RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 CCDC57Q2TAC2 916 aa15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 CAMTA2O94983 1202 aa15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 CHGBP05060 677 aa15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 ANAPC15P60006 121 aa15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 NMIQ13287 307 aaPredicted RBP15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 GPR108Q9NPR9 543 aa15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 TRMT112Q9UI30 125 aaKnown RBP15.94■□□□□ 0.14
SNCAIP-218ENST00000513719 ANKRD36CQ5JPF3 1778 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 RREB1Q92766 1687 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 GREM2Q9H772 168 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 IRS4O14654 1257 aaPredicted RBP15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 MCCP23508 829 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 NEK4P51957 841 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 SUSD4Q5VX71 490 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 LINC00116Q8NCU8 138 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 SMARCC1Q92922 1105 aaPredicted RBP15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 NEUROD6Q96NK8 337 aa15.93■□□□□ 0.14
SNCAIP-218ENST00000513719 CICQ96RK0 1608 aaPredicted RBP15.92■□□□□ 0.14
SNCAIP-218ENST00000513719 A0A0D9SFI3 127 aa15.92■□□□□ 0.14
SNCAIP-218ENST00000513719 ST18O60284 1047 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 CTSWP56202 376 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 HAUS7Q99871 368 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 SNX14Q9Y5W7 946 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 ZNF609O15014 1411 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 A0A1B0GUL7 405 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 IFIT5Q13325 482 aaKnown RBP15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 SMIM5Q71RC9 77 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 SNRKQ9NRH2 765 aa15.91■□□□□ 0.14
SNCAIP-218ENST00000513719 ITGA6P23229 1130 aa15.9■□□□□ 0.14
SNCAIP-218ENST00000513719 RUFY2Q8WXA3 655 aa15.9■□□□□ 0.14
SNCAIP-218ENST00000513719 UPF3BQ9BZI7 483 aaKnown RBP15.9■□□□□ 0.14
SNCAIP-218ENST00000513719 THSD7AQ9UPZ6 1657 aa15.9■□□□□ 0.14
SNCAIP-218ENST00000513719 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
SNCAIP-218ENST00000513719 RIPOR2Q9Y4F9 1068 aa15.9■□□□□ 0.14
SNCAIP-218ENST00000513719 COL5A3P25940 1745 aaPredicted RBP15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 ADORA1P30542 326 aa15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 KIAA1211Q6ZU35 1233 aa15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 ZNF589Q86UQ0 364 aaPredicted RBP15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 GJD4Q96KN9 370 aaPredicted RBP15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 CEP126Q9P2H0 1117 aa15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 PDE8AO60658 829 aa15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 HSP90AA1P07900 732 aaKnown RBP15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 FBXO3Q9UK99 471 aa15.89■□□□□ 0.13
SNCAIP-218ENST00000513719 HIP1O00291 1037 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 ZGPATQ8N5A5 531 aaKnown RBP15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 MED23Q9ULK4 1368 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 CCDC171Q6TFL3 1326 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 RIC1Q4ADV7 1423 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 NECTIN1Q15223 517 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 SLFNL1Q499Z3 407 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 MAP4K1Q92918 833 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 KCNB2Q92953 911 aa15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 CIZ1Q9ULV3 898 aaPredicted RBP15.88■□□□□ 0.13
SNCAIP-218ENST00000513719 AFF2P51816 1311 aa15.87■□□□□ 0.13
SNCAIP-218ENST00000513719 TMX3Q96JJ7 454 aa15.87■□□□□ 0.13
SNCAIP-218ENST00000513719 RAB3GAP1Q15042 981 aa15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 ADCK5Q3MIX3 580 aa15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 TAF7LQ5H9L4 462 aa15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 MEX3CQ5U5Q3 659 aaKnown RBP15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 LDHAL6AQ6ZMR3 332 aa15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 XAGE2Q96GT9 111 aa15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 SEC62Q99442 399 aaKnown RBP15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 ANKRD18BA2A2Z9 1011 aa15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 COL9A3Q14050 684 aaPredicted RBP15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 PRPF40BQ6NWY9 871 aaKnown RBP15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 TNPO1Q92973 898 aaKnown RBP15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 ZNF831Q5JPB2 1677 aa15.86■□□□□ 0.13
SNCAIP-218ENST00000513719 GOLIM4O00461 696 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 NTSR2O95665 410 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 CPA1P15085 419 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 VGLL2Q8N8G2 317 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 KBTBD3Q8NAB2 608 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 TTC14Q96N46 770 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 NIP7Q9Y221 180 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 RBM8AQ9Y5S9 174 aaKnown RBP15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 ONECUT3O60422 494 aaPredicted RBP15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 MCM4P33991 863 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 NOL8Q76FK4 1167 aaKnown RBP15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 PAG1Q9NWQ8 432 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 TAF6LQ9Y6J9 622 aa15.85■□□□□ 0.13
SNCAIP-218ENST00000513719 MYH3P11055 1940 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 TAF5LO75529 589 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 SCARF1Q14162 830 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 CCDC129Q6ZRS4 1044 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 AMIGO3Q86WK7 504 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 IFIT1P09914 478 aaKnown RBP15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 PKP1Q13835 747 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 SEC31BQ9NQW1 1179 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 AKAP2Q9Y2D5 859 aa15.84■□□□□ 0.13
SNCAIP-218ENST00000513719 BTAF1O14981 1849 aa15.83■□□□□ 0.13
SNCAIP-218ENST00000513719 SSFA2P28290 1259 aa15.83■□□□□ 0.12
SNCAIP-218ENST00000513719 CUL4AQ13619 759 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms