RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
PDCD6-211ENST00000515587 RPGRQ92834 1020 aaKnown RBP18.99■□□□□ 0.63
PDCD6-211ENST00000515587 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
PDCD6-211ENST00000515587 BCS1LQ9Y276 419 aa18.99■□□□□ 0.63
PDCD6-211ENST00000515587 PCNTO95613 3336 aa18.99■□□□□ 0.63
PDCD6-211ENST00000515587 PLIN1O60240 522 aa18.98■□□□□ 0.63
PDCD6-211ENST00000515587 HSPA1AP0DMV8 641 aaKnown RBP18.98■□□□□ 0.63
PDCD6-211ENST00000515587 HSPA1BP0DMV9 641 aaKnown RBP18.98■□□□□ 0.63
PDCD6-211ENST00000515587 CHRNA5P30532 468 aa18.98■□□□□ 0.63
PDCD6-211ENST00000515587 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
PDCD6-211ENST00000515587 ZNF622Q969S3 477 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDCD6-211ENST00000515587 HDAC5Q9UQL6 1122 aa18.98■□□□□ 0.63
PDCD6-211ENST00000515587 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
PDCD6-211ENST00000515587 KLRG2A4D1S0 409 aaPredicted RBP18.97■□□□□ 0.63
PDCD6-211ENST00000515587 SRGNP10124 158 aa18.97■□□□□ 0.63
PDCD6-211ENST00000515587 NPR1P16066 1061 aa18.97■□□□□ 0.63
PDCD6-211ENST00000515587 STYK1Q6J9G0 422 aa18.97■□□□□ 0.63
PDCD6-211ENST00000515587 TMEM57Q8N5G2 664 aa18.97■□□□□ 0.63
PDCD6-211ENST00000515587 MASTLQ96GX5 879 aa18.97■□□□□ 0.63
PDCD6-211ENST00000515587 PIM2Q9P1W9 311 aa18.97■□□□□ 0.63
PDCD6-211ENST00000515587 BRCA1P38398 1863 aaKnown RBP18.97■□□□□ 0.63
PDCD6-211ENST00000515587 CRY2Q49AN0 593 aa18.96■□□□□ 0.63
PDCD6-211ENST00000515587 ITPRIPQ8IWB1 547 aa18.96■□□□□ 0.63
PDCD6-211ENST00000515587 RBM17Q96I25 401 aaKnown RBP18.96■□□□□ 0.63
PDCD6-211ENST00000515587 UTYO14607 1347 aa18.96■□□□□ 0.63
PDCD6-211ENST00000515587 GNAI3P08754 354 aa18.95■□□□□ 0.62
PDCD6-211ENST00000515587 UBTFL1P0CB47 393 aaPredicted RBP18.95■□□□□ 0.62
PDCD6-211ENST00000515587 CASP7P55210 303 aa18.95■□□□□ 0.62
PDCD6-211ENST00000515587 RRP1P56182 461 aaKnown RBP18.95■□□□□ 0.62
PDCD6-211ENST00000515587 PDE3AQ14432 1141 aa18.95■□□□□ 0.62
PDCD6-211ENST00000515587 CCDC152Q4G0S7 254 aa18.95■□□□□ 0.62
PDCD6-211ENST00000515587 PANK1Q8TE04 598 aa18.95■□□□□ 0.62
PDCD6-211ENST00000515587 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
PDCD6-211ENST00000515587 USP44Q9H0E7 712 aa18.95■□□□□ 0.62
PDCD6-211ENST00000515587 NBPF7P0C2Y1 421 aaPredicted RBP18.94■□□□□ 0.62
PDCD6-211ENST00000515587 ALDH1B1P30837 517 aa18.94■□□□□ 0.62
PDCD6-211ENST00000515587 CTSWP56202 376 aa18.94■□□□□ 0.62
PDCD6-211ENST00000515587 SF3B3Q15393 1217 aaKnown RBP18.94■□□□□ 0.62
PDCD6-211ENST00000515587 C3orf67Q6ZVT6 689 aa18.94■□□□□ 0.62
PDCD6-211ENST00000515587 DDX46Q7L014 1031 aaKnown RBP18.94■□□□□ 0.62
PDCD6-211ENST00000515587 PLA2G12BQ9BX93 195 aa18.94■□□□□ 0.62
PDCD6-211ENST00000515587 RLBP1P12271 317 aa18.93■□□□□ 0.62
PDCD6-211ENST00000515587 KCNA3P22001 575 aa18.93■□□□□ 0.62
PDCD6-211ENST00000515587 DALRD3Q5D0E6 543 aaKnown RBP18.93■□□□□ 0.62
PDCD6-211ENST00000515587 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
PDCD6-211ENST00000515587 TTLL6Q8N841 843 aa18.93■□□□□ 0.62
PDCD6-211ENST00000515587 HOXA10P31260 410 aaPredicted RBP18.92■□□□□ 0.62
PDCD6-211ENST00000515587 CRAMP1Q96RY5 1269 aa18.92■□□□□ 0.62
PDCD6-211ENST00000515587 CHMP4BQ9H444 224 aaKnown RBP18.92■□□□□ 0.62
PDCD6-211ENST00000515587 ARFGEF1Q9Y6D6 1849 aa18.91■□□□□ 0.62
PDCD6-211ENST00000515587 RRAGCQ9HB90 399 aa18.91■□□□□ 0.62
PDCD6-211ENST00000515587 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
PDCD6-211ENST00000515587 MVPQ14764 893 aaKnown RBP18.9■□□□□ 0.62
PDCD6-211ENST00000515587 TTLL11Q8NHH1 800 aa18.9■□□□□ 0.62
PDCD6-211ENST00000515587 SUCLG2Q96I99 432 aa18.9■□□□□ 0.62
PDCD6-211ENST00000515587 MEIS3Q99687 375 aa18.9■□□□□ 0.62
PDCD6-211ENST00000515587 DDX19BQ9UMR2 479 aa18.9■□□□□ 0.62
PDCD6-211ENST00000515587 COG6Q9Y2V7 657 aa18.9■□□□□ 0.62
PDCD6-211ENST00000515587 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
PDCD6-211ENST00000515587 TAF1P21675 1872 aa18.9■□□□□ 0.62
PDCD6-211ENST00000515587 SLX4Q8IY92 1834 aa18.89■□□□□ 0.61
PDCD6-211ENST00000515587 FOXO4P98177 505 aa18.89■□□□□ 0.61
PDCD6-211ENST00000515587 CCDC85AQ96PX6 553 aaPredicted RBP18.89■□□□□ 0.61
PDCD6-211ENST00000515587 TMX4Q9H1E5 349 aaPredicted RBP18.89■□□□□ 0.61
PDCD6-211ENST00000515587 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.61
PDCD6-211ENST00000515587 GNAI2P04899 355 aa18.88■□□□□ 0.61
PDCD6-211ENST00000515587 CSF1RP07333 972 aa18.88■□□□□ 0.61
PDCD6-211ENST00000515587 GRAPQ13588 217 aa18.88■□□□□ 0.61
PDCD6-211ENST00000515587 PRPF40BQ6NWY9 871 aaKnown RBP18.88■□□□□ 0.61
PDCD6-211ENST00000515587 LMBR1LQ6UX01 489 aa18.88■□□□□ 0.61
PDCD6-211ENST00000515587 GRAPLQ8TC17 118 aaPredicted RBP18.88■□□□□ 0.61
PDCD6-211ENST00000515587 CDC5LQ99459 802 aaKnown RBP18.88■□□□□ 0.61
PDCD6-211ENST00000515587 BICC1Q9H694 974 aaKnown RBP18.88■□□□□ 0.61
PDCD6-211ENST00000515587 RTL9Q8NET4 1388 aa18.88■□□□□ 0.61
PDCD6-211ENST00000515587 BBOX1O75936 387 aa18.87■□□□□ 0.61
PDCD6-211ENST00000515587 EPHA10Q5JZY3 1008 aa18.87■□□□□ 0.61
PDCD6-211ENST00000515587 C20orf194Q5TEA3 1177 aa18.87■□□□□ 0.61
PDCD6-211ENST00000515587 SMC1BQ8NDV3 1235 aa18.87■□□□□ 0.61
PDCD6-211ENST00000515587 SPEF2Q9C093 1822 aa18.87■□□□□ 0.61
PDCD6-211ENST00000515587 GREM2Q9H772 168 aa18.87■□□□□ 0.61
PDCD6-211ENST00000515587 LRRFIP2Q9Y608 721 aaKnown RBP18.87■□□□□ 0.61
PDCD6-211ENST00000515587 KDM2BQ8NHM5 1336 aa18.86■□□□□ 0.61
PDCD6-211ENST00000515587 ANKRD18BA2A2Z9 1011 aa18.86■□□□□ 0.61
PDCD6-211ENST00000515587 PPEF1O14829 653 aaPredicted RBP18.86■□□□□ 0.61
PDCD6-211ENST00000515587 ZBTB7BO15156 539 aaPredicted RBP18.86■□□□□ 0.61
PDCD6-211ENST00000515587 IFIT5Q13325 482 aaKnown RBP18.86■□□□□ 0.61
PDCD6-211ENST00000515587 CCDC57Q2TAC2 916 aa18.86■□□□□ 0.61
PDCD6-211ENST00000515587 SOGA3Q5TF21 947 aa18.86■□□□□ 0.61
PDCD6-211ENST00000515587 TMC4Q7Z404 712 aa18.86■□□□□ 0.61
PDCD6-211ENST00000515587 ANKRD18AQ8IVF6 992 aa18.86■□□□□ 0.61
PDCD6-211ENST00000515587 KAZALD1Q96I82 304 aa18.86■□□□□ 0.61
PDCD6-211ENST00000515587 ITGA6P23229 1130 aa18.85■□□□□ 0.61
PDCD6-211ENST00000515587 RPS8P62241 208 aaKnown RBP18.85■□□□□ 0.61
PDCD6-211ENST00000515587 FAM161AQ3B820 660 aa18.85■□□□□ 0.61
PDCD6-211ENST00000515587 RABL6Q3YEC7 729 aaPredicted RBP18.85■□□□□ 0.61
PDCD6-211ENST00000515587 TAF7LQ5H9L4 462 aa18.85■□□□□ 0.61
PDCD6-211ENST00000515587 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
PDCD6-211ENST00000515587 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
PDCD6-211ENST00000515587 C21orf2O43822 256 aa18.84■□□□□ 0.61
PDCD6-211ENST00000515587 IGHMBP2P38935 993 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms