RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 ZNF333Q96JL9 665 aa12.97□□□□□ -0.33
CLCN3-208ENST00000512813 ABCC12Q96J65 1359 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
CLCN3-208ENST00000512813 RGL2O15211 777 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 EGFRP00533 1210 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 TBC1D10BQ4KMP7 808 aaPredicted RBP12.96□□□□□ -0.33
CLCN3-208ENST00000512813 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 SULF1Q8IWU6 871 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
CLCN3-208ENST00000512813 RTFDC1Q9BY42 306 aaPredicted RBP12.96□□□□□ -0.33
CLCN3-208ENST00000512813 LAMB4A4D0S4 1761 aa12.96□□□□□ -0.34
CLCN3-208ENST00000512813 KDM3BQ7LBC6 1761 aa12.95□□□□□ -0.34
CLCN3-208ENST00000512813 A1BGP04217 495 aa12.95□□□□□ -0.34
CLCN3-208ENST00000512813 COL9A1P20849 921 aa12.95□□□□□ -0.34
CLCN3-208ENST00000512813 SUPT20HQ8NEM7 779 aa12.95□□□□□ -0.34
CLCN3-208ENST00000512813 RPGRQ92834 1020 aaKnown RBP12.95□□□□□ -0.34
CLCN3-208ENST00000512813 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLCN3-208ENST00000512813 KIAA2012Q0VF49 1180 aa12.94□□□□□ -0.34
CLCN3-208ENST00000512813 ZNF496Q96IT1 587 aaPredicted RBP12.94□□□□□ -0.34
CLCN3-208ENST00000512813 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
CLCN3-208ENST00000512813 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
CLCN3-208ENST00000512813 PRAMEF22A3QJZ6 481 aa12.93□□□□□ -0.34
CLCN3-208ENST00000512813 FAM177BA6PVY3 158 aa12.93□□□□□ -0.34
CLCN3-208ENST00000512813 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
CLCN3-208ENST00000512813 DEFB123Q8N688 67 aa12.93□□□□□ -0.34
CLCN3-208ENST00000512813 ERO1AQ96HE7 468 aa12.93□□□□□ -0.34
CLCN3-208ENST00000512813 GGA3Q9NZ52 723 aa12.93□□□□□ -0.34
CLCN3-208ENST00000512813 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
CLCN3-208ENST00000512813 GTF2E1P29083 439 aaPredicted RBP12.92□□□□□ -0.34
CLCN3-208ENST00000512813 PLA2G5P39877 138 aa12.92□□□□□ -0.34
CLCN3-208ENST00000512813 DPF3Q92784 378 aa12.92□□□□□ -0.34
CLCN3-208ENST00000512813 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
CLCN3-208ENST00000512813 SLC4A8Q2Y0W8 1093 aa12.91□□□□□ -0.34
CLCN3-208ENST00000512813 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
CLCN3-208ENST00000512813 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
CLCN3-208ENST00000512813 RPS12P25398 132 aaKnown RBP12.9□□□□□ -0.34
CLCN3-208ENST00000512813 KIF4BQ2VIQ3 1234 aa12.9□□□□□ -0.34
CLCN3-208ENST00000512813 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
CLCN3-208ENST00000512813 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
CLCN3-208ENST00000512813 TMX4Q9H1E5 349 aaPredicted RBP12.9□□□□□ -0.34
CLCN3-208ENST00000512813 EFCC1Q9HA90 598 aa12.9□□□□□ -0.34
CLCN3-208ENST00000512813 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
CLCN3-208ENST00000512813 MOB2Q70IA6 237 aa12.89□□□□□ -0.35
CLCN3-208ENST00000512813 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
CLCN3-208ENST00000512813 CD99L2Q8TCZ2 262 aa12.89□□□□□ -0.35
CLCN3-208ENST00000512813 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
CLCN3-208ENST00000512813 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-208ENST00000512813 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 PSMD14O00487 310 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
CLCN3-208ENST00000512813 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 RBM26Q5T8P6 1007 aaKnown RBP12.88□□□□□ -0.35
CLCN3-208ENST00000512813 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-208ENST00000512813 NUTM1Q86Y26 1132 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 MTMR10Q9NXD2 777 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 NR2E3Q9Y5X4 410 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-208ENST00000512813 DUOX1Q9NRD9 1551 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 SIPA1L3O60292 1781 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-208ENST00000512813 LAMB1P07942 1786 aa12.88□□□□□ -0.35
CLCN3-208ENST00000512813 ZBTB7BO15156 539 aaPredicted RBP12.87□□□□□ -0.35
CLCN3-208ENST00000512813 Q7L0L9 218 aa12.87□□□□□ -0.35
CLCN3-208ENST00000512813 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
CLCN3-208ENST00000512813 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
CLCN3-208ENST00000512813 MUC3AQ02505 3323 aa12.87□□□□□ -0.35
CLCN3-208ENST00000512813 DDX60Q8IY21 1712 aaKnown RBP12.86□□□□□ -0.35
CLCN3-208ENST00000512813 WTIPA6NIX2 430 aaPredicted RBP12.86□□□□□ -0.35
CLCN3-208ENST00000512813 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
CLCN3-208ENST00000512813 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
CLCN3-208ENST00000512813 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
CLCN3-208ENST00000512813 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
CLCN3-208ENST00000512813 CAP1Q01518 475 aa12.85□□□□□ -0.35
CLCN3-208ENST00000512813 ANGEL2Q5VTE6 544 aaKnown RBP12.85□□□□□ -0.35
CLCN3-208ENST00000512813 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
CLCN3-208ENST00000512813 FAM122AQ96E09 287 aa12.85□□□□□ -0.35
CLCN3-208ENST00000512813 ZNF646O15015 1829 aaPredicted RBP12.84□□□□□ -0.35
CLCN3-208ENST00000512813 INHBEP58166 350 aa12.84□□□□□ -0.35
CLCN3-208ENST00000512813 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
CLCN3-208ENST00000512813 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
CLCN3-208ENST00000512813 PTCH2Q9Y6C5 1203 aa12.84□□□□□ -0.35
CLCN3-208ENST00000512813 HLFQ16534 295 aa12.83□□□□□ -0.36
CLCN3-208ENST00000512813 SPRYD7Q5W111 196 aa12.83□□□□□ -0.36
CLCN3-208ENST00000512813 SP8Q8IXZ3 490 aa12.83□□□□□ -0.36
CLCN3-208ENST00000512813 RAPGEFL1Q9UHV5 662 aa12.83□□□□□ -0.36
CLCN3-208ENST00000512813 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
CLCN3-208ENST00000512813 MANSC4A6NHS7 340 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-208ENST00000512813 IGF2BP3O00425 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLCN3-208ENST00000512813 CDCA8Q53HL2 280 aa12.82□□□□□ -0.36
CLCN3-208ENST00000512813 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
CLCN3-208ENST00000512813 ABCC4O15439 1325 aa12.82□□□□□ -0.36
CLCN3-208ENST00000512813 LRRC37AA6NMS7 1700 aa12.82□□□□□ -0.36
CLCN3-208ENST00000512813 MYCP01106 439 aaPredicted RBP12.81□□□□□ -0.36
CLCN3-208ENST00000512813 SP3Q02447 781 aa12.81□□□□□ -0.36
CLCN3-208ENST00000512813 CRHR2Q13324 411 aa12.81□□□□□ -0.36
CLCN3-208ENST00000512813 NEUROD1Q13562 356 aa12.81□□□□□ -0.36
CLCN3-208ENST00000512813 SCARF1Q14162 830 aa12.81□□□□□ -0.36
CLCN3-208ENST00000512813 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
CLCN3-208ENST00000512813 USP16Q9Y5T5 823 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms