RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 POLR3GLQ9BT43 218 aa16.06■□□□□ 0.16
SMAD5-210ENST00000515005 NYXQ9GZU5 481 aa16.06■□□□□ 0.16
SMAD5-210ENST00000515005 EN2P19622 333 aaPredicted RBP16.05■□□□□ 0.16
SMAD5-210ENST00000515005 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
SMAD5-210ENST00000515005 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
SMAD5-210ENST00000515005 RBM26Q5T8P6 1007 aaKnown RBP16.05■□□□□ 0.16
SMAD5-210ENST00000515005 TMX4Q9H1E5 349 aaPredicted RBP16.05■□□□□ 0.16
SMAD5-210ENST00000515005 CENPFP49454 3210 aa16.05■□□□□ 0.16
SMAD5-210ENST00000515005 FKTNO75072 461 aa16.04■□□□□ 0.16
SMAD5-210ENST00000515005 INTS3Q68E01 1043 aaKnown RBP16.04■□□□□ 0.16
SMAD5-210ENST00000515005 R3HDMLQ9H3Y0 253 aa16.04■□□□□ 0.16
SMAD5-210ENST00000515005 NUP98P52948 1817 aa16.03■□□□□ 0.16
SMAD5-210ENST00000515005 BTBD11A6QL63 1104 aa16.03■□□□□ 0.16
SMAD5-210ENST00000515005 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
SMAD5-210ENST00000515005 DPF2Q92785 391 aa16.03■□□□□ 0.16
SMAD5-210ENST00000515005 CDCA5Q96FF9 252 aa16.03■□□□□ 0.16
SMAD5-210ENST00000515005 OTUD5Q96G74 571 aa16.03■□□□□ 0.16
SMAD5-210ENST00000515005 COL6A3P12111 3177 aa16.03■□□□□ 0.16
SMAD5-210ENST00000515005 BRCA2P51587 3418 aa16.02■□□□□ 0.16
SMAD5-210ENST00000515005 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.16
SMAD5-210ENST00000515005 SULF1Q8IWU6 871 aa16.02■□□□□ 0.16
SMAD5-210ENST00000515005 PANK3Q9H999 370 aa16.02■□□□□ 0.16
SMAD5-210ENST00000515005 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
SMAD5-210ENST00000515005 PSMD14O00487 310 aa16.01■□□□□ 0.15
SMAD5-210ENST00000515005 SNRPA1P09661 255 aaKnown RBP16.01■□□□□ 0.15
SMAD5-210ENST00000515005 TM4SF4P48230 202 aa16.01■□□□□ 0.15
SMAD5-210ENST00000515005 MPNDQ8N594 471 aa16.01■□□□□ 0.15
SMAD5-210ENST00000515005 GGA3Q9NZ52 723 aa16.01■□□□□ 0.15
SMAD5-210ENST00000515005 H0YGN5 161 aa16■□□□□ 0.15
SMAD5-210ENST00000515005 GPTP24298 496 aa16■□□□□ 0.15
SMAD5-210ENST00000515005 SUSD4Q5VX71 490 aa16■□□□□ 0.15
SMAD5-210ENST00000515005 MOB2Q70IA6 237 aa16■□□□□ 0.15
SMAD5-210ENST00000515005 UBN2Q6ZU65 1347 aa15.99■□□□□ 0.15
SMAD5-210ENST00000515005 TRIM17Q9Y577 477 aa15.99■□□□□ 0.15
SMAD5-210ENST00000515005 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
SMAD5-210ENST00000515005 RANBP2P49792 3224 aaKnown RBP15.98■□□□□ 0.15
SMAD5-210ENST00000515005 ABCC4O15439 1325 aa15.98■□□□□ 0.15
SMAD5-210ENST00000515005 KIF4BQ2VIQ3 1234 aa15.98■□□□□ 0.15
SMAD5-210ENST00000515005 SP8Q8IXZ3 490 aa15.98■□□□□ 0.15
SMAD5-210ENST00000515005 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
SMAD5-210ENST00000515005 IBTKQ9P2D0 1353 aaPredicted RBP15.98■□□□□ 0.15
SMAD5-210ENST00000515005 UBE2Q2LH0YL09 131 aa15.97■□□□□ 0.15
SMAD5-210ENST00000515005 FKBP1BP68106 108 aa15.97■□□□□ 0.15
SMAD5-210ENST00000515005 MKRN3Q13064 507 aaKnown RBP15.97■□□□□ 0.15
SMAD5-210ENST00000515005 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
SMAD5-210ENST00000515005 OTOP1Q7RTM1 612 aa15.97■□□□□ 0.15
SMAD5-210ENST00000515005 CFHR5Q9BXR6 569 aa15.97■□□□□ 0.15
SMAD5-210ENST00000515005 ERVV-1B6SEH8 477 aa15.96■□□□□ 0.15
SMAD5-210ENST00000515005 NTSR2O95665 410 aa15.96■□□□□ 0.15
SMAD5-210ENST00000515005 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.15
SMAD5-210ENST00000515005 NLRP3Q96P20 1036 aa15.96■□□□□ 0.15
SMAD5-210ENST00000515005 DBNDD1Q9H9R9 158 aa15.96■□□□□ 0.15
SMAD5-210ENST00000515005 KCNQ5Q9NR82 932 aa15.96■□□□□ 0.15
SMAD5-210ENST00000515005 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.14
SMAD5-210ENST00000515005 BBOX1O75936 387 aa15.95■□□□□ 0.14
SMAD5-210ENST00000515005 RPS12P25398 132 aaKnown RBP15.95■□□□□ 0.14
SMAD5-210ENST00000515005 RBM27Q9P2N5 1060 aaKnown RBP15.95■□□□□ 0.14
SMAD5-210ENST00000515005 TAF1P21675 1872 aa15.95■□□□□ 0.14
SMAD5-210ENST00000515005 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
SMAD5-210ENST00000515005 DIAPH1O60610 1272 aaKnown RBP15.94■□□□□ 0.14
SMAD5-210ENST00000515005 ANGEL2Q5VTE6 544 aaKnown RBP15.94■□□□□ 0.14
SMAD5-210ENST00000515005 TTLL7Q6ZT98 887 aa15.94■□□□□ 0.14
SMAD5-210ENST00000515005 ARMC5Q96C12 935 aa15.94■□□□□ 0.14
SMAD5-210ENST00000515005 RTL9Q8NET4 1388 aa15.93■□□□□ 0.14
SMAD5-210ENST00000515005 MNX1P50219 401 aaPredicted RBP15.93■□□□□ 0.14
SMAD5-210ENST00000515005 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
SMAD5-210ENST00000515005 SCAF8Q9UPN6 1271 aaKnown RBP15.93■□□□□ 0.14
SMAD5-210ENST00000515005 PTPN22Q9Y2R2 807 aa15.93■□□□□ 0.14
SMAD5-210ENST00000515005 SREBF2Q12772 1141 aa15.92■□□□□ 0.14
SMAD5-210ENST00000515005 ZBTB3Q9H5J0 574 aa15.92■□□□□ 0.14
SMAD5-210ENST00000515005 LAMB2P55268 1798 aa15.92■□□□□ 0.14
SMAD5-210ENST00000515005 SCARF1Q14162 830 aa15.91■□□□□ 0.14
SMAD5-210ENST00000515005 WASHC4Q2M389 1173 aa15.91■□□□□ 0.14
SMAD5-210ENST00000515005 SLC10A5Q5PT55 438 aa15.91■□□□□ 0.14
SMAD5-210ENST00000515005 PRAMEF18Q5VWM3 479 aa15.91■□□□□ 0.14
SMAD5-210ENST00000515005 SCN9AQ15858 1988 aa15.91■□□□□ 0.14
SMAD5-210ENST00000515005 RIMBP2O15034 1052 aa15.9■□□□□ 0.14
SMAD5-210ENST00000515005 KIF6Q6ZMV9 814 aa15.9■□□□□ 0.14
SMAD5-210ENST00000515005 TMEM106CQ9BVX2 250 aa15.9■□□□□ 0.14
SMAD5-210ENST00000515005 TTLL12Q14166 644 aaPredicted RBP15.89■□□□□ 0.13
SMAD5-210ENST00000515005 DOK7Q18PE1 504 aa15.89■□□□□ 0.13
SMAD5-210ENST00000515005 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
SMAD5-210ENST00000515005 ANKRD36CQ5JPF3 1778 aa15.89■□□□□ 0.13
SMAD5-210ENST00000515005 LAMB4A4D0S4 1761 aa15.88■□□□□ 0.13
SMAD5-210ENST00000515005 ECE2O60344 883 aa15.88■□□□□ 0.13
SMAD5-210ENST00000515005 RRP7AQ9Y3A4 280 aaKnown RBP15.88■□□□□ 0.13
SMAD5-210ENST00000515005 PITPNM2Q9BZ72 1349 aa15.88■□□□□ 0.13
SMAD5-210ENST00000515005 ALDH1A1P00352 501 aa15.87■□□□□ 0.13
SMAD5-210ENST00000515005 VIL1P09327 827 aaKnown RBP15.87■□□□□ 0.13
SMAD5-210ENST00000515005 GRAPQ13588 217 aa15.87■□□□□ 0.13
SMAD5-210ENST00000515005 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
SMAD5-210ENST00000515005 CD99L2Q8TCZ2 262 aa15.87■□□□□ 0.13
SMAD5-210ENST00000515005 ZNF333Q96JL9 665 aa15.87■□□□□ 0.13
SMAD5-210ENST00000515005 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
SMAD5-210ENST00000515005 LRRC37AA6NMS7 1700 aa15.87■□□□□ 0.13
SMAD5-210ENST00000515005 ZNF609O15014 1411 aa15.86■□□□□ 0.13
SMAD5-210ENST00000515005 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
SMAD5-210ENST00000515005 HCLS1P14317 486 aaPredicted RBP15.86■□□□□ 0.13
SMAD5-210ENST00000515005 ZNF280AP59817 542 aaPredicted RBP15.86■□□□□ 0.13
SMAD5-210ENST00000515005 CAP1Q01518 475 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms