aaKnown RBP1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 BHMTQ93088 406 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 GPCPD1Q9NPB8 672 aa1.35□□□□□ -2.19
RNU6-542P-201ENST00000516405 TCAF2A6NFQ2 919 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 CD8BP10966 210 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 LMO1P25800 156 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 ADMP35318 185 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 ACVRL1P37023 503 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 CSRP2Q16527 193 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 RTN1Q16799 776 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 PERM1Q5SV97 790 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 GDF6Q6KF10 455 aaPredicted RBP1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 GLCCI1Q86VQ1 547 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 ZNF764Q96H86 408 aaPredicted RBP1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 GPSM3Q9Y4H4 160 aa1.34□□□□□ -2.19
RNU6-542P-201ENST00000516405 TM4SF5O14894 197 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 CPB1P15086 417 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 GLDCP23378 1020 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 CD96P40200 585 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 PREPP48147 710 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 KRTAP10-11P60412 298 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 LRRC69Q6ZNQ3 347 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 KIAA1211Q6ZU35 1233 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 FAM35AQ86V20 835 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 GALNT11Q8NCW6 608 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 PI4K2BQ8TCG2 481 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 DIRC2Q96SL1 478 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 METTL22Q9BUU2 404 aaPredicted RBP1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 KCNK4Q9NYG8 393 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 FRRS1LQ9P0K9 344 aa1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 ATP1B4Q9UN42 357 aaPredicted RBP1.33□□□□□ -2.2
RNU6-542P-201ENST00000516405 FAM170BA6NMN3 283 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 CYR61O00622 381 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 SEMA3EO15041 775 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 AMHP03971 560 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 GDF5P43026 501 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 PLP2Q04941 152 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 SWI5Q1ZZU3 235 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 MPZL3Q6UWV2 235 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 ACAD11Q709F0 780 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 TTC9Q92623 222 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 ZDHHC3Q9NYG2 299 aa1.32□□□□□ -2.2
RNU6-542P-201ENST00000516405 C6P13671 934 aa1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 TATP17735 454 aaPredicted RBP1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 MAP4P27816 1152 aaKnown RBP1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 SSTR3P32745 418 aaPredicted RBP1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 KCNQ4P56696 695 aa1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 TLR1Q15399 786 aa1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 QPCTQ16769 361 aa1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 NBPF1Q3BBV0 1214 aa1.31□□□□□ -2.2
RNU6-542P-201ENST00000516405 SGO2Q562F6 1265 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms