RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-223ENST00000515143 ABCB7O75027 752 aa9.37□□□□□ -0.91
SPOCK3-223ENST00000515143 HCLS1P14317 486 aaPredicted RBP9.37□□□□□ -0.91
SPOCK3-223ENST00000515143 DDX46Q7L014 1031 aaKnown RBP9.37□□□□□ -0.91
SPOCK3-223ENST00000515143 JDP2Q8WYK2 163 aa9.37□□□□□ -0.91
SPOCK3-223ENST00000515143 NECTIN2Q92692 538 aa9.37□□□□□ -0.91
SPOCK3-223ENST00000515143 PGAP2Q9UHJ9 254 aa9.37□□□□□ -0.91
SPOCK3-223ENST00000515143 ZNF541Q9H0D2 1346 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 PCCAP05165 728 aaPredicted RBP9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 KIAA2012Q0VF49 1180 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 KSR2Q6VAB6 950 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 TSPYL6Q8N831 410 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 FAM89AQ96GI7 184 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 METTL22Q9BUU2 404 aaPredicted RBP9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 PHAXQ9H814 394 aaKnown RBP9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 CREBZFQ9NS37 354 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 HACL1Q9UJ83 578 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 ZNRF3Q9ULT6 936 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 COL4A5P29400 1685 aa9.36□□□□□ -0.91
SPOCK3-223ENST00000515143 ANP32CO43423 234 aa9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 DDX58O95786 925 aaKnown RBP9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 DSG3P32926 999 aa9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 RPS8P62241 208 aaKnown RBP9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 CACNA1SQ13698 1873 aa9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 MPNDQ8N594 471 aa9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 TMX4Q9H1E5 349 aaPredicted RBP9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
SPOCK3-223ENST00000515143 CDHR2Q9BYE9 1310 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 H7C1W4 665 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 IRS4O14654 1257 aaPredicted RBP9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 PDE8AO60658 829 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 VAMP4O75379 141 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 POTEIP0CG38 1075 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 EPHX2P34913 555 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 SCNN1DP51172 638 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 EIF6P56537 245 aaKnown RBP9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 CXCL9Q07325 125 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 DPP8Q6V1X1 898 aaPredicted RBP9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 USP50Q70EL3 339 aaPredicted RBP9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
SPOCK3-223ENST00000515143 ELL2O00472 640 aaPredicted RBP9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 IGKV5-2P06315 115 aa9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 POLA2Q14181 598 aa9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 ZC3H15Q8WU90 426 aaKnown RBP9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 DPF2Q92785 391 aa9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 PLA2G12BQ9BX93 195 aa9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 MRS2Q9HD23 443 aa9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 CWC25Q9NXE8 425 aaPredicted RBP9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 RTL9Q8NET4 1388 aa9.33□□□□□ -0.92
SPOCK3-223ENST00000515143 ZNF521Q96K83 1311 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 PI4KAP2A4QPH2 592 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 TNIP1Q15025 636 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 AOC3Q16853 763 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 TWISTNBQ3B726 338 aaPredicted RBP9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 SLC51AQ86UW1 340 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 NIM1KQ8IY84 436 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 CNTROBQ8N137 903 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 PI4KAP1Q8N8J0 262 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 CELF1Q92879 486 aaKnown RBP9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 GPRC5DQ9NZD1 345 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 POLLQ9UGP5 575 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 LAMB2P55268 1798 aa9.32□□□□□ -0.92
SPOCK3-223ENST00000515143 LRRC37AA6NMS7 1700 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 CSF1RP07333 972 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 EPS15P42566 896 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 CASP7P55210 303 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 HTRA3P83110 453 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 TSR2Q969E8 191 aaKnown RBP9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 MYD88Q99836 296 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 STK31Q9BXU1 1019 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 ADARB2Q9NS39 739 aaKnown RBP9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 MAP3K2Q9Y2U5 619 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 ZNF609O15014 1411 aa9.31□□□□□ -0.92
SPOCK3-223ENST00000515143 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 DUOX1Q9NRD9 1551 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 TMEM88BA6NKF7 163 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 YDJCA8MPS7 323 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 NEURL1BA8MQ27 555 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 VIL1P09327 827 aaKnown RBP9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 WASHC4Q2M389 1173 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 CCDC152Q4G0S7 254 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 CIAPIN1Q6FI81 312 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 G2E3Q7L622 706 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 LINS1Q8NG48 757 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 TBC1D16Q8TBP0 767 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 BSDC1Q9NW68 430 aaPredicted RBP9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
SPOCK3-223ENST00000515143 CNTNAP1P78357 1384 aa9.29□□□□□ -0.92
SPOCK3-223ENST00000515143 LTBP1Q14766 1721 aa9.29□□□□□ -0.92
SPOCK3-223ENST00000515143 RPS12P25398 132 aaKnown RBP9.29□□□□□ -0.92
SPOCK3-223ENST00000515143 LMOD1P29536 600 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms