RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
CDK7-210ENST00000513629 NUDCQ9Y266 331 aa12.39□□□□□ -0.43
CDK7-210ENST00000513629 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 TRIM6-TRIM34B2RNG4 842 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 KCNQ3O43525 872 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 RASSF7Q02833 373 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 AMHR2Q16671 573 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 TEX13AQ9BXU3 409 aaPredicted RBP12.38□□□□□ -0.43
CDK7-210ENST00000513629 TBC1D2BQ9UPU7 963 aa12.38□□□□□ -0.43
CDK7-210ENST00000513629 TOMM70O94826 608 aa12.37□□□□□ -0.43
CDK7-210ENST00000513629 A1BGP04217 495 aa12.37□□□□□ -0.43
CDK7-210ENST00000513629 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
CDK7-210ENST00000513629 DMRTA1Q5VZB9 504 aa12.37□□□□□ -0.43
CDK7-210ENST00000513629 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
CDK7-210ENST00000513629 MCM10Q7L590 875 aa12.36□□□□□ -0.43
CDK7-210ENST00000513629 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
CDK7-210ENST00000513629 RTF1Q92541 710 aaKnown RBP12.36□□□□□ -0.43
CDK7-210ENST00000513629 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
CDK7-210ENST00000513629 KDM2BQ8NHM5 1336 aa12.36□□□□□ -0.43
CDK7-210ENST00000513629 COL11A2P13942 1736 aaPredicted RBP12.35□□□□□ -0.43
CDK7-210ENST00000513629 PRAMEF22A3QJZ6 481 aa12.35□□□□□ -0.43
CDK7-210ENST00000513629 H0YIN7 160 aa12.35□□□□□ -0.43
CDK7-210ENST00000513629 OATP04181 439 aa12.35□□□□□ -0.43
CDK7-210ENST00000513629 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
CDK7-210ENST00000513629 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
CDK7-210ENST00000513629 C16orf71Q8IYS4 520 aaPredicted RBP12.35□□□□□ -0.43
CDK7-210ENST00000513629 CCDC24Q8N4L8 307 aa12.35□□□□□ -0.43
CDK7-210ENST00000513629 TTLL6Q8N841 843 aa12.35□□□□□ -0.43
CDK7-210ENST00000513629 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
CDK7-210ENST00000513629 SBF1O95248 1867 aa12.34□□□□□ -0.43
CDK7-210ENST00000513629 ANKRD31Q8N7Z5 1873 aa12.34□□□□□ -0.43
CDK7-210ENST00000513629 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
CDK7-210ENST00000513629 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
CDK7-210ENST00000513629 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
CDK7-210ENST00000513629 PRR5LQ6MZQ0 368 aa12.34□□□□□ -0.43
CDK7-210ENST00000513629 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
CDK7-210ENST00000513629 TNRC6CQ9HCJ0 1690 aaKnown RBP12.33□□□□□ -0.44
CDK7-210ENST00000513629 NPHP1O15259 732 aa12.33□□□□□ -0.44
CDK7-210ENST00000513629 LMNB1P20700 586 aa12.33□□□□□ -0.44
CDK7-210ENST00000513629 APLP1P51693 650 aa12.33□□□□□ -0.44
CDK7-210ENST00000513629 PRELPP51888 382 aa12.33□□□□□ -0.44
CDK7-210ENST00000513629 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
CDK7-210ENST00000513629 CNBD1Q8NA66 436 aa12.33□□□□□ -0.44
CDK7-210ENST00000513629 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
CDK7-210ENST00000513629 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDK7-210ENST00000513629 USP16Q9Y5T5 823 aa12.33□□□□□ -0.44
CDK7-210ENST00000513629 ZC3H4Q9UPT8 1303 aaKnown RBP12.33□□□□□ -0.44
CDK7-210ENST00000513629 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 NFKBIEO00221 500 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 SNRPA1P09661 255 aaKnown RBP12.32□□□□□ -0.44
CDK7-210ENST00000513629 PDE6BP35913 854 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 PACS2Q86VP3 889 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 SETDB2Q96T68 719 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 SLC4A5Q9BY07 1137 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
CDK7-210ENST00000513629 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
CDK7-210ENST00000513629 ST5P78524 1137 aa12.31□□□□□ -0.44
CDK7-210ENST00000513629 NUDT18Q6ZVK8 323 aa12.31□□□□□ -0.44
CDK7-210ENST00000513629 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
CDK7-210ENST00000513629 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
CDK7-210ENST00000513629 C21orf2O43822 256 aa12.3□□□□□ -0.44
CDK7-210ENST00000513629 TATDN2Q93075 761 aa12.3□□□□□ -0.44
CDK7-210ENST00000513629 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
CDK7-210ENST00000513629 KIAA1468Q9P260 1216 aa12.3□□□□□ -0.44
CDK7-210ENST00000513629 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
CDK7-210ENST00000513629 WDR90Q96KV7 1748 aa12.29□□□□□ -0.44
CDK7-210ENST00000513629 FSTL1Q12841 308 aa12.29□□□□□ -0.44
CDK7-210ENST00000513629 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
CDK7-210ENST00000513629 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
CDK7-210ENST00000513629 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
CDK7-210ENST00000513629 MIS18AQ9NYP9 233 aa12.29□□□□□ -0.44
CDK7-210ENST00000513629 ZNF652Q9Y2D9 606 aa12.29□□□□□ -0.44
CDK7-210ENST00000513629 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 PCNTO95613 3336 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 GLTPD2A6NH11 291 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 NEFMP07197 916 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 HTRA3P83110 453 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
CDK7-210ENST00000513629 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
CDK7-210ENST00000513629 NBPF5PQ86XG9 351 aaPredicted RBP12.28□□□□□ -0.44
CDK7-210ENST00000513629 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 REPIN1Q9BWE0 567 aaKnown RBP12.28□□□□□ -0.44
CDK7-210ENST00000513629 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 VPS9D1Q9Y2B5 631 aa12.28□□□□□ -0.44
CDK7-210ENST00000513629 SMAPO00193 183 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 SRGNP10124 158 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 MDM2Q00987 491 aaPredicted RBP12.27□□□□□ -0.45
CDK7-210ENST00000513629 STYK1Q6J9G0 422 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 CLEC4GQ6UXB4 293 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 DNAJC5GQ8N7S2 189 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 SMC1BQ8NDV3 1235 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 CNKSR1Q969H4 720 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.45
CDK7-210ENST00000513629 NIP7Q9Y221 180 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDK7-210ENST00000513629 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms