RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	COX20	Q5RI15	118 aa		6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	DNAJB12	Q9NXW2	375 aa	Known RBP	6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	UST	Q9Y2C2	406 aa		6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RTCB	Q9Y3I0	505 aa	Known RBP	6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	CCDC9	Q9Y3X0	531 aa	Known RBP	6.06	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	APBA3	O96018	575 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	PSAP	P07602	524 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RARA	P10276	462 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RANGAP1	P46060	587 aa	Predicted RBP	6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	GPLD1	P80108	840 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	TBC1D8B	Q0IIM8	1120 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	DHX32	Q7L7V1	743 aa	Known RBP	6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	MICALL1	Q8N3F8	863 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	DTWD1	Q8N5C7	304 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	TRPM4	Q8TD43	1214 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	TTC9	Q92623	222 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	PLVAP	Q9BX97	442 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	STIM2	Q9P246	746 aa		6.05	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	XYLB	O75191	536 aa		6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RGS9	O75916	674 aa	Predicted RBP	6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	PLAUR	Q03405	335 aa		6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	TRIM28	Q13263	835 aa	Known RBP	6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	TTC16	Q8NEE8	873 aa		6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	SRA1	Q9HD15	236 aa	Known RBP	6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	LRFN2	Q9ULH4	789 aa		6.04	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	LGR5	O75473	907 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	ALB	P02768	609 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	COL8A1	P27658	744 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	ALKBH2	Q6NS38	261 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	C20orf204	Q6ZNR8	217 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	NLRP13	Q86W25	1043 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	RGL4	Q8IZJ4	473 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	HELQ	Q8TDG4	1101 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	SPOCK3	Q9BQ16	436 aa		6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	JPH1	Q9HDC5	661 aa	Predicted RBP	6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	TLR7	Q9NYK1	1049 aa	Known RBP	6.03	□□□□□ -1.44
CALCOCO2-223	ENST00000514267	KRBA1	A5PL33	1030 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	OPLAH	O14841	1288 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	ELN	P15502	786 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	ELMSAN1	Q6PJG2	1045 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	FAM35A	Q86V20	835 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	CMTR1	Q8N1G2	835 aa	Known RBP	6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	TRIM11	Q96F44	468 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	MKNK1	Q9BUB5	465 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	IGFLR1	Q9H665	355 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	STARD13	Q9Y3M8	1113 aa		6.02	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	C9orf172	C9J069	976 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	NID1	P14543	1247 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	ZAP70	P43403	619 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	NRG1	Q02297	640 aa	Predicted RBP	6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	PDE12	Q6L8Q7	609 aa	Known RBP	6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	PSAPL1	Q6NUJ1	521 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	MAP4K3	Q8IVH8	894 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	ETFBKMT	Q8IXQ9	262 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	RETREG2	Q8NC44	543 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	MUC3B	Q9H195	1237 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	SUV39H2	Q9H5I1	410 aa		6.01	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	PATL2	C9JE40	543 aa	Known RBP	6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	UBAP1L	F5GYI3	381 aa		6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	TNFRSF10B	O14763	440 aa		6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	GHRH	P01286	108 aa		6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	USP5	P45974	858 aa		6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	SF3B2	Q13435	895 aa	Known RBP	6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	TRAPPC3L	Q5T215	181 aa		6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	TTC39B	Q5VTQ0	682 aa	Predicted RBP	6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	SPACA7	Q96KW9	195 aa		6	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	FAM177B	A6PVY3	158 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	SASH3	O75995	380 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	SSFA2	P28290	1259 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	GRN	P28799	593 aa	Known RBP	5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	EHHADH	Q08426	723 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	HYAL2	Q12891	473 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	KRT25	Q7Z3Z0	450 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	WFDC8	Q8IUA0	241 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	PMEPA1	Q969W9	287 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	ZFAT	Q9P243	1243 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	KCNMB2	Q9Y691	235 aa		5.99	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	TMEM88B	A6NKF7	163 aa		5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	FAM13A	O94988	1023 aa		5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	PROC	P04070	461 aa		5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	CPB1	P15086	417 aa		5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	EIF2AK2	P19525	551 aa	Known RBP	5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	TARS	P26639	723 aa	Known RBP	5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	AFF1	P51825	1210 aa	Known RBP	5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	NAA30	Q147X3	362 aa	Predicted RBP	5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	NOM1	Q5C9Z4	860 aa	Known RBP	5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	MSL1	Q68DK7	614 aa		5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	NPM2	Q86SE8	214 aa	Known RBP	5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	OR13H1	Q8NG92	308 aa		5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	SAP130	Q9H0E3	1048 aa		5.98	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	C1QTNF9B	B2RNN3	333 aa		5.97	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	GATA4	P43694	442 aa		5.97	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	COL9A3	Q14050	684 aa	Predicted RBP	5.97	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	CD163	Q86VB7	1156 aa		5.97	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	ABI2	Q9NYB9	513 aa	Predicted RBP	5.97	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	EGFL7	Q9UHF1	273 aa		5.97	□□□□□ -1.45
CALCOCO2-223	ENST00000514267	NAGPA	Q9UK23	515 aa		5.97	□□□□□ -1.45
CALCOCO2-223	ENST00000514267		A0A0A0MRY4	1105 aa		5.96	□□□□□ -1.46
CALCOCO2-223	ENST00000514267	LOC102724428	A0A0B4J2F2	783 aa		5.96	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms