RNA–Protein interactions for RNA: ENST00000513338.1

NCOA4P4-201, Transcript of nuclear receptor coactivator 4 pseudogene 4, humanhuman

BASIC

Gene NCOA4P4, Length 1,861 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4P4-201ENST00000513338 FOXO4P98177 505 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 CSPP1Q1MSJ5 1256 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 LRSAM1Q6UWE0 723 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 CHAMP1Q96JM3 812 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 HAUS7Q99871 368 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 DBNDD2Q9BQY9 259 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 GPR108Q9NPR9 543 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 SHANK3Q9BYB0 1731 aa11.24□□□□□ -0.61
NCOA4P4-201ENST00000513338 A1BGP04217 495 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 SYT1P21579 422 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 GJB2P29033 226 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 TICAM2Q86XR7 235 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 TMEM87AQ8NBN3 555 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 TEX13AQ9BXU3 409 aaPredicted RBP11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 RRAGDQ9NQL2 400 aaPredicted RBP11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 TMEM63CQ9P1W3 806 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 TJP1Q07157 1748 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 SYCE3A1L190 88 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 LARGE1O95461 756 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 F13A1P00488 732 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 TSGA10IPQ3SY00 556 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 ZNF589Q86UQ0 364 aaPredicted RBP11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 ALDH8A1Q9H2A2 487 aaPredicted RBP11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 ATG3Q9NT62 314 aa11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 U3KPZ7 1027 aaPredicted RBP11.23□□□□□ -0.61
NCOA4P4-201ENST00000513338 NHSL1Q5SYE7 1610 aa11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 TAF5LO75529 589 aa11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 RPS6KB1P23443 525 aa11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 FOXD4L6Q3SYB3 417 aaPredicted RBP11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 FOXD4L3Q6VB84 417 aaPredicted RBP11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 KIF6Q6ZMV9 814 aa11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 EDC3Q96F86 508 aaKnown RBP11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 NEUROD6Q96NK8 337 aa11.22□□□□□ -0.61
NCOA4P4-201ENST00000513338 EYA2O00167 538 aa11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 CIAO1O76071 339 aa11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 PDCP20941 246 aa11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 ME3Q16798 604 aa11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 USPL1Q5W0Q7 1092 aa11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 KBTBD3Q8NAB2 608 aa11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 PALLDQ8WX93 1383 aa11.21□□□□□ -0.61
NCOA4P4-201ENST00000513338 SH3TC1Q8TE82 1336 aa11.21□□□□□ -0.62
NCOA4P4-201ENST00000513338 ZNF609O15014 1411 aa11.21□□□□□ -0.62
NCOA4P4-201ENST00000513338 ATG9AQ7Z3C6 839 aa11.21□□□□□ -0.62
NCOA4P4-201ENST00000513338 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.62
NCOA4P4-201ENST00000513338 RBSNQ9H1K0 784 aa11.21□□□□□ -0.62
NCOA4P4-201ENST00000513338 TPCN1Q9ULQ1 816 aa11.21□□□□□ -0.62
NCOA4P4-201ENST00000513338 TOGARAM1Q9Y4F4 1720 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 ESPNB1AK53 854 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 STARD3NLO95772 234 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 CLCN1P35523 988 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 TCIRG1Q13488 830 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 DDX46Q7L014 1031 aaKnown RBP11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 ISCA1Q9BUE6 129 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 GDPD2Q9HCC8 539 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 HELLSQ9NRZ9 838 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 PAG1Q9NWQ8 432 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 FBXO3Q9UK99 471 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 CNPY2Q9Y2B0 182 aa11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
NCOA4P4-201ENST00000513338 VPS37CA5D8V6 355 aaPredicted RBP11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 LETM1O95202 739 aaPredicted RBP11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 UBE2HP62256 183 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 CCDC57Q2TAC2 916 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 TSPY26PQ9H489 355 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 MTMR6Q9Y217 621 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 GOLIM4O00461 696 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 CCDC183Q5T5S1 534 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 LARP1BQ659C4 914 aaKnown RBP11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 CEP126Q9P2H0 1117 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 AKAP2Q9Y2D5 859 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 CCDC9Q9Y3X0 531 aaKnown RBP11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 NDUFB9Q9Y6M9 179 aa11.19□□□□□ -0.62
NCOA4P4-201ENST00000513338 SPEF2Q9C093 1822 aa11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 FIBPO43427 364 aa11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 GADD45BO75293 160 aaPredicted RBP11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 HMGB1P09429 215 aaKnown RBP11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 IFIT1P09914 478 aaKnown RBP11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 ST3GAL1Q11201 340 aa11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 TRIM28Q13263 835 aaKnown RBP11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 MAPK8IP2Q13387 824 aaPredicted RBP11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 TAF7LQ5H9L4 462 aa11.18□□□□□ -0.62
NCOA4P4-201ENST00000513338 TIMM10P62072 90 aa11.17□□□□□ -0.62
NCOA4P4-201ENST00000513338 TOB2Q14106 344 aaPredicted RBP11.17□□□□□ -0.62
NCOA4P4-201ENST00000513338 LRRC24Q50LG9 513 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms