RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 KSR2Q6VAB6 950 aa11.23□□□□□ -0.61
HERC4-214ENST00000513996 PI4KAP1Q8N8J0 262 aa11.23□□□□□ -0.61
HERC4-214ENST00000513996 PSMD1Q99460 953 aa11.23□□□□□ -0.61
HERC4-214ENST00000513996 ATP6V0A2Q9Y487 856 aa11.23□□□□□ -0.61
HERC4-214ENST00000513996 BBOX1O75936 387 aa11.22□□□□□ -0.61
HERC4-214ENST00000513996 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
HERC4-214ENST00000513996 IARSP41252 1262 aaKnown RBP11.22□□□□□ -0.61
HERC4-214ENST00000513996 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
HERC4-214ENST00000513996 ZBTB38Q8NAP3 1195 aaPredicted RBP11.22□□□□□ -0.61
HERC4-214ENST00000513996 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
HERC4-214ENST00000513996 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
HERC4-214ENST00000513996 CELF1Q92879 486 aaKnown RBP11.22□□□□□ -0.61
HERC4-214ENST00000513996 STK31Q9BXU1 1019 aa11.22□□□□□ -0.61
HERC4-214ENST00000513996 CHMP4AQ9BY43 222 aa11.22□□□□□ -0.61
HERC4-214ENST00000513996 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.61
HERC4-214ENST00000513996 ZNF541Q9H0D2 1346 aa11.21□□□□□ -0.61
HERC4-214ENST00000513996 FZD9O00144 591 aa11.21□□□□□ -0.61
HERC4-214ENST00000513996 DDX58O95786 925 aaKnown RBP11.21□□□□□ -0.61
HERC4-214ENST00000513996 PCCAP05165 728 aaPredicted RBP11.21□□□□□ -0.61
HERC4-214ENST00000513996 HSPA6P17066 643 aa11.21□□□□□ -0.61
HERC4-214ENST00000513996 GRAPQ13588 217 aa11.21□□□□□ -0.61
HERC4-214ENST00000513996 POTEHQ6S545 545 aa11.21□□□□□ -0.61
HERC4-214ENST00000513996 CHRDL2Q6WN34 429 aa11.21□□□□□ -0.61
HERC4-214ENST00000513996 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
HERC4-214ENST00000513996 SP8Q8IXZ3 490 aa11.21□□□□□ -0.61
HERC4-214ENST00000513996 GRAPLQ8TC17 118 aaPredicted RBP11.21□□□□□ -0.61
HERC4-214ENST00000513996 CWC25Q9NXE8 425 aaPredicted RBP11.21□□□□□ -0.61
HERC4-214ENST00000513996 TAF1P21675 1872 aa11.21□□□□□ -0.62
HERC4-214ENST00000513996 COL4A5P29400 1685 aa11.2□□□□□ -0.62
HERC4-214ENST00000513996 FLIIQ13045 1269 aa11.2□□□□□ -0.62
HERC4-214ENST00000513996 CWF19L2Q2TBE0 894 aaKnown RBP11.2□□□□□ -0.62
HERC4-214ENST00000513996 SEC31BQ9NQW1 1179 aa11.2□□□□□ -0.62
HERC4-214ENST00000513996 LAMB2P55268 1798 aa11.2□□□□□ -0.62
HERC4-214ENST00000513996 COL4A1P02462 1669 aa11.2□□□□□ -0.62
HERC4-214ENST00000513996 TIAM2Q8IVF5 1701 aa11.19□□□□□ -0.62
HERC4-214ENST00000513996 NEURL1BA8MQ27 555 aa11.19□□□□□ -0.62
HERC4-214ENST00000513996 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
HERC4-214ENST00000513996 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
HERC4-214ENST00000513996 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
HERC4-214ENST00000513996 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
HERC4-214ENST00000513996 DDX60Q8IY21 1712 aaKnown RBP11.18□□□□□ -0.62
HERC4-214ENST00000513996 F6X3S4 739 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 H7C1W4 665 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 PDE8AO60658 829 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 POTEIP0CG38 1075 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
HERC4-214ENST00000513996 FKBP5Q13451 457 aaPredicted RBP11.18□□□□□ -0.62
HERC4-214ENST00000513996 AOC3Q16853 763 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 LARGE2Q8N3Y3 721 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 MPNDQ8N594 471 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
HERC4-214ENST00000513996 CCDC85AQ96PX6 553 aaPredicted RBP11.18□□□□□ -0.62
HERC4-214ENST00000513996 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
HERC4-214ENST00000513996 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
HERC4-214ENST00000513996 CASP7P55210 303 aa11.17□□□□□ -0.62
HERC4-214ENST00000513996 SLFN5Q08AF3 891 aa11.17□□□□□ -0.62
HERC4-214ENST00000513996 FSTL1Q12841 308 aa11.17□□□□□ -0.62
HERC4-214ENST00000513996 DPP8Q6V1X1 898 aaPredicted RBP11.17□□□□□ -0.62
HERC4-214ENST00000513996 DNAAF4Q8WXU2 420 aa11.17□□□□□ -0.62
HERC4-214ENST00000513996 JDP2Q8WYK2 163 aa11.17□□□□□ -0.62
HERC4-214ENST00000513996 TAF1DQ9H5J8 278 aaPredicted RBP11.17□□□□□ -0.62
HERC4-214ENST00000513996 CDHR2Q9BYE9 1310 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 GPSM2P81274 684 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 HTRA3P83110 453 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 NEXNQ0ZGT2 675 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 GCKRQ14397 625 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 SMC1BQ8NDV3 1235 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 TTLL11Q8NHH1 800 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 TMX4Q9H1E5 349 aaPredicted RBP11.16□□□□□ -0.62
HERC4-214ENST00000513996 POLLQ9UGP5 575 aa11.16□□□□□ -0.62
HERC4-214ENST00000513996 CTSWP56202 376 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 EIF6P56537 245 aaKnown RBP11.15□□□□□ -0.62
HERC4-214ENST00000513996 CXCL9Q07325 125 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 CCDC152Q4G0S7 254 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 BEND3Q5T5X7 828 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 UBE3BQ7Z3V4 1068 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 NIM1KQ8IY84 436 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 TRMT2AQ8IZ69 625 aaKnown RBP11.15□□□□□ -0.62
HERC4-214ENST00000513996 MIER1Q8N108 512 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 GPC2Q8N158 579 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 LINS1Q8NG48 757 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
HERC4-214ENST00000513996 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 NSFL1CQ9UNZ2 370 aaKnown RBP11.15□□□□□ -0.62
HERC4-214ENST00000513996 GJA3Q9Y6H8 435 aa11.15□□□□□ -0.62
HERC4-214ENST00000513996 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
HERC4-214ENST00000513996 YDJCA8MPS7 323 aa11.14□□□□□ -0.63
HERC4-214ENST00000513996 E9PSI1 815 aa11.14□□□□□ -0.63
HERC4-214ENST00000513996 HSP90B1P14625 803 aaKnown RBP11.14□□□□□ -0.63
HERC4-214ENST00000513996 APLP1P51693 650 aa11.14□□□□□ -0.63
HERC4-214ENST00000513996 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
HERC4-214ENST00000513996 GREM2Q9H772 168 aa11.14□□□□□ -0.63
HERC4-214ENST00000513996 CEP350Q5VT06 3117 aa11.13□□□□□ -0.63
HERC4-214ENST00000513996 DUOX1Q9NRD9 1551 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms