RNA–Protein interactions for RNA: ENST00000513800.5

DCUN1D4-222, Transcript of defective in cullin neddylation 1 domain containing 4, human

TSL 2

Gene DCUN1D4, Length 949 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCUN1D4-222	ENST00000513800	DDX60	Q8IY21	1712 aa	Known RBP	32.2	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	LARGE2	Q8N3Y3	721 aa		32.19	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	FZD9	O00144	591 aa		32.18	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	VAMP4	O75379	141 aa		32.18	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	APLP1	P51693	650 aa		32.18	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	DPP8	Q6V1X1	898 aa	Predicted RBP	32.18	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	EIF6	P56537	245 aa	Known RBP	32.17	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	FLII	Q13045	1269 aa		32.17	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	MPND	Q8N594	471 aa		32.17	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.17	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	CEP350	Q5VT06	3117 aa		32.15	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	FKBP5	Q13451	457 aa	Predicted RBP	32.15	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	NIM1K	Q8IY84	436 aa		32.15	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.15	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	CACNA1F	O60840	1977 aa		32.14	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	POTEC	B2RU33	542 aa		32.14	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	PPIP5K2	O43314	1243 aa		32.14	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	PDE8A	O60658	829 aa		32.14	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	CCDC152	Q4G0S7	254 aa		32.14	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.14	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	ZNF541	Q9H0D2	1346 aa		32.14	■■■□□ 2.74
DCUN1D4-222	ENST00000513800	CCER2	I3L3R5	266 aa		32.13	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	G2E3	Q7L622	706 aa		32.13	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	GPC2	Q8N158	579 aa		32.13	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	CDHR2	Q9BYE9	1310 aa		32.12	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	ZNF521	Q96K83	1311 aa		32.11	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	IGKV5-2	P06315	115 aa		32.11	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	DNAAF4	Q8WXU2	420 aa		32.1	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	CELF1	Q92879	486 aa	Known RBP	32.1	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	NEURL1B	A8MQ27	555 aa		32.09	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	RPS8	P62241	208 aa	Known RBP	32.09	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	AOC3	Q16853	763 aa		32.09	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	SLC51A	Q86UW1	340 aa		32.09	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	HACL1	Q9UJ83	578 aa		32.09	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	SCN4A	P35499	1836 aa		32.09	■■■□□ 2.73
DCUN1D4-222	ENST00000513800	CWF19L2	Q2TBE0	894 aa	Known RBP	32.07	■■■□□ 2.72
DCUN1D4-222	ENST00000513800		E9PSI1	815 aa		32.06	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	KIAA2012	Q0VF49	1180 aa		32.06	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.06	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	LRRC37A	A6NMS7	1700 aa		32.06	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	LINS1	Q8NG48	757 aa		32.05	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	ZNRF3	Q9ULT6	936 aa		32.05	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.05	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	GJA3	Q9Y6H8	435 aa		32.05	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	LMOD1	P29536	600 aa	Predicted RBP	32.04	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	CTSW	P56202	376 aa		32.04	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	CHADL	Q6NUI6	762 aa		32.04	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	JARID2	Q92833	1246 aa	Predicted RBP	32.04	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	TAF1	P21675	1872 aa		32.03	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	COL4A5	P29400	1685 aa		32.03	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	PNMA8A	Q86V59	439 aa	Predicted RBP	32.03	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	LDHD	Q86WU2	507 aa		32.03	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	GCKR	Q14397	625 aa		32.02	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	CDC5L	Q99459	802 aa	Known RBP	32.02	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	EYA3	Q99504	573 aa		32.02	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	SEC31B	Q9NQW1	1179 aa		32.02	■■■□□ 2.72
DCUN1D4-222	ENST00000513800	EPHX2	P34913	555 aa		32.01	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	UBE3B	Q7Z3V4	1068 aa		32.01	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	ANKRD18A	Q8IVF6	992 aa		32.01	■■■□□ 2.71
DCUN1D4-222	ENST00000513800		H7C1W4	665 aa		32	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	WASHC4	Q2M389	1173 aa		32	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	C6orf229	H3BNL8	230 aa		31.99	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	EAPP	Q56P03	285 aa	Predicted RBP	31.99	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.99	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	GPSM2	P81274	684 aa		31.98	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	ANKIB1	Q9P2G1	1089 aa		31.98	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	RTL9	Q8NET4	1388 aa		31.97	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	TNIP1	Q15025	636 aa		31.97	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	TTLL11	Q8NHH1	800 aa		31.97	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	PODXL2	Q9NZ53	605 aa		31.97	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	DUOX1	Q9NRD9	1551 aa		31.97	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	CIAPIN1	Q6FI81	312 aa		31.96	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	PLA2G12B	Q9BX93	195 aa		31.96	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	CLEC11A	Q9Y240	323 aa		31.95	■■■□□ 2.71
DCUN1D4-222	ENST00000513800	MYH3	P11055	1940 aa		31.94	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	POTEI	P0CG38	1075 aa		31.94	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	POTEJ	P0CG39	1038 aa		31.94	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	CXCL9	Q07325	125 aa		31.94	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	SLFN5	Q08AF3	891 aa		31.94	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	POLL	Q9UGP5	575 aa		31.94	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	GGA1	Q9UJY5	639 aa		31.94	■■■□□ 2.7
DCUN1D4-222	ENST00000513800		F6X3S4	739 aa		31.93	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	BEND3	Q5T5X7	828 aa		31.93	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	TBC1D16	Q8TBP0	767 aa		31.93	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	SCNN1D	P51172	638 aa		31.92	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	ZC3H12C	Q9C0D7	883 aa	Known RBP	31.92	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	GREM2	Q9H772	168 aa		31.92	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	XDH	P47989	1333 aa		31.92	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	UFL1	O94874	794 aa		31.91	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	BSDC1	Q9NW68	430 aa	Predicted RBP	31.91	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	COL4A1	P02462	1669 aa		31.91	■■■□□ 2.7
DCUN1D4-222	ENST00000513800		G3V3G9	751 aa		31.9	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	RIMBP2	O15034	1052 aa		31.9	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	RAD17	O75943	681 aa		31.9	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	IGHMBP2	P38935	993 aa	Known RBP	31.9	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	DCAF8	Q5TAQ9	597 aa		31.9	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	USP50	Q70EL3	339 aa	Predicted RBP	31.9	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	BCL2L13	Q9BXK5	485 aa		31.9	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	CASP7	P55210	303 aa		31.89	■■■□□ 2.7
DCUN1D4-222	ENST00000513800	GPRC5D	Q9NZD1	345 aa		31.89	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms