RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 UBA5Q9GZZ9 404 aa8.69□□□□□ -1.02
CCDC30-214ENST00000514642 NKTRP30414 1462 aaKnown RBP8.69□□□□□ -1.02
CCDC30-214ENST00000514642 CFAP45Q9UL16 551 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 ADGBQ8N7X0 1667 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 CASTP20810 708 aaKnown RBP8.68□□□□□ -1.02
CCDC30-214ENST00000514642 LARP1BQ659C4 914 aaKnown RBP8.68□□□□□ -1.02
CCDC30-214ENST00000514642 GRM8O00222 908 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 PDE8AO60658 829 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 KIF4AO95239 1232 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 IL27Q8NEV9 243 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 FAM83GA6ND36 823 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 SULF1Q8IWU6 871 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 RUFY1Q96T51 708 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 DLGAP5Q15398 846 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 USP48Q86UV5 1035 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 SNRKQ9NRH2 765 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 NCOA7Q8NI08 942 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 SLC52A2Q9HAB3 445 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 SPC25Q9HBM1 224 aa8.68□□□□□ -1.02
CCDC30-214ENST00000514642 ZNF335Q9H4Z2 1342 aaPredicted RBP8.68□□□□□ -1.02
CCDC30-214ENST00000514642 HIBADHP31937 336 aaKnown RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 RBM6P78332 1123 aaKnown RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 IFIT1BQ5T764 474 aaKnown RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 ESR2Q92731 530 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 CCDC148Q8NFR7 591 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 CCDC97Q96F63 343 aaPredicted RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 EYA1Q99502 592 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 CETN2P41208 172 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 AFF2P51816 1311 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 AMPD3Q01432 767 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 TAF12Q16514 161 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 SEPT12Q8IYM1 358 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 PLBD2Q8NHP8 589 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 ECHDC1Q9NTX5 307 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 IQSEC3Q9UPP2 1182 aaPredicted RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 DHX8Q14562 1220 aaKnown RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 LMBR1LQ6UX01 489 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 TMTC2Q8N394 836 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 RBM27Q9P2N5 1060 aaKnown RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 PRAG1Q86YV5 1406 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 CCP110O43303 1012 aa8.67□□□□□ -1.02
CCDC30-214ENST00000514642 IRX3P78415 501 aaPredicted RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 PRPF40BQ6NWY9 871 aaKnown RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 ZNF526Q8TF50 670 aaPredicted RBP8.67□□□□□ -1.02
CCDC30-214ENST00000514642 ZBED4O75132 1171 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 PPFIBP1Q86W92 1011 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 STX8Q9UNK0 236 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 WDR33Q9C0J8 1336 aaKnown RBP8.66□□□□□ -1.02
CCDC30-214ENST00000514642 ERLIN2O94905 339 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 CETN1Q12798 172 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 DCAF15Q66K64 600 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 CBFA2T2O43439 604 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 KRT85P78386 507 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 SYCP3Q8IZU3 236 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 WDR66Q8TBY9 1149 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 RRP36Q96EU6 259 aaKnown RBP8.66□□□□□ -1.02
CCDC30-214ENST00000514642 ABT1Q9ULW3 272 aaKnown RBP8.66□□□□□ -1.02
CCDC30-214ENST00000514642 SSR1P43307 286 aaKnown RBP8.66□□□□□ -1.02
CCDC30-214ENST00000514642 PRKG1Q13976 671 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 WTAPQ15007 396 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 DALRD3Q5D0E6 543 aaKnown RBP8.66□□□□□ -1.02
CCDC30-214ENST00000514642 SMCR8Q8TEV9 937 aaPredicted RBP8.66□□□□□ -1.02
CCDC30-214ENST00000514642 PYM1Q9BRP8 204 aaKnown RBP8.66□□□□□ -1.02
CCDC30-214ENST00000514642 PRKAG2Q9UGJ0 569 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 PLXNC1O60486 1568 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 RTL9Q8NET4 1388 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 TEX11Q8IYF3 940 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 BABAM1Q9NWV8 329 aa8.66□□□□□ -1.02
CCDC30-214ENST00000514642 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
CCDC30-214ENST00000514642 ANXA1P04083 346 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 BMS1Q14692 1282 aaKnown RBP8.65□□□□□ -1.02
CCDC30-214ENST00000514642 LRSAM1Q6UWE0 723 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 ARMC9Q7Z3E5 817 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.02
CCDC30-214ENST00000514642 NOM1Q5C9Z4 860 aaKnown RBP8.65□□□□□ -1.02
CCDC30-214ENST00000514642 SSH1Q8WYL5 1049 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 TCP11L1Q9NUJ3 509 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 CALM1P0DP23 149 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 CALM2P0DP24 149 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 CALM3P0DP25 149 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 ZNF790Q6PG37 636 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 ZNF592Q92610 1267 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 MAP3K19Q56UN5 1328 aa8.65□□□□□ -1.02
CCDC30-214ENST00000514642 LTKP29376 864 aa8.65□□□□□ -1.03
CCDC30-214ENST00000514642 RAB3GAP1Q15042 981 aa8.65□□□□□ -1.03
CCDC30-214ENST00000514642 ZNF397Q8NF99 534 aaPredicted RBP8.65□□□□□ -1.03
CCDC30-214ENST00000514642 M0QZ92 97 aa8.65□□□□□ -1.03
CCDC30-214ENST00000514642 TBCAO75347 108 aaKnown RBP8.65□□□□□ -1.03
CCDC30-214ENST00000514642 SERPINC1P01008 464 aa8.65□□□□□ -1.03
CCDC30-214ENST00000514642 USP37Q86T82 979 aa8.65□□□□□ -1.03
CCDC30-214ENST00000514642 TBC1D22AQ8WUA7 517 aa8.65□□□□□ -1.03
CCDC30-214ENST00000514642 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.03
CCDC30-214ENST00000514642 A0A1W2PP64 1363 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms