RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 CD97P48960 835 aa3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 GP2P55259 537 aaKnown RBP3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 PERM1Q5SV97 790 aa3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 ILDR2Q71H61 639 aa3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 TSEN2Q8NCE0 465 aaKnown RBP3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 LPIN3Q9BQK8 851 aa3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 C2orf49Q9BVC5 232 aaPredicted RBP3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 CEP41Q9BYV8 373 aa3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 SMG9Q9H0W8 520 aaKnown RBP3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 MKRN1Q9UHC7 482 aaKnown RBP3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 NAGPAQ9UK23 515 aa3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 RAXQ9Y2V3 346 aa3.91□□□□□ -1.78
RNU6-561P-201ENST00000516222 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 USP17L3A6NCW0 530 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 USP17L4A6NCW7 530 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 DLL1O00548 723 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 IGLV1-40P01703 118 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 PSAPP07602 524 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 ARSDP51689 593 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 NRLP54845 237 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 SEC13P55735 322 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 GPLD1P80108 840 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 FZD5Q13467 585 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 USP17L2Q6R6M4 530 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 USP17L1Q7RTZ2 530 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 KRT25Q7Z3Z0 450 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 VTI1AQ96AJ9 217 aa3.9□□□□□ -1.79
RNU6-561P-201ENST00000516222 FAM177BA6PVY3 158 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 F8W735 103 aaPredicted RBP3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 ATP9BO43861 1147 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 SASH3O75995 380 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 WNT11O96014 354 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 RASA1P20936 1047 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 TARSP26639 723 aaKnown RBP3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 IDH3AP50213 366 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 CLDN10P78369 228 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 MLLT1Q03111 559 aaPredicted RBP3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 PLAURQ03405 335 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 LARP1Q6PKG0 1096 aaKnown RBP3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 SIX5Q8N196 739 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 IL22RA1Q8N6P7 574 aa3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 ZNF594Q96JF6 807 aaPredicted RBP3.89□□□□□ -1.79
RNU6-561P-201ENST00000516222 LOC102724428A0A0B4J2F2 783 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 DEAF1O75398 565 aaPredicted RBP3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 ALX3O95076 343 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 INPP5BP32019 993 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 SIK1P57059 783 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 MCM6Q14566 821 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 GRIK5Q16478 980 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 GDF6Q6KF10 455 aaPredicted RBP3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 HFE2Q6ZVN8 426 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 GIMAP7Q8NHV1 300 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 PLD4Q96BZ4 506 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 TLR7Q9NYK1 1049 aaKnown RBP3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 KIAA1024Q9UPX6 916 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 COG6Q9Y2V7 657 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 PPME1Q9Y570 386 aa3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 OAS3Q9Y6K5 1087 aaKnown RBP3.88□□□□□ -1.79
RNU6-561P-201ENST00000516222 KIAA1324LA8MWY0 1029 aaPredicted RBP3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 ZBTB42B2RXF5 422 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 C21orf2O43822 256 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 MICAL2O94851 1124 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 UVSSAQ2YD98 709 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 HDGFL1Q5TGJ6 251 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 FAM117BQ6P1L5 589 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 IFT43Q96FT9 208 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 SPACA7Q96KW9 195 aa3.87□□□□□ -1.79
RNU6-561P-201ENST00000516222 SART1O43290 800 aaKnown RBP3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 TGFB1P01137 390 aa3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 IGFBP4P22692 258 aa3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 NFIAQ12857 509 aa3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 C11orf91Q3C1V1 193 aa3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 UTP4Q969X6 686 aaKnown RBP3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 ZFATQ9P243 1243 aa3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 DMGDHQ9UI17 866 aaKnown RBP3.86□□□□□ -1.79
RNU6-561P-201ENST00000516222 XYLBO75191 536 aa3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 EGFRP00533 1210 aa3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 DGKZQ13574 1117 aa3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 RNF43Q68DV7 783 aa3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 CMTR1Q8N1G2 835 aaKnown RBP3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 DBNDD2Q9BQY9 259 aa3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 KLK14Q9P0G3 267 aa3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 RTCBQ9Y3I0 505 aaKnown RBP3.85□□□□□ -1.79
RNU6-561P-201ENST00000516222 J3QW42 95 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 SMNDC1O75940 238 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 CD68P34810 354 aaPredicted RBP3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 SOX18P35713 384 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 SETDB1Q15047 1291 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 Q6ZS46 218 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 CLEC10AQ8IUN9 316 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 KCNF1Q9H3M0 494 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 FAM13BQ9NYF5 915 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 ANGEL1Q9UNK9 670 aaKnown RBP3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 BCS1LQ9Y276 419 aa3.84□□□□□ -1.79
RNU6-561P-201ENST00000516222 FOXO3O43524 673 aa3.83□□□□□ -1.8
RNU6-561P-201ENST00000516222 MED26O95402 600 aa3.83□□□□□ -1.8
RNU6-561P-201ENST00000516222 UBTFP17480 764 aaKnown RBP3.83□□□□□ -1.8
RNU6-561P-201ENST00000516222 FLIIQ13045 1269 aa3.83□□□□□ -1.8
RNU6-561P-201ENST00000516222 DUOXA2Q1HG44 320 aa3.83□□□□□ -1.8
RNU6-561P-201ENST00000516222 ACAD11Q709F0 780 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms