RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 KIAA2012Q0VF49 1180 aa14.23□□□□□ -0.13
NEDD9-215ENST00000514660 GRIPAP1Q4V328 841 aa14.23□□□□□ -0.13
NEDD9-215ENST00000514660 RASAL3Q86YV0 1011 aa14.23□□□□□ -0.13
NEDD9-215ENST00000514660 RBM17Q96I25 401 aaKnown RBP14.23□□□□□ -0.13
NEDD9-215ENST00000514660 KCNQ5Q9NR82 932 aa14.23□□□□□ -0.13
NEDD9-215ENST00000514660 LAMB4A4D0S4 1761 aa14.23□□□□□ -0.13
NEDD9-215ENST00000514660 COL4A1P02462 1669 aa14.23□□□□□ -0.13
NEDD9-215ENST00000514660 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 HSPA5P11021 654 aaKnown RBP14.22□□□□□ -0.13
NEDD9-215ENST00000514660 DCTN1Q14203 1278 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 MCM10Q7L590 875 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 C2orf69Q8N8R5 385 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 GCC1Q96CN9 775 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 NYXQ9GZU5 481 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 VPS33BQ9H267 617 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 R3HDMLQ9H3Y0 253 aa14.22□□□□□ -0.13
NEDD9-215ENST00000514660 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
NEDD9-215ENST00000514660 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.13
NEDD9-215ENST00000514660 POTEFA5A3E0 1075 aa14.21□□□□□ -0.13
NEDD9-215ENST00000514660 CNKSR2Q8WXI2 1034 aa14.21□□□□□ -0.13
NEDD9-215ENST00000514660 KNSTRNQ9Y448 316 aa14.21□□□□□ -0.13
NEDD9-215ENST00000514660 SCN9AQ15858 1988 aa14.21□□□□□ -0.13
NEDD9-215ENST00000514660 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
NEDD9-215ENST00000514660 PSMD14O00487 310 aa14.2□□□□□ -0.14
NEDD9-215ENST00000514660 RBM26Q5T8P6 1007 aaKnown RBP14.2□□□□□ -0.14
NEDD9-215ENST00000514660 MOB2Q70IA6 237 aa14.2□□□□□ -0.14
NEDD9-215ENST00000514660 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
NEDD9-215ENST00000514660 PAPPA2Q9BXP8 1791 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 H7C1D1 291 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 U2SURPO15042 1029 aaKnown RBP14.19□□□□□ -0.14
NEDD9-215ENST00000514660 TNIP1Q15025 636 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 DPP8Q6V1X1 898 aaPredicted RBP14.19□□□□□ -0.14
NEDD9-215ENST00000514660 MPNDQ8N594 471 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 ZBTB3Q9H5J0 574 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 RTL9Q8NET4 1388 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 ANKRD36CQ5JPF3 1778 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 HTTP42858 3142 aa14.19□□□□□ -0.14
NEDD9-215ENST00000514660 LRRC37AA6NMS7 1700 aa14.18□□□□□ -0.14
NEDD9-215ENST00000514660 PER1O15534 1290 aaPredicted RBP14.18□□□□□ -0.14
NEDD9-215ENST00000514660 PRKAR2BP31323 418 aa14.18□□□□□ -0.14
NEDD9-215ENST00000514660 PKN2Q16513 984 aaKnown RBP14.18□□□□□ -0.14
NEDD9-215ENST00000514660 FBXO46Q6PJ61 603 aaPredicted RBP14.18□□□□□ -0.14
NEDD9-215ENST00000514660 SP8Q8IXZ3 490 aa14.18□□□□□ -0.14
NEDD9-215ENST00000514660 DPF2Q92785 391 aa14.18□□□□□ -0.14
NEDD9-215ENST00000514660 CDCA5Q96FF9 252 aa14.18□□□□□ -0.14
NEDD9-215ENST00000514660 RSPH6AQ9H0K4 717 aa14.18□□□□□ -0.14
NEDD9-215ENST00000514660 KIAA0100Q14667 2235 aaKnown RBP14.18□□□□□ -0.14
NEDD9-215ENST00000514660 SLC10A5Q5PT55 438 aa14.17□□□□□ -0.14
NEDD9-215ENST00000514660 SUPT20HQ8NEM7 779 aa14.17□□□□□ -0.14
NEDD9-215ENST00000514660 DBNDD1Q9H9R9 158 aa14.17□□□□□ -0.14
NEDD9-215ENST00000514660 SCAF8Q9UPN6 1271 aaKnown RBP14.17□□□□□ -0.14
NEDD9-215ENST00000514660 GPR25O00155 361 aa14.16□□□□□ -0.14
NEDD9-215ENST00000514660 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
NEDD9-215ENST00000514660 GGA3Q9NZ52 723 aa14.16□□□□□ -0.14
NEDD9-215ENST00000514660 HDAC9Q9UKV0 1011 aa14.16□□□□□ -0.14
NEDD9-215ENST00000514660 RRP7AQ9Y3A4 280 aaKnown RBP14.16□□□□□ -0.14
NEDD9-215ENST00000514660 KDM3BQ7LBC6 1761 aa14.15□□□□□ -0.14
NEDD9-215ENST00000514660 RBBP6Q7Z6E9 1792 aaKnown RBP14.15□□□□□ -0.14
NEDD9-215ENST00000514660 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
NEDD9-215ENST00000514660 LRP10Q7Z4F1 713 aa14.15□□□□□ -0.14
NEDD9-215ENST00000514660 DCPSQ96C86 337 aaKnown RBP14.15□□□□□ -0.14
NEDD9-215ENST00000514660 NLRP3Q96P20 1036 aa14.15□□□□□ -0.14
NEDD9-215ENST00000514660 PCGF6Q9BYE7 350 aa14.15□□□□□ -0.14
NEDD9-215ENST00000514660 COLQQ9Y215 455 aaPredicted RBP14.15□□□□□ -0.14
NEDD9-215ENST00000514660 HCLS1P14317 486 aaPredicted RBP14.14□□□□□ -0.15
NEDD9-215ENST00000514660 MYL6BP14649 208 aa14.14□□□□□ -0.15
NEDD9-215ENST00000514660 GIGYF2Q6Y7W6 1299 aaKnown RBP14.14□□□□□ -0.15
NEDD9-215ENST00000514660 TRIOBPQ9H2D6 2365 aa14.14□□□□□ -0.15
NEDD9-215ENST00000514660 BBOX1O75936 387 aa14.13□□□□□ -0.15
NEDD9-215ENST00000514660 KIF4BQ2VIQ3 1234 aa14.13□□□□□ -0.15
NEDD9-215ENST00000514660 ZNF428Q96B54 188 aa14.13□□□□□ -0.15
NEDD9-215ENST00000514660 THUMPD2Q9BTF0 503 aaKnown RBP14.13□□□□□ -0.15
NEDD9-215ENST00000514660 SZT2Q5T011 3432 aa14.13□□□□□ -0.15
NEDD9-215ENST00000514660 UBE2Q2LH0YL09 131 aa14.12□□□□□ -0.15
NEDD9-215ENST00000514660 RIMBP2O15034 1052 aa14.12□□□□□ -0.15
NEDD9-215ENST00000514660 TM4SF4P48230 202 aa14.12□□□□□ -0.15
NEDD9-215ENST00000514660 CAP1Q01518 475 aa14.12□□□□□ -0.15
NEDD9-215ENST00000514660 DOK7Q18PE1 504 aa14.12□□□□□ -0.15
NEDD9-215ENST00000514660 PRAMEF18Q5VWM3 479 aa14.12□□□□□ -0.15
NEDD9-215ENST00000514660 POLLQ9UGP5 575 aa14.12□□□□□ -0.15
NEDD9-215ENST00000514660 EN2P19622 333 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-215ENST00000514660 EIF4G2P78344 907 aaKnown RBP eCLIP14.11□□□□□ -0.15
NEDD9-215ENST00000514660 MKRN3Q13064 507 aaKnown RBP14.11□□□□□ -0.15
NEDD9-215ENST00000514660 NOM1Q5C9Z4 860 aaKnown RBP14.11□□□□□ -0.15
NEDD9-215ENST00000514660 ANGEL2Q5VTE6 544 aaKnown RBP14.11□□□□□ -0.15
NEDD9-215ENST00000514660 KIF6Q6ZMV9 814 aa14.11□□□□□ -0.15
NEDD9-215ENST00000514660 SULF1Q8IWU6 871 aa14.11□□□□□ -0.15
NEDD9-215ENST00000514660 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-215ENST00000514660 DDX60Q8IY21 1712 aaKnown RBP14.1□□□□□ -0.15
NEDD9-215ENST00000514660 BRCA2P51587 3418 aa14.1□□□□□ -0.15
NEDD9-215ENST00000514660 DLG5Q8TDM6 1919 aa14.1□□□□□ -0.15
NEDD9-215ENST00000514660 ECE2O60344 883 aa14.1□□□□□ -0.15
NEDD9-215ENST00000514660 EIF4A1P60842 406 aaKnown RBP14.1□□□□□ -0.15
NEDD9-215ENST00000514660 GRAPQ13588 217 aa14.1□□□□□ -0.15
NEDD9-215ENST00000514660 PDIA6Q15084 440 aa14.1□□□□□ -0.15
NEDD9-215ENST00000514660 TAF7Q15545 349 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-215ENST00000514660 PROSER3Q2NL68 480 aa14.1□□□□□ -0.15
NEDD9-215ENST00000514660 GRAPLQ8TC17 118 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-215ENST00000514660 UTP14AQ9BVJ6 771 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms