RNA–Protein interactions for RNA: ENST00000513156.5

PTPN20-226, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 913 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-226ENST00000513156 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
PTPN20-226ENST00000513156 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.29
PTPN20-226ENST00000513156 LAS1LQ9Y4W2 734 aaKnown RBP13.27□□□□□ -0.29
PTPN20-226ENST00000513156 COL6A3P12111 3177 aa13.27□□□□□ -0.29
PTPN20-226ENST00000513156 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.29
PTPN20-226ENST00000513156 HIRAP54198 1017 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-226ENST00000513156 ZNF521Q96K83 1311 aa13.26□□□□□ -0.29
PTPN20-226ENST00000513156 CSRNP1Q96S65 589 aa13.26□□□□□ -0.29
PTPN20-226ENST00000513156 MYH16Q9H6N6 1097 aa13.26□□□□□ -0.29
PTPN20-226ENST00000513156 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
PTPN20-226ENST00000513156 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-226ENST00000513156 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-226ENST00000513156 HTTP42858 3142 aa13.25□□□□□ -0.29
PTPN20-226ENST00000513156 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
PTPN20-226ENST00000513156 CDC37L1Q7L3B6 337 aa13.25□□□□□ -0.29
PTPN20-226ENST00000513156 POTEDQ86YR6 584 aa13.25□□□□□ -0.29
PTPN20-226ENST00000513156 SALL2Q9Y467 1007 aaPredicted RBP13.25□□□□□ -0.29
PTPN20-226ENST00000513156 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
PTPN20-226ENST00000513156 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
PTPN20-226ENST00000513156 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
PTPN20-226ENST00000513156 NPM2Q86SE8 214 aaKnown RBP13.24□□□□□ -0.29
PTPN20-226ENST00000513156 NBPF5PQ86XG9 351 aaPredicted RBP13.24□□□□□ -0.29
PTPN20-226ENST00000513156 LARGE2Q8N3Y3 721 aa13.24□□□□□ -0.29
PTPN20-226ENST00000513156 CCDC102AQ96A19 550 aa13.24□□□□□ -0.29
PTPN20-226ENST00000513156 E9PSI1 815 aa13.23□□□□□ -0.29
PTPN20-226ENST00000513156 FBXO46Q6PJ61 603 aaPredicted RBP13.23□□□□□ -0.29
PTPN20-226ENST00000513156 SLC51AQ86UW1 340 aa13.23□□□□□ -0.29
PTPN20-226ENST00000513156 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
PTPN20-226ENST00000513156 CENPFP49454 3210 aa13.23□□□□□ -0.29
PTPN20-226ENST00000513156 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
PTPN20-226ENST00000513156 ALDH1B1P30837 517 aa13.22□□□□□ -0.29
PTPN20-226ENST00000513156 GMPSP49915 693 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-226ENST00000513156 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-226ENST00000513156 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
PTPN20-226ENST00000513156 TRPM4Q8TD43 1214 aa13.22□□□□□ -0.29
PTPN20-226ENST00000513156 ZNF296Q8WUU4 475 aaPredicted RBP13.22□□□□□ -0.29
PTPN20-226ENST00000513156 HDAC9Q9UKV0 1011 aa13.22□□□□□ -0.29
PTPN20-226ENST00000513156 RGL2O15211 777 aa13.21□□□□□ -0.29
PTPN20-226ENST00000513156 A1BGP04217 495 aa13.21□□□□□ -0.29
PTPN20-226ENST00000513156 SLC10A3P09131 477 aa13.21□□□□□ -0.29
PTPN20-226ENST00000513156 CXCL9Q07325 125 aa13.21□□□□□ -0.29
PTPN20-226ENST00000513156 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
PTPN20-226ENST00000513156 NIM1KQ8IY84 436 aa13.21□□□□□ -0.29
PTPN20-226ENST00000513156 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
PTPN20-226ENST00000513156 BRCA2P51587 3418 aa13.21□□□□□ -0.3
PTPN20-226ENST00000513156 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
PTPN20-226ENST00000513156 CC2D2BQ6DHV5 1058 aa13.2□□□□□ -0.3
PTPN20-226ENST00000513156 SHTN1A0MZ66 631 aa13.19□□□□□ -0.3
PTPN20-226ENST00000513156 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
PTPN20-226ENST00000513156 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN20-226ENST00000513156 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
PTPN20-226ENST00000513156 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
PTPN20-226ENST00000513156 KDM3BQ7LBC6 1761 aa13.19□□□□□ -0.3
PTPN20-226ENST00000513156 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
PTPN20-226ENST00000513156 HDGFL1Q5TGJ6 251 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 CLEC4GQ6UXB4 293 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 C2orf69Q8N8R5 385 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 C8orf58Q8NAV2 365 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
PTPN20-226ENST00000513156 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
PTPN20-226ENST00000513156 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-226ENST00000513156 DBF4Q9UBU7 674 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-226ENST00000513156 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 PPIP5K2O43314 1243 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 CT47B1P0C2W7 299 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-226ENST00000513156 PDIA6Q15084 440 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 AOC3Q16853 763 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-226ENST00000513156 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
PTPN20-226ENST00000513156 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
PTPN20-226ENST00000513156 RANBP2P49792 3224 aaKnown RBP13.17□□□□□ -0.3
PTPN20-226ENST00000513156 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
PTPN20-226ENST00000513156 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
PTPN20-226ENST00000513156 VAMP4O75379 141 aa13.16□□□□□ -0.3
PTPN20-226ENST00000513156 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
PTPN20-226ENST00000513156 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
PTPN20-226ENST00000513156 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
PTPN20-226ENST00000513156 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
PTPN20-226ENST00000513156 FAM177BA6PVY3 158 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
PTPN20-226ENST00000513156 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 TSPYL6Q8N831 410 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 CNOT7Q9UIV1 285 aaKnown RBP13.15□□□□□ -0.3
PTPN20-226ENST00000513156 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 NUP98P52948 1817 aa13.15□□□□□ -0.3
PTPN20-226ENST00000513156 ADM5C9JUS6 153 aa13.14□□□□□ -0.31
PTPN20-226ENST00000513156 GPR25O00155 361 aa13.14□□□□□ -0.31
PTPN20-226ENST00000513156 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-226ENST00000513156 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
PTPN20-226ENST00000513156 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
PTPN20-226ENST00000513156 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms