RNA–Protein interactions for RNA: ENST00000511891.5

COPS4-211, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-211ENST00000511891 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
COPS4-211ENST00000511891 ZNF541Q9H0D2 1346 aa12.82□□□□□ -0.36
COPS4-211ENST00000511891 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
COPS4-211ENST00000511891 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
COPS4-211ENST00000511891 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
COPS4-211ENST00000511891 SMC1BQ8NDV3 1235 aa12.81□□□□□ -0.36
COPS4-211ENST00000511891 ISCA1Q9BUE6 129 aa12.81□□□□□ -0.36
COPS4-211ENST00000511891 SALL2Q9Y467 1007 aaPredicted RBP12.81□□□□□ -0.36
COPS4-211ENST00000511891 WDR90Q96KV7 1748 aa12.81□□□□□ -0.36
COPS4-211ENST00000511891 ABCC4O15439 1325 aa12.81□□□□□ -0.36
COPS4-211ENST00000511891 RNF123Q5XPI4 1314 aa12.81□□□□□ -0.36
COPS4-211ENST00000511891 CC2D2BQ6DHV5 1058 aa12.8□□□□□ -0.36
COPS4-211ENST00000511891 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
COPS4-211ENST00000511891 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
COPS4-211ENST00000511891 PSMD1Q99460 953 aa12.8□□□□□ -0.36
COPS4-211ENST00000511891 LAMB2P55268 1798 aa12.79□□□□□ -0.36
COPS4-211ENST00000511891 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
COPS4-211ENST00000511891 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
COPS4-211ENST00000511891 CCDC27Q2M243 656 aa12.79□□□□□ -0.36
COPS4-211ENST00000511891 COL4A5P29400 1685 aa12.79□□□□□ -0.36
COPS4-211ENST00000511891 FZD9O00144 591 aa12.78□□□□□ -0.36
COPS4-211ENST00000511891 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
COPS4-211ENST00000511891 DNAJC5GQ8N7S2 189 aa12.78□□□□□ -0.36
COPS4-211ENST00000511891 ZNF579Q8NAF0 562 aaKnown RBP12.78□□□□□ -0.36
COPS4-211ENST00000511891 MYD88Q99836 296 aa12.78□□□□□ -0.36
COPS4-211ENST00000511891 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
COPS4-211ENST00000511891 CEP350Q5VT06 3117 aa12.77□□□□□ -0.36
COPS4-211ENST00000511891 DDX46Q7L014 1031 aaKnown RBP12.77□□□□□ -0.37
COPS4-211ENST00000511891 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
COPS4-211ENST00000511891 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
COPS4-211ENST00000511891 JARID2Q92833 1246 aaPredicted RBP12.77□□□□□ -0.37
COPS4-211ENST00000511891 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
COPS4-211ENST00000511891 TAF1P21675 1872 aa12.76□□□□□ -0.37
COPS4-211ENST00000511891 IRS4O14654 1257 aaPredicted RBP12.76□□□□□ -0.37
COPS4-211ENST00000511891 BBOX1O75936 387 aa12.76□□□□□ -0.37
COPS4-211ENST00000511891 TRIM28Q13263 835 aaKnown RBP12.76□□□□□ -0.37
COPS4-211ENST00000511891 GRAPQ13588 217 aa12.76□□□□□ -0.37
COPS4-211ENST00000511891 AOC3Q16853 763 aa12.76□□□□□ -0.37
COPS4-211ENST00000511891 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
COPS4-211ENST00000511891 GRAPLQ8TC17 118 aaPredicted RBP12.76□□□□□ -0.37
COPS4-211ENST00000511891 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
COPS4-211ENST00000511891 TAF1DQ9H5J8 278 aaPredicted RBP12.76□□□□□ -0.37
COPS4-211ENST00000511891 DDX60Q8IY21 1712 aaKnown RBP12.76□□□□□ -0.37
COPS4-211ENST00000511891 IQCA1LA6NCM1 817 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 PPIP5K2O43314 1243 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 IL16Q14005 1332 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 TWISTNBQ3B726 338 aaPredicted RBP12.75□□□□□ -0.37
COPS4-211ENST00000511891 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 G2E3Q7L622 706 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
COPS4-211ENST00000511891 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
COPS4-211ENST00000511891 FANCIQ9NVI1 1328 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
COPS4-211ENST00000511891 COL4A1P02462 1669 aa12.74□□□□□ -0.37
COPS4-211ENST00000511891 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
COPS4-211ENST00000511891 SF3B3Q15393 1217 aaKnown RBP12.74□□□□□ -0.37
COPS4-211ENST00000511891 EAPPQ56P03 285 aaPredicted RBP12.74□□□□□ -0.37
COPS4-211ENST00000511891 DPP8Q6V1X1 898 aaPredicted RBP12.74□□□□□ -0.37
COPS4-211ENST00000511891 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
COPS4-211ENST00000511891 MPNDQ8N594 471 aa12.74□□□□□ -0.37
COPS4-211ENST00000511891 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
COPS4-211ENST00000511891 METTL22Q9BUU2 404 aaPredicted RBP12.74□□□□□ -0.37
COPS4-211ENST00000511891 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
COPS4-211ENST00000511891 HACL1Q9UJ83 578 aa12.74□□□□□ -0.37
COPS4-211ENST00000511891 PI4KAP2A4QPH2 592 aa12.73□□□□□ -0.37
COPS4-211ENST00000511891 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
COPS4-211ENST00000511891 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
COPS4-211ENST00000511891 EPHX2P34913 555 aa12.73□□□□□ -0.37
COPS4-211ENST00000511891 GPC2Q8N158 579 aa12.73□□□□□ -0.37
COPS4-211ENST00000511891 PI4KAP1Q8N8J0 262 aa12.73□□□□□ -0.37
COPS4-211ENST00000511891 RTFDC1Q9BY42 306 aaPredicted RBP12.73□□□□□ -0.37
COPS4-211ENST00000511891 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
COPS4-211ENST00000511891 PCCAP05165 728 aaPredicted RBP12.72□□□□□ -0.37
COPS4-211ENST00000511891 IGKV5-2P06315 115 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
COPS4-211ENST00000511891 KSR2Q6VAB6 950 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 LDHDQ86WU2 507 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 CCDC191Q8NCU4 936 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 KLRG1Q96E93 195 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
COPS4-211ENST00000511891 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 SCN4AP35499 1836 aa12.72□□□□□ -0.37
COPS4-211ENST00000511891 EPS15P42566 896 aa12.71□□□□□ -0.37
COPS4-211ENST00000511891 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.37
COPS4-211ENST00000511891 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 POTEMA6NI47 508 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 VAMP4O75379 141 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 SCNN1DP51172 638 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
COPS4-211ENST00000511891 GPSM2P81274 684 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 CXCL9Q07325 125 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 KIAA2012Q0VF49 1180 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 TMC4Q7Z404 712 aa12.7□□□□□ -0.38
COPS4-211ENST00000511891 GPR101Q96P66 508 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms