RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 RBM27Q9P2N5 1060 aaKnown RBP13.08□□□□□ -0.32
PTPN20-228ENST00000513266 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-228ENST00000513266 TAF1P21675 1872 aa13.08□□□□□ -0.32
PTPN20-228ENST00000513266 LAMB2P55268 1798 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 RGL2O15211 777 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 TM4SF4P48230 202 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 HLFQ16534 295 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 FMNL2Q96PY5 1086 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 UNC80Q8N2C7 3258 aa13.07□□□□□ -0.32
PTPN20-228ENST00000513266 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
PTPN20-228ENST00000513266 KIAA2012Q0VF49 1180 aa13.06□□□□□ -0.32
PTPN20-228ENST00000513266 OTOP1Q7RTM1 612 aa13.06□□□□□ -0.32
PTPN20-228ENST00000513266 DPF2Q92785 391 aa13.06□□□□□ -0.32
PTPN20-228ENST00000513266 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
PTPN20-228ENST00000513266 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
PTPN20-228ENST00000513266 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
PTPN20-228ENST00000513266 SCN9AQ15858 1988 aa13.05□□□□□ -0.32
PTPN20-228ENST00000513266 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
PTPN20-228ENST00000513266 KCNQ3O43525 872 aa13.05□□□□□ -0.32
PTPN20-228ENST00000513266 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
PTPN20-228ENST00000513266 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
PTPN20-228ENST00000513266 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
PTPN20-228ENST00000513266 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
PTPN20-228ENST00000513266 DUOX1Q9NRD9 1551 aa13.05□□□□□ -0.32
PTPN20-228ENST00000513266 ASTN2O75129 1339 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-228ENST00000513266 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
PTPN20-228ENST00000513266 HMOX1P09601 288 aa13.04□□□□□ -0.32
PTPN20-228ENST00000513266 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
PTPN20-228ENST00000513266 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
PTPN20-228ENST00000513266 MOB2Q70IA6 237 aa13.04□□□□□ -0.32
PTPN20-228ENST00000513266 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
PTPN20-228ENST00000513266 IL17REQ8NFR9 667 aa13.04□□□□□ -0.32
PTPN20-228ENST00000513266 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
PTPN20-228ENST00000513266 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
PTPN20-228ENST00000513266 LAMB1P07942 1786 aa13.03□□□□□ -0.32
PTPN20-228ENST00000513266 ANKRD36CQ5JPF3 1778 aa13.03□□□□□ -0.32
PTPN20-228ENST00000513266 PSMD14O00487 310 aa13.03□□□□□ -0.32
PTPN20-228ENST00000513266 FKBP1BP68106 108 aa13.03□□□□□ -0.32
PTPN20-228ENST00000513266 TEFQ10587 303 aa13.03□□□□□ -0.32
PTPN20-228ENST00000513266 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
PTPN20-228ENST00000513266 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
PTPN20-228ENST00000513266 DPP8Q6V1X1 898 aaPredicted RBP13.02□□□□□ -0.33
PTPN20-228ENST00000513266 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
PTPN20-228ENST00000513266 PRO3102Q9H379 93 aa13.02□□□□□ -0.33
PTPN20-228ENST00000513266 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.33
PTPN20-228ENST00000513266 LRRC37AA6NMS7 1700 aa13.02□□□□□ -0.33
PTPN20-228ENST00000513266 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
PTPN20-228ENST00000513266 KIF4BQ2VIQ3 1234 aa13.01□□□□□ -0.33
PTPN20-228ENST00000513266 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-228ENST00000513266 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
PTPN20-228ENST00000513266 ZNF609O15014 1411 aa13□□□□□ -0.33
PTPN20-228ENST00000513266 UBN2Q6ZU65 1347 aa13□□□□□ -0.33
PTPN20-228ENST00000513266 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
PTPN20-228ENST00000513266 MPNDQ8N594 471 aa13□□□□□ -0.33
PTPN20-228ENST00000513266 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
PTPN20-228ENST00000513266 ABCC4O15439 1325 aa12.99□□□□□ -0.33
PTPN20-228ENST00000513266 SOX1O00570 391 aaPredicted RBP12.99□□□□□ -0.33
PTPN20-228ENST00000513266 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
PTPN20-228ENST00000513266 PSME4Q14997 1843 aa12.99□□□□□ -0.33
PTPN20-228ENST00000513266 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
PTPN20-228ENST00000513266 RPS12P25398 132 aaKnown RBP12.98□□□□□ -0.33
PTPN20-228ENST00000513266 SREBF2Q12772 1141 aa12.98□□□□□ -0.33
PTPN20-228ENST00000513266 SUSD4Q5VX71 490 aa12.98□□□□□ -0.33
PTPN20-228ENST00000513266 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
PTPN20-228ENST00000513266 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
PTPN20-228ENST00000513266 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
PTPN20-228ENST00000513266 GPTP24298 496 aa12.97□□□□□ -0.33
PTPN20-228ENST00000513266 CAP1Q01518 475 aa12.97□□□□□ -0.33
PTPN20-228ENST00000513266 ANGEL2Q5VTE6 544 aaKnown RBP12.97□□□□□ -0.33
PTPN20-228ENST00000513266 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
PTPN20-228ENST00000513266 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
PTPN20-228ENST00000513266 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
PTPN20-228ENST00000513266 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
PTPN20-228ENST00000513266 NTSR2O95665 410 aa12.96□□□□□ -0.33
PTPN20-228ENST00000513266 SNRPA1P09661 255 aaKnown RBP12.96□□□□□ -0.33
PTPN20-228ENST00000513266 CD99L2Q8TCZ2 262 aa12.96□□□□□ -0.33
PTPN20-228ENST00000513266 DBNDD1Q9H9R9 158 aa12.96□□□□□ -0.33
PTPN20-228ENST00000513266 ERVV-1B6SEH8 477 aa12.95□□□□□ -0.34
PTPN20-228ENST00000513266 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
PTPN20-228ENST00000513266 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
PTPN20-228ENST00000513266 BBOX1O75936 387 aa12.94□□□□□ -0.34
PTPN20-228ENST00000513266 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
PTPN20-228ENST00000513266 SCARF1Q14162 830 aa12.94□□□□□ -0.34
PTPN20-228ENST00000513266 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
PTPN20-228ENST00000513266 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
PTPN20-228ENST00000513266 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
PTPN20-228ENST00000513266 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
PTPN20-228ENST00000513266 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
PTPN20-228ENST00000513266 VCANP13611 3396 aa12.93□□□□□ -0.34
PTPN20-228ENST00000513266 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
PTPN20-228ENST00000513266 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
PTPN20-228ENST00000513266 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
PTPN20-228ENST00000513266 WTIPA6NIX2 430 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-228ENST00000513266 ZNF280AP59817 542 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-228ENST00000513266 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
PTPN20-228ENST00000513266 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-228ENST00000513266 WASHC4Q2M389 1173 aa12.92□□□□□ -0.34
PTPN20-228ENST00000513266 SLC4A8Q2Y0W8 1093 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms