RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
DDR1-275ENST00000514434 DDX60Q8IY21 1712 aaKnown RBP16.74■□□□□ 0.27
DDR1-275ENST00000514434 WDR90Q96KV7 1748 aa16.74■□□□□ 0.27
DDR1-275ENST00000514434 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
DDR1-275ENST00000514434 AOC3Q16853 763 aa16.74■□□□□ 0.27
DDR1-275ENST00000514434 MPNDQ8N594 471 aa16.74■□□□□ 0.27
DDR1-275ENST00000514434 CELF1Q92879 486 aaKnown RBP16.74■□□□□ 0.27
DDR1-275ENST00000514434 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
DDR1-275ENST00000514434 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
DDR1-275ENST00000514434 GJA3Q9Y6H8 435 aa16.74■□□□□ 0.27
DDR1-275ENST00000514434 FZD9O00144 591 aa16.73■□□□□ 0.27
DDR1-275ENST00000514434 PCCAP05165 728 aaPredicted RBP16.73■□□□□ 0.27
DDR1-275ENST00000514434 APLP1P51693 650 aa16.73■□□□□ 0.27
DDR1-275ENST00000514434 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
DDR1-275ENST00000514434 HTRA3P83110 453 aa16.73■□□□□ 0.27
DDR1-275ENST00000514434 NEXNQ0ZGT2 675 aa16.73■□□□□ 0.27
DDR1-275ENST00000514434 CWF19L2Q2TBE0 894 aaKnown RBP16.73■□□□□ 0.27
DDR1-275ENST00000514434 COL4A5P29400 1685 aa16.72■□□□□ 0.27
DDR1-275ENST00000514434 IGKV5-2P06315 115 aa16.72■□□□□ 0.27
DDR1-275ENST00000514434 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
DDR1-275ENST00000514434 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
DDR1-275ENST00000514434 FLIIQ13045 1269 aa16.72■□□□□ 0.27
DDR1-275ENST00000514434 FKBP5Q13451 457 aaPredicted RBP16.72■□□□□ 0.27
DDR1-275ENST00000514434 NIM1KQ8IY84 436 aa16.72■□□□□ 0.27
DDR1-275ENST00000514434 IQCA1LA6NCM1 817 aa16.71■□□□□ 0.27
DDR1-275ENST00000514434 HSP90B1P14625 803 aaKnown RBP16.71■□□□□ 0.27
DDR1-275ENST00000514434 SUPT20HQ8NEM7 779 aa16.71■□□□□ 0.27
DDR1-275ENST00000514434 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
DDR1-275ENST00000514434 CEP350Q5VT06 3117 aa16.71■□□□□ 0.27
DDR1-275ENST00000514434 PDE8AO60658 829 aa16.7■□□□□ 0.26
DDR1-275ENST00000514434 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
DDR1-275ENST00000514434 EAPPQ56P03 285 aaPredicted RBP16.7■□□□□ 0.26
DDR1-275ENST00000514434 L3MBTL3Q96JM7 780 aaPredicted RBP16.7■□□□□ 0.26
DDR1-275ENST00000514434 TAF1DQ9H5J8 278 aaPredicted RBP16.7■□□□□ 0.26
DDR1-275ENST00000514434 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
DDR1-275ENST00000514434 NSFL1CQ9UNZ2 370 aaKnown RBP16.7■□□□□ 0.26
DDR1-275ENST00000514434 COL4A1P02462 1669 aa16.69■□□□□ 0.26
DDR1-275ENST00000514434 NEURL1BA8MQ27 555 aa16.69■□□□□ 0.26
DDR1-275ENST00000514434 CCDC152Q4G0S7 254 aa16.69■□□□□ 0.26
DDR1-275ENST00000514434 TMC4Q7Z404 712 aa16.69■□□□□ 0.26
DDR1-275ENST00000514434 GPC2Q8N158 579 aa16.69■□□□□ 0.26
DDR1-275ENST00000514434 RTFDC1Q9BY42 306 aaPredicted RBP16.69■□□□□ 0.26
DDR1-275ENST00000514434 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
DDR1-275ENST00000514434 GPSM2P81274 684 aa16.68■□□□□ 0.26
DDR1-275ENST00000514434 CHADLQ6NUI6 762 aa16.68■□□□□ 0.26
DDR1-275ENST00000514434 UBE3BQ7Z3V4 1068 aa16.68■□□□□ 0.26
DDR1-275ENST00000514434 DNAAF4Q8WXU2 420 aa16.68■□□□□ 0.26
DDR1-275ENST00000514434 F6X3S4 739 aa16.67■□□□□ 0.26
DDR1-275ENST00000514434 C6orf229H3BNL8 230 aa16.67■□□□□ 0.26
DDR1-275ENST00000514434 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
DDR1-275ENST00000514434 EPHX2P34913 555 aa16.67■□□□□ 0.26
DDR1-275ENST00000514434 ZNRF3Q9ULT6 936 aa16.67■□□□□ 0.26
DDR1-275ENST00000514434 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
DDR1-275ENST00000514434 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
DDR1-275ENST00000514434 LMOD1P29536 600 aaPredicted RBP16.66■□□□□ 0.26
DDR1-275ENST00000514434 CTSWP56202 376 aa16.66■□□□□ 0.26
DDR1-275ENST00000514434 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
DDR1-275ENST00000514434 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
DDR1-275ENST00000514434 SCN4AP35499 1836 aa16.66■□□□□ 0.26
DDR1-275ENST00000514434 H7C1W4 665 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 RAD17O75943 681 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 CXCL9Q07325 125 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 GCKRQ14397 625 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 LDHDQ86WU2 507 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 VPS33BQ9H267 617 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 POLLQ9UGP5 575 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
DDR1-275ENST00000514434 EPS15P42566 896 aa16.64■□□□□ 0.25
DDR1-275ENST00000514434 ANKRD18AQ8IVF6 992 aa16.64■□□□□ 0.25
DDR1-275ENST00000514434 LINS1Q8NG48 757 aa16.64■□□□□ 0.25
DDR1-275ENST00000514434 TTLL11Q8NHH1 800 aa16.64■□□□□ 0.25
DDR1-275ENST00000514434 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 SCNN1DP51172 638 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 DOK7Q18PE1 504 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 DNAJC5GQ8N7S2 189 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 GREM2Q9H772 168 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 DBNDD1Q9H9R9 158 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 DUOX1Q9NRD9 1551 aa16.63■□□□□ 0.25
DDR1-275ENST00000514434 LRRC37AA6NMS7 1700 aa16.62■□□□□ 0.25
DDR1-275ENST00000514434 E9PSI1 815 aa16.62■□□□□ 0.25
DDR1-275ENST00000514434 UFL1O94874 794 aa16.62■□□□□ 0.25
DDR1-275ENST00000514434 CIAPIN1Q6FI81 312 aa16.62■□□□□ 0.25
DDR1-275ENST00000514434 SLC4A10Q6U841 1118 aa16.62■□□□□ 0.25
DDR1-275ENST00000514434 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
DDR1-275ENST00000514434 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
DDR1-275ENST00000514434 CDC5LQ99459 802 aaKnown RBP16.62■□□□□ 0.25
DDR1-275ENST00000514434 YDJCA8MPS7 323 aa16.61■□□□□ 0.25
DDR1-275ENST00000514434 GMPSP49915 693 aaPredicted RBP16.61■□□□□ 0.25
DDR1-275ENST00000514434 MAP1SQ66K74 1059 aaPredicted RBP16.61■□□□□ 0.25
DDR1-275ENST00000514434 EYA3Q99504 573 aa16.61■□□□□ 0.25
DDR1-275ENST00000514434 BCL2L13Q9BXK5 485 aa16.61■□□□□ 0.25
DDR1-275ENST00000514434 ZC3H12CQ9C0D7 883 aaKnown RBP16.61■□□□□ 0.25
DDR1-275ENST00000514434 GGA1Q9UJY5 639 aa16.61■□□□□ 0.25
DDR1-275ENST00000514434 LTBP1Q14766 1721 aa16.6■□□□□ 0.25
DDR1-275ENST00000514434 G3V3G9 751 aa16.6■□□□□ 0.25
DDR1-275ENST00000514434 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
DDR1-275ENST00000514434 TNIP1Q15025 636 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms