RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 USP3Q9Y6I4 520 aa7.3□□□□□ -1.24
PROM1-217ENST00000514693 NEURL1BA8MQ27 555 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 SORBS3O60504 671 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 CD33P20138 364 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 ADH6P28332 368 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 EHHADHQ08426 723 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 AAMPQ13685 434 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 TMC4Q7Z404 712 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 TNS4Q8IZW8 715 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 NEUROD4Q9HD90 331 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 CCDC87Q9NVE4 849 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 SCHIP1Q9P0W5 487 aaPredicted RBP7.29□□□□□ -1.24
PROM1-217ENST00000514693 PRR12Q9ULL5 1215 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 ZNF232Q9UNY5 417 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 ATAD2Q6PL18 1390 aa7.29□□□□□ -1.24
PROM1-217ENST00000514693 FZD6O60353 706 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 EPXP11678 715 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 ITGAEP38570 1179 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 EIF1AXP47813 144 aaKnown RBP7.28□□□□□ -1.24
PROM1-217ENST00000514693 DAB2P98082 770 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 FANCCQ00597 558 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 TNP2Q05952 138 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 C16orf46Q6P387 395 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 ALYREFQ86V81 257 aaKnown RBP7.28□□□□□ -1.24
PROM1-217ENST00000514693 ZNF295-AS1Q8N0V1 137 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 CHMP7Q8WUX9 453 aaPredicted RBP7.28□□□□□ -1.24
PROM1-217ENST00000514693 RNF34Q969K3 372 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 DMRTB1Q96MA1 342 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 ZIC5Q96T25 663 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 SPOCK3Q9BQ16 436 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 TINF2Q9BSI4 451 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 VTI1BQ9UEU0 232 aa7.28□□□□□ -1.24
PROM1-217ENST00000514693 FAM157BP0CG42 384 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 NCLP19338 710 aaKnown RBP7.27□□□□□ -1.25
PROM1-217ENST00000514693 PSMD2Q13200 908 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 GRIN2CQ14957 1233 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 FAM182BQ5T319 152 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 ALKBH2Q6NS38 261 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 L3MBTL2Q969R5 705 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 BTBD6Q96KE9 485 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 DNAJC2Q99543 621 aaKnown RBP7.27□□□□□ -1.25
PROM1-217ENST00000514693 TGIF2Q9GZN2 237 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 CCSER2Q9H7U1 834 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 CAPN10Q9HC96 672 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.27□□□□□ -1.25
PROM1-217ENST00000514693 METTL5Q9NRN9 209 aaKnown RBP7.27□□□□□ -1.25
PROM1-217ENST00000514693 PRKAG2Q9UGJ0 569 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 WWC3Q9ULE0 1092 aa7.27□□□□□ -1.25
PROM1-217ENST00000514693 GNB5O14775 395 aa7.26□□□□□ -1.25
PROM1-217ENST00000514693 IGHA2P01877 340 aa7.26□□□□□ -1.25
PROM1-217ENST00000514693 SLC9A9Q8IVB4 645 aa7.26□□□□□ -1.25
PROM1-217ENST00000514693 SLC43A3Q8NBI5 491 aa7.26□□□□□ -1.25
PROM1-217ENST00000514693 TSPAN10Q9H1Z9 355 aaPredicted RBP7.26□□□□□ -1.25
PROM1-217ENST00000514693 AVENQ9NQS1 362 aaPredicted RBP7.26□□□□□ -1.25
PROM1-217ENST00000514693 GPR182O15218 404 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 NOS2P35228 1153 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 ZNF76P36508 570 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 TXLNAP40222 546 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 ATP2B2Q01814 1243 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 PDE3BQ13370 1112 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 TEAD4Q15561 434 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 TBCELQ5QJ74 424 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 SAMD5Q5TGI4 173 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 DHX38Q92620 1227 aaKnown RBP7.25□□□□□ -1.25
PROM1-217ENST00000514693 SETDB2Q96T68 719 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 FAM129BQ96TA1 746 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 LNPKQ9C0E8 428 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 NOP53Q9NZM5 478 aaKnown RBP7.25□□□□□ -1.25
PROM1-217ENST00000514693 MARK1Q9P0L2 795 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 STIM2Q9P246 746 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 CHMP3Q9Y3E7 222 aa7.25□□□□□ -1.25
PROM1-217ENST00000514693 SERTM1A2A2V5 107 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 KRBA1A5PL33 1030 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 ANKRD62A6NC57 917 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 TNFRSF10BO14763 440 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 ATP2B1P20020 1258 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 EPHA4P54764 986 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 PCBP4P57723 403 aaKnown RBP7.24□□□□□ -1.25
PROM1-217ENST00000514693 LAMC2Q13753 1193 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 COX20Q5RI15 118 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 ZNF468Q5VIY5 522 aaPredicted RBP7.24□□□□□ -1.25
PROM1-217ENST00000514693 LINC00114Q6XXX2 140 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 LRRC69Q6ZNQ3 347 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 CHSY3Q70JA7 882 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 ZDHHC1Q8WTX9 485 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 ACBD3Q9H3P7 528 aa7.24□□□□□ -1.25
PROM1-217ENST00000514693 PPP1R12BO60237 982 aaPredicted RBP7.23□□□□□ -1.25
PROM1-217ENST00000514693 ITGB2P05107 769 aa7.23□□□□□ -1.25
PROM1-217ENST00000514693 COL8A1P27658 744 aa7.23□□□□□ -1.25
PROM1-217ENST00000514693 NOP9Q86U38 636 aaKnown RBP7.23□□□□□ -1.25
PROM1-217ENST00000514693 ALKBH8Q96BT7 664 aaKnown RBP7.23□□□□□ -1.25
PROM1-217ENST00000514693 NIF3L1Q9GZT8 377 aa7.23□□□□□ -1.25
PROM1-217ENST00000514693 SUV39H2Q9H5I1 410 aa7.23□□□□□ -1.25
PROM1-217ENST00000514693 NLRP2Q9NX02 1062 aa7.23□□□□□ -1.25
PROM1-217ENST00000514693 PROCP04070 461 aa7.22□□□□□ -1.25
PROM1-217ENST00000514693 ALAS2P22557 587 aa7.22□□□□□ -1.25
PROM1-217ENST00000514693 GTF2F1P35269 517 aaKnown RBP eCLIP7.22□□□□□ -1.25
PROM1-217ENST00000514693 TNNI2P48788 182 aa7.22□□□□□ -1.25
PROM1-217ENST00000514693 DGKGP49619 791 aa7.22□□□□□ -1.25
PROM1-217ENST00000514693 FCHSD1Q86WN1 690 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms