RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 TRPM4Q8TD43 1214 aa17.36■□□□□ 0.37
SMAD5-209ENST00000514777 ZC3H15Q8WU90 426 aaKnown RBP17.36■□□□□ 0.37
SMAD5-209ENST00000514777 PLEKHF1Q96S99 279 aa17.36■□□□□ 0.37
SMAD5-209ENST00000514777 YDJCA8MPS7 323 aa17.35■□□□□ 0.37
SMAD5-209ENST00000514777 RAD17O75943 681 aa17.35■□□□□ 0.37
SMAD5-209ENST00000514777 KIAA2012Q0VF49 1180 aa17.35■□□□□ 0.37
SMAD5-209ENST00000514777 DGKZQ13574 1117 aa17.35■□□□□ 0.37
SMAD5-209ENST00000514777 PARP10Q53GL7 1025 aa17.35■□□□□ 0.37
SMAD5-209ENST00000514777 SUPT20HQ8NEM7 779 aa17.35■□□□□ 0.37
SMAD5-209ENST00000514777 UTP14AQ9BVJ6 771 aaKnown RBP17.35■□□□□ 0.37
SMAD5-209ENST00000514777 ZNF408Q9H9D4 720 aa17.35■□□□□ 0.37
SMAD5-209ENST00000514777 BBOX1O75936 387 aa17.34■□□□□ 0.37
SMAD5-209ENST00000514777 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
SMAD5-209ENST00000514777 CFAP44Q96MT7 982 aa17.34■□□□□ 0.37
SMAD5-209ENST00000514777 CNOT7Q9UIV1 285 aaKnown RBP17.34■□□□□ 0.37
SMAD5-209ENST00000514777 ERBB4Q15303 1308 aa17.33■□□□□ 0.36
SMAD5-209ENST00000514777 CDHR2Q9BYE9 1310 aa17.33■□□□□ 0.36
SMAD5-209ENST00000514777 DPP8Q6V1X1 898 aaPredicted RBP17.33■□□□□ 0.36
SMAD5-209ENST00000514777 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
SMAD5-209ENST00000514777 MPNDQ8N594 471 aa17.33■□□□□ 0.36
SMAD5-209ENST00000514777 BCL2L13Q9BXK5 485 aa17.33■□□□□ 0.36
SMAD5-209ENST00000514777 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
SMAD5-209ENST00000514777 ANXA1P04083 346 aa17.32■□□□□ 0.36
SMAD5-209ENST00000514777 HCLS1P14317 486 aaPredicted RBP17.32■□□□□ 0.36
SMAD5-209ENST00000514777 TNIP1Q15025 636 aa17.32■□□□□ 0.36
SMAD5-209ENST00000514777 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
SMAD5-209ENST00000514777 PCDH10Q9P2E7 1040 aa17.32■□□□□ 0.36
SMAD5-209ENST00000514777 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
SMAD5-209ENST00000514777 PDE4DIPQ5VU43 2346 aa17.31■□□□□ 0.36
SMAD5-209ENST00000514777 FAM155AB1AL88 458 aaPredicted RBP17.31■□□□□ 0.36
SMAD5-209ENST00000514777 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
SMAD5-209ENST00000514777 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
SMAD5-209ENST00000514777 AKAP11Q9UKA4 1901 aa17.3■□□□□ 0.36
SMAD5-209ENST00000514777 HUNKP57058 714 aa17.3■□□□□ 0.36
SMAD5-209ENST00000514777 NOGQ13253 232 aa17.3■□□□□ 0.36
SMAD5-209ENST00000514777 EGFRP00533 1210 aa17.29■□□□□ 0.36
SMAD5-209ENST00000514777 EIF2S2P20042 333 aaKnown RBP17.29■□□□□ 0.36
SMAD5-209ENST00000514777 SAMD7Q7Z3H4 446 aa17.29■□□□□ 0.36
SMAD5-209ENST00000514777 NLRP10Q86W26 655 aa17.29■□□□□ 0.36
SMAD5-209ENST00000514777 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
SMAD5-209ENST00000514777 LRRC37AA6NMS7 1700 aa17.29■□□□□ 0.36
SMAD5-209ENST00000514777 H7C1D1 291 aa17.28■□□□□ 0.36
SMAD5-209ENST00000514777 GRAPQ13588 217 aa17.28■□□□□ 0.36
SMAD5-209ENST00000514777 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
SMAD5-209ENST00000514777 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
SMAD5-209ENST00000514777 PSMD14O00487 310 aa17.27■□□□□ 0.36
SMAD5-209ENST00000514777 RGMBQ6NW40 437 aa17.27■□□□□ 0.36
SMAD5-209ENST00000514777 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
SMAD5-209ENST00000514777 COPS6Q7L5N1 327 aa17.27■□□□□ 0.36
SMAD5-209ENST00000514777 DPF2Q92785 391 aa17.27■□□□□ 0.36
SMAD5-209ENST00000514777 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
SMAD5-209ENST00000514777 COL4A1P02462 1669 aa17.26■□□□□ 0.35
SMAD5-209ENST00000514777 NEFMP07197 916 aa17.26■□□□□ 0.35
SMAD5-209ENST00000514777 KIF23Q02241 960 aaPredicted RBP17.26■□□□□ 0.35
SMAD5-209ENST00000514777 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
SMAD5-209ENST00000514777 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
SMAD5-209ENST00000514777 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
SMAD5-209ENST00000514777 AIMP1Q12904 312 aaKnown RBP17.25■□□□□ 0.35
SMAD5-209ENST00000514777 XAGE3Q8WTP9 111 aa17.25■□□□□ 0.35
SMAD5-209ENST00000514777 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
SMAD5-209ENST00000514777 GBA2Q9HCG7 927 aaPredicted RBP17.25■□□□□ 0.35
SMAD5-209ENST00000514777 RNF186Q9NXI6 227 aa17.25■□□□□ 0.35
SMAD5-209ENST00000514777 TRMT112Q9UI30 125 aaKnown RBP17.25■□□□□ 0.35
SMAD5-209ENST00000514777 SCN9AQ15858 1988 aa17.25■□□□□ 0.35
SMAD5-209ENST00000514777 SH3TC1Q8TE82 1336 aa17.24■□□□□ 0.35
SMAD5-209ENST00000514777 ADM5C9JUS6 153 aa17.24■□□□□ 0.35
SMAD5-209ENST00000514777 KRT26Q7Z3Y9 468 aa17.24■□□□□ 0.35
SMAD5-209ENST00000514777 DBNDD1Q9H9R9 158 aa17.24■□□□□ 0.35
SMAD5-209ENST00000514777 SAGE1Q9NXZ1 904 aa17.24■□□□□ 0.35
SMAD5-209ENST00000514777 TRPA1O75762 1119 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 SOX10P56693 466 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 NECTIN2Q92692 538 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
SMAD5-209ENST00000514777 CSRNP1Q96S65 589 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 POLLQ9UGP5 575 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 RTL9Q8NET4 1388 aa17.23■□□□□ 0.35
SMAD5-209ENST00000514777 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
SMAD5-209ENST00000514777 ZNF157P51786 506 aaPredicted RBP17.22■□□□□ 0.35
SMAD5-209ENST00000514777 RBM26Q5T8P6 1007 aaKnown RBP17.22■□□□□ 0.35
SMAD5-209ENST00000514777 TMC4Q7Z404 712 aa17.22■□□□□ 0.35
SMAD5-209ENST00000514777 C2orf69Q8N8R5 385 aa17.22■□□□□ 0.35
SMAD5-209ENST00000514777 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
SMAD5-209ENST00000514777 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
SMAD5-209ENST00000514777 GPSM2P81274 684 aa17.21■□□□□ 0.35
SMAD5-209ENST00000514777 DOK7Q18PE1 504 aa17.21■□□□□ 0.35
SMAD5-209ENST00000514777 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.34
SMAD5-209ENST00000514777 SLC10A3P09131 477 aa17.2■□□□□ 0.34
SMAD5-209ENST00000514777 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
SMAD5-209ENST00000514777 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
SMAD5-209ENST00000514777 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
SMAD5-209ENST00000514777 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
SMAD5-209ENST00000514777 ECE2O60344 883 aa17.19■□□□□ 0.34
SMAD5-209ENST00000514777 RPS12P25398 132 aaKnown RBP17.19■□□□□ 0.34
SMAD5-209ENST00000514777 RIPK4P57078 832 aa17.19■□□□□ 0.34
SMAD5-209ENST00000514777 FAM89AQ96GI7 184 aa17.19■□□□□ 0.34
SMAD5-209ENST00000514777 C6orf229H3BNL8 230 aa17.18■□□□□ 0.34
SMAD5-209ENST00000514777 VIL1P09327 827 aaKnown RBP17.18■□□□□ 0.34
SMAD5-209ENST00000514777 ISCA1Q9BUE6 129 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms