RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 EMP3P54852 163 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 TGFB2P61812 414 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 DDR1Q08345 913 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 FKBP5Q13451 457 aaPredicted RBP9.02□□□□□ -0.97
SMAD1-213ENST00000514778 DOK7Q18PE1 504 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 PI4KAP1Q8N8J0 262 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 LINS1Q8NG48 757 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 BRIP1Q9BX63 1249 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 PPP1R1BQ9UD71 204 aaPredicted RBP9.02□□□□□ -0.97
SMAD1-213ENST00000514778 MAP3K2Q9Y2U5 619 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 RIC1Q4ADV7 1423 aa9.02□□□□□ -0.97
SMAD1-213ENST00000514778 ADCY9O60503 1353 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 ST5P78524 1137 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 SLC10A5Q5PT55 438 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 C10orf71Q711Q0 1435 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 G2E3Q7L622 706 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 NLRP10Q86W26 655 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 NBPF5PQ86XG9 351 aaPredicted RBP9.01□□□□□ -0.97
SMAD1-213ENST00000514778 CNBD1Q8NA66 436 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 DNAAF4Q8WXU2 420 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 API5Q9BZZ5 524 aaKnown RBP9.01□□□□□ -0.97
SMAD1-213ENST00000514778 NRXN2Q9P2S2 1712 aa9.01□□□□□ -0.97
SMAD1-213ENST00000514778 KLRG2A4D1S0 409 aaPredicted RBP9□□□□□ -0.97
SMAD1-213ENST00000514778 TCERG1O14776 1098 aaKnown RBP9□□□□□ -0.97
SMAD1-213ENST00000514778 MS4A1P11836 297 aa9□□□□□ -0.97
SMAD1-213ENST00000514778 PDE6BP35913 854 aa9□□□□□ -0.97
SMAD1-213ENST00000514778 PRR5LQ6MZQ0 368 aa9□□□□□ -0.97
SMAD1-213ENST00000514778 UTP14AQ9BVJ6 771 aaKnown RBP9□□□□□ -0.97
SMAD1-213ENST00000514778 CWC25Q9NXE8 425 aaPredicted RBP9□□□□□ -0.97
SMAD1-213ENST00000514778 PXDNLA1KZ92 1463 aa9□□□□□ -0.97
SMAD1-213ENST00000514778 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
SMAD1-213ENST00000514778 ALDH1L1O75891 902 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 NTSR2O95665 410 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 GPTP24298 496 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
SMAD1-213ENST00000514778 CCT4P50991 539 aaKnown RBP8.99□□□□□ -0.97
SMAD1-213ENST00000514778 BEND3Q5T5X7 828 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 SUSD4Q5VX71 490 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 TMEM92Q6UXU6 159 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 BICDL1Q6ZP65 573 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 ZNF710Q8N1W2 664 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 ZBTB38Q8NAP3 1195 aaPredicted RBP8.99□□□□□ -0.97
SMAD1-213ENST00000514778 MYD88Q99836 296 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 SYT17Q9BSW7 474 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 RCAN3Q9UKA8 241 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 NOB1Q9ULX3 412 aaKnown RBP8.99□□□□□ -0.97
SMAD1-213ENST00000514778 SH3TC1Q8TE82 1336 aa8.99□□□□□ -0.97
SMAD1-213ENST00000514778 NUP98P52948 1817 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 NEURL1BA8MQ27 555 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 NPHP1O15259 732 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 PCCAP05165 728 aaPredicted RBP8.98□□□□□ -0.97
SMAD1-213ENST00000514778 IGKV5-2P06315 115 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 ZKSCAN2Q63HK3 967 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 ATF7IPQ6VMQ6 1270 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 YTHDC1Q96MU7 727 aaKnown RBP8.98□□□□□ -0.97
SMAD1-213ENST00000514778 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
SMAD1-213ENST00000514778 SRCIN1Q9C0H9 1055 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 TRMT112Q9UI30 125 aaKnown RBP8.98□□□□□ -0.97
SMAD1-213ENST00000514778 HDAC5Q9UQL6 1122 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 ARFGEF2Q9Y6D5 1785 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 CDHR2Q9BYE9 1310 aa8.98□□□□□ -0.97
SMAD1-213ENST00000514778 ANKRD36CQ5JPF3 1778 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 KIF13BQ9NQT8 1826 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 ATP5J2-PTCD1G3V325 749 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 H0YIN7 160 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 H7C1W4 665 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 RIMBP2O15034 1052 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 HOXB1P14653 301 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-213ENST00000514778 GCKRQ14397 625 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 CRY2Q49AN0 593 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-213ENST00000514778 NLRP3Q96P20 1036 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 BCL2L13Q9BXK5 485 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 UTYO14607 1347 aa8.97□□□□□ -0.97
SMAD1-213ENST00000514778 BCAR3O75815 825 aa8.96□□□□□ -0.98
SMAD1-213ENST00000514778 HOXA10P31260 410 aaPredicted RBP8.96□□□□□ -0.98
SMAD1-213ENST00000514778 ERFEQ4G0M1 354 aa8.96□□□□□ -0.98
SMAD1-213ENST00000514778 INTS3Q68E01 1043 aaKnown RBP8.96□□□□□ -0.98
SMAD1-213ENST00000514778 STYK1Q6J9G0 422 aa8.96□□□□□ -0.98
SMAD1-213ENST00000514778 ABCC4O15439 1325 aa8.96□□□□□ -0.98
SMAD1-213ENST00000514778 F6X3S4 739 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 GRM8O00222 908 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 SRGNP10124 158 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 TRIM27P14373 513 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 NPR1P16066 1061 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 ALDH1B1P30837 517 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 SF3B3Q15393 1217 aaKnown RBP8.95□□□□□ -0.98
SMAD1-213ENST00000514778 SLC4A10Q6U841 1118 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 CNKSR1Q969H4 720 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 FAM89AQ96GI7 184 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 MASTLQ96GX5 879 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 PLA2G12BQ9BX93 195 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 ZSWIM6Q9HCJ5 1215 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 PIM2Q9P1W9 311 aa8.95□□□□□ -0.98
SMAD1-213ENST00000514778 AFDNP55196 1824 aaKnown RBP8.94□□□□□ -0.98
SMAD1-213ENST00000514778 FAM205CA6NFA0 338 aa8.94□□□□□ -0.98
SMAD1-213ENST00000514778 IRS4O14654 1257 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms