RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 MRVI1Q9Y6F6 885 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 G3V3G9 751 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 APPP05067 770 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 HSP90AA4PQ58FG1 418 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 DCAF8Q5TAQ9 597 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 TMOD3Q9NYL9 352 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 FAM135BQ49AJ0 1406 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 TET3O43151 1660 aa15.86■□□□□ 0.13
SH3TC1-225ENST00000515682 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 RAB11FIP4Q86YS3 637 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 CTAGE5O15320 804 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 GABPB1Q06547 395 aaPredicted RBP15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 RALYLQ86SE5 291 aaKnown RBP15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 CACTINQ8WUQ7 758 aaKnown RBP15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 PLEKHG1Q9ULL1 1385 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 HOXC9P31274 260 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 GSDMDP57764 484 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 NCBP1Q09161 790 aaKnown RBP15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 NEK1Q96PY6 1258 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 USP44Q9H0E7 712 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 EXOC5O00471 708 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 JAK2O60674 1132 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 CLSTN2Q9H4D0 955 aa15.85■□□□□ 0.13
SH3TC1-225ENST00000515682 HSP90B2PQ58FF3 399 aa15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 HYPKQ9NX55 129 aa15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 CWC15Q9P013 229 aaKnown RBP15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 KCNF1Q9H3M0 494 aa15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 TPCN1Q9ULQ1 816 aa15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 MAP3K2Q9Y2U5 619 aa15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 CCP110O43303 1012 aa15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 LMOD1P29536 600 aaPredicted RBP15.84■□□□□ 0.13
SH3TC1-225ENST00000515682 TRIM29Q14134 588 aa15.83■□□□□ 0.13
SH3TC1-225ENST00000515682 CPLX2Q6PUV4 134 aaKnown RBP15.83■□□□□ 0.13
SH3TC1-225ENST00000515682 AK7Q96M32 723 aa15.83■□□□□ 0.13
SH3TC1-225ENST00000515682 Q6ZUG5 572 aa15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 IP6K1Q92551 441 aa15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 SPTLC3Q9NUV7 552 aa15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 RNF17Q9BXT8 1623 aaKnown RBP15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 CAVIN2O95810 425 aa15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 CHMP4CQ96CF2 233 aa15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 ROBO2Q9HCK4 1378 aa15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.12
SH3TC1-225ENST00000515682 LEKR1Q6ZMV7 388 aa15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 ERO1AQ96HE7 468 aa15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 LSG1Q9H089 658 aaKnown RBP15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 IFNKQ9P0W0 207 aa15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 ARID5BQ14865 1188 aa15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 SLC3A2P08195 630 aaKnown RBP15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 ERCC6LQ2NKX8 1250 aa15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 NFXL1Q6ZNB6 911 aa15.82■□□□□ 0.12
SH3TC1-225ENST00000515682 CEP152O94986 1710 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 SSH2Q76I76 1423 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 SPHKAPQ2M3C7 1700 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 SLC27A2O14975 620 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 TRDNQ13061 729 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 CCDC34Q96HJ3 373 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 STARD3NLO95772 234 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 CHST3Q7LGC8 479 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 IL25Q9H293 177 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 SLAIN2Q9P270 581 aa15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 VIRMAQ69YN4 1812 aaKnown RBP15.81■□□□□ 0.12
SH3TC1-225ENST00000515682 PDE4CQ08493 712 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 DDX46Q7L014 1031 aaKnown RBP15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 ZSCAN16Q9H4T2 348 aaPredicted RBP15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 STAP2Q9UGK3 403 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 TOP1P11387 765 aaKnown RBP15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 LMAN1P49257 510 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 KIF1BO60333 1816 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 LRRC7Q96NW7 1537 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 MED14O60244 1454 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 VPS37DQ86XT2 251 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 KIAA0232Q92628 1395 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 A0A1B0GVL5 298 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 ZBTB22O15209 634 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 GNG11P61952 73 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 NDUFB9Q9Y6M9 179 aa15.8■□□□□ 0.12
SH3TC1-225ENST00000515682 TTC41PQ6P2S7 1318 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 TMEM87AQ8NBN3 555 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 TPM1P09493 284 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 C8orf76Q96K31 380 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 KLHDC4Q8TBB5 520 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 SSH3Q8TE77 659 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 EDC3Q96F86 508 aaKnown RBP15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 TRIM34Q9BYJ4 488 aa15.79■□□□□ 0.12
SH3TC1-225ENST00000515682 LRRC8AQ8IWT6 810 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 LMTK3Q96Q04 1460 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 FKBP4Q02790 459 aaKnown RBP eCLIP15.78■□□□□ 0.128e-7■■■□□ 16.6
SH3TC1-225ENST00000515682 CCDC102AQ96A19 550 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 AOX1Q06278 1338 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 RPS6KB1P23443 525 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 CCDC129Q6ZRS4 1044 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 CCDC150Q8NCX0 1101 aa15.78■□□□□ 0.12
SH3TC1-225ENST00000515682 CBFA2T2O43439 604 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms