RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.39■□□□□ 0.53
SDHA-218ENST00000515752 TAF7LQ5H9L4 462 aa18.38■□□□□ 0.53
SDHA-218ENST00000515752 FAM89AQ96GI7 184 aa18.38■□□□□ 0.53
SDHA-218ENST00000515752 CCDC87Q9NVE4 849 aa18.38■□□□□ 0.53
SDHA-218ENST00000515752 JCADQ9P266 1359 aa18.38■□□□□ 0.53
SDHA-218ENST00000515752 DOT1LQ8TEK3 1739 aa18.38■□□□□ 0.53
SDHA-218ENST00000515752 UBAP1LF5GYI3 381 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 HSP90B1P14625 803 aaKnown RBP18.37■□□□□ 0.53
SDHA-218ENST00000515752 KCNJ4P48050 445 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 EIF5P55010 431 aaKnown RBP18.37■□□□□ 0.53
SDHA-218ENST00000515752 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 HLFQ16534 295 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 NEUROD6Q96NK8 337 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 PSMA5P28066 241 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 SIK1P57059 783 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 VPS72Q15906 364 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
SDHA-218ENST00000515752 FAM227BQ96M60 508 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
SDHA-218ENST00000515752 PTH1RQ03431 593 aa18.36■□□□□ 0.53
SDHA-218ENST00000515752 KBTBD3Q8NAB2 608 aa18.36■□□□□ 0.53
SDHA-218ENST00000515752 UPF3BQ9BZI7 483 aaKnown RBP18.36■□□□□ 0.53
SDHA-218ENST00000515752 HMG20BQ9P0W2 317 aa18.36■□□□□ 0.53
SDHA-218ENST00000515752 TRAK2O60296 914 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
SDHA-218ENST00000515752 LRRC24Q50LG9 513 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 TRMT112Q9UI30 125 aaKnown RBP18.35■□□□□ 0.53
SDHA-218ENST00000515752 ZNF609O15014 1411 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 PDE8AO60658 829 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 CCDC158Q5M9N0 1113 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 RASEFQ8IZ41 740 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 NGLY1Q96IV0 654 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 TTC14Q96N46 770 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
SDHA-218ENST00000515752 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
SDHA-218ENST00000515752 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
SDHA-218ENST00000515752 PALLDQ8WX93 1383 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 A0A0D9SFI3 127 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 ANKRD18BA2A2Z9 1011 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 IRS4O14654 1257 aaPredicted RBP18.34■□□□□ 0.53
SDHA-218ENST00000515752 GPTP24298 496 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 CTSWP56202 376 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 PRPF40BQ6NWY9 871 aaKnown RBP18.34■□□□□ 0.53
SDHA-218ENST00000515752 INTS5Q6P9B9 1019 aaKnown RBP18.34■□□□□ 0.53
SDHA-218ENST00000515752 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 ZNF594Q96JF6 807 aaPredicted RBP18.34■□□□□ 0.53
SDHA-218ENST00000515752 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
SDHA-218ENST00000515752 ZSWIM6Q9HCJ5 1215 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 LIMCH1Q9UPQ0 1083 aa18.34■□□□□ 0.53
SDHA-218ENST00000515752 SSFA2P28290 1259 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 CRKLP46109 303 aaKnown RBP18.33■□□□□ 0.53
SDHA-218ENST00000515752 TIMM10P62072 90 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 TSGA10IPQ3SY00 556 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 MCMDC2Q4G0Z9 681 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 PARP10Q53GL7 1025 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 CREB3L3Q68CJ9 461 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 ACSBG1Q96GR2 724 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 ZSCAN31Q96LW9 406 aaPredicted RBP18.33■□□□□ 0.53
SDHA-218ENST00000515752 PAG1Q9NWQ8 432 aa18.33■□□□□ 0.53
SDHA-218ENST00000515752 ABCC12Q96J65 1359 aa18.33■□□□□ 0.52
SDHA-218ENST00000515752 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.52
SDHA-218ENST00000515752 CASTP20810 708 aaKnown RBP18.33■□□□□ 0.52
SDHA-218ENST00000515752 KRT32Q14532 448 aa18.33■□□□□ 0.52
SDHA-218ENST00000515752 FNBP4Q8N3X1 1017 aaPredicted RBP18.33■□□□□ 0.52
SDHA-218ENST00000515752 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.52
SDHA-218ENST00000515752 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
SDHA-218ENST00000515752 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
SDHA-218ENST00000515752 A0A0G2JS52 829 aa18.32■□□□□ 0.52
SDHA-218ENST00000515752 IFIT1P09914 478 aaKnown RBP18.32■□□□□ 0.52
SDHA-218ENST00000515752 GORABQ5T7V8 394 aa18.32■□□□□ 0.52
SDHA-218ENST00000515752 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
SDHA-218ENST00000515752 HELLSQ9NRZ9 838 aa18.32■□□□□ 0.52
SDHA-218ENST00000515752 ANKRD36CQ5JPF3 1778 aa18.31■□□□□ 0.52
SDHA-218ENST00000515752 RGL2O15211 777 aa18.31■□□□□ 0.52
SDHA-218ENST00000515752 TAF5LO75529 589 aa18.31■□□□□ 0.52
SDHA-218ENST00000515752 ITGA6P23229 1130 aa18.31■□□□□ 0.52
SDHA-218ENST00000515752 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
SDHA-218ENST00000515752 LDHAL6AQ6ZMR3 332 aa18.31■□□□□ 0.52
SDHA-218ENST00000515752 RUFY3Q7L099 469 aa18.31■□□□□ 0.52
SDHA-218ENST00000515752 JAKMIP1Q96N16 626 aaKnown RBP18.31■□□□□ 0.52
SDHA-218ENST00000515752 SH2B1Q9NRF2 756 aaPredicted RBP18.31■□□□□ 0.52
SDHA-218ENST00000515752 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.31■□□□□ 0.52
SDHA-218ENST00000515752 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
SDHA-218ENST00000515752 SLC27A2O14975 620 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
SDHA-218ENST00000515752 ANKRD1Q15327 319 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 PDRG1Q9NUG6 133 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 ZNF652Q9Y2D9 606 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 RIPOR2Q9Y4F9 1068 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 KAT6BQ8WYB5 2073 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 C8orf37Q96NL8 207 aa18.3■□□□□ 0.52
SDHA-218ENST00000515752 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
SDHA-218ENST00000515752 SPEF2Q9C093 1822 aa18.29■□□□□ 0.52
SDHA-218ENST00000515752 PDIA4P13667 645 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms