RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 DPP8Q6V1X1 898 aaPredicted RBP15.42■□□□□ 0.06
RNF4-216ENST00000511859 SP8Q8IXZ3 490 aa15.42■□□□□ 0.06
RNF4-216ENST00000511859 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
RNF4-216ENST00000511859 MPNDQ8N594 471 aa15.42■□□□□ 0.06
RNF4-216ENST00000511859 TRPM4Q8TD43 1214 aa15.42■□□□□ 0.06
RNF4-216ENST00000511859 GBA2Q9HCG7 927 aaPredicted RBP15.42■□□□□ 0.06
RNF4-216ENST00000511859 NTSR2O95665 410 aa15.41■□□□□ 0.06
RNF4-216ENST00000511859 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
RNF4-216ENST00000511859 PARP10Q53GL7 1025 aa15.41■□□□□ 0.06
RNF4-216ENST00000511859 TTLL7Q6ZT98 887 aa15.41■□□□□ 0.06
RNF4-216ENST00000511859 CTU1Q7Z7A3 348 aaKnown RBP15.41■□□□□ 0.06
RNF4-216ENST00000511859 SLC51AQ86UW1 340 aa15.41■□□□□ 0.06
RNF4-216ENST00000511859 DPF2Q92785 391 aa15.41■□□□□ 0.06
RNF4-216ENST00000511859 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
RNF4-216ENST00000511859 PKN2Q16513 984 aaKnown RBP15.4■□□□□ 0.06
RNF4-216ENST00000511859 GIGYF2Q6Y7W6 1299 aaKnown RBP15.4■□□□□ 0.06
RNF4-216ENST00000511859 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
RNF4-216ENST00000511859 DCTN1Q14203 1278 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 C3orf67Q6ZVT6 689 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 KRT26Q7Z3Y9 468 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 MICALL2Q8IY33 904 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
RNF4-216ENST00000511859 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 ZBTB3Q9H5J0 574 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 LAMB4A4D0S4 1761 aa15.39■□□□□ 0.05
RNF4-216ENST00000511859 PNISRQ8TF01 805 aaKnown RBP15.38■□□□□ 0.05
RNF4-216ENST00000511859 DCPSQ96C86 337 aaKnown RBP15.38■□□□□ 0.05
RNF4-216ENST00000511859 CSRNP1Q96S65 589 aa15.38■□□□□ 0.05
RNF4-216ENST00000511859 ABCC4O15439 1325 aa15.38■□□□□ 0.05
RNF4-216ENST00000511859 MYL6BP14649 208 aa15.37■□□□□ 0.05
RNF4-216ENST00000511859 UTP14AQ9BVJ6 771 aaKnown RBP15.37■□□□□ 0.05
RNF4-216ENST00000511859 MIS18AQ9NYP9 233 aa15.37■□□□□ 0.05
RNF4-216ENST00000511859 SHTN1A0MZ66 631 aa15.36■□□□□ 0.05
RNF4-216ENST00000511859 YDJCA8MPS7 323 aa15.36■□□□□ 0.05
RNF4-216ENST00000511859 DLK2Q6UY11 383 aa15.36■□□□□ 0.05
RNF4-216ENST00000511859 SAMD7Q7Z3H4 446 aa15.36■□□□□ 0.05
RNF4-216ENST00000511859 HPS5Q9UPZ3 1129 aa15.36■□□□□ 0.05
RNF4-216ENST00000511859 SLC10A3P09131 477 aa15.36■□□□□ 0.05
RNF4-216ENST00000511859 U2AF1L5P0DN76 240 aaPredicted RBP15.36■□□□□ 0.05
RNF4-216ENST00000511859 U2AF1Q01081 240 aaKnown RBP eCLIP15.36■□□□□ 0.05
RNF4-216ENST00000511859 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
RNF4-216ENST00000511859 TMC4Q7Z404 712 aa15.36■□□□□ 0.05
RNF4-216ENST00000511859 RPS12P25398 132 aaKnown RBP15.35■□□□□ 0.05
RNF4-216ENST00000511859 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
RNF4-216ENST00000511859 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
RNF4-216ENST00000511859 ERBB4Q15303 1308 aa15.34■□□□□ 0.05
RNF4-216ENST00000511859 PSMD14O00487 310 aa15.34■□□□□ 0.05
RNF4-216ENST00000511859 EIF4A1P60842 406 aaKnown RBP15.34■□□□□ 0.05
RNF4-216ENST00000511859 TBC1D10BQ4KMP7 808 aaPredicted RBP15.34■□□□□ 0.05
RNF4-216ENST00000511859 MKI67P46013 3256 aaKnown RBP15.33■□□□□ 0.04
RNF4-216ENST00000511859 GRAPQ13588 217 aa15.33■□□□□ 0.04
RNF4-216ENST00000511859 CNGB1Q14028 1251 aaPredicted RBP15.33■□□□□ 0.04
RNF4-216ENST00000511859 WASHC4Q2M389 1173 aa15.33■□□□□ 0.04
RNF4-216ENST00000511859 SULF1Q8IWU6 871 aa15.33■□□□□ 0.04
RNF4-216ENST00000511859 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
RNF4-216ENST00000511859 HDAC9Q9UKV0 1011 aa15.33■□□□□ 0.04
RNF4-216ENST00000511859 ADM5C9JUS6 153 aa15.32■□□□□ 0.04
RNF4-216ENST00000511859 RBM26Q5T8P6 1007 aaKnown RBP15.32■□□□□ 0.04
RNF4-216ENST00000511859 EGFRP00533 1210 aa15.31■□□□□ 0.04
RNF4-216ENST00000511859 FKBP1BP68106 108 aa15.31■□□□□ 0.04
RNF4-216ENST00000511859 HSP90AB3PQ58FF7 597 aa15.31■□□□□ 0.04
RNF4-216ENST00000511859 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
RNF4-216ENST00000511859 LAMB2P55268 1798 aa15.3■□□□□ 0.04
RNF4-216ENST00000511859 KDM3BQ7LBC6 1761 aa15.3■□□□□ 0.04
RNF4-216ENST00000511859 TAF1P21675 1872 aa15.3■□□□□ 0.04
RNF4-216ENST00000511859 NEFMP07197 916 aa15.29■□□□□ 0.04
RNF4-216ENST00000511859 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
RNF4-216ENST00000511859 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
RNF4-216ENST00000511859 RASAL3Q86YV0 1011 aa15.29■□□□□ 0.04
RNF4-216ENST00000511859 ZNF296Q8WUU4 475 aaPredicted RBP15.29■□□□□ 0.04
RNF4-216ENST00000511859 DBNDD1Q9H9R9 158 aa15.29■□□□□ 0.04
RNF4-216ENST00000511859 NSFL1CQ9UNZ2 370 aaKnown RBP15.29■□□□□ 0.04
RNF4-216ENST00000511859 LRP10Q7Z4F1 713 aa15.28■□□□□ 0.04
RNF4-216ENST00000511859 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
RNF4-216ENST00000511859 CDCA5Q96FF9 252 aa15.28■□□□□ 0.04
RNF4-216ENST00000511859 TRMT112Q9UI30 125 aaKnown RBP15.28■□□□□ 0.04
RNF4-216ENST00000511859 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
RNF4-216ENST00000511859 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.04
RNF4-216ENST00000511859 RIMBP2O15034 1052 aa15.27■□□□□ 0.04
RNF4-216ENST00000511859 VIL1P09327 827 aaKnown RBP15.27■□□□□ 0.04
RNF4-216ENST00000511859 PDIA6Q15084 440 aa15.27■□□□□ 0.04
RNF4-216ENST00000511859 HABP4Q5JVS0 413 aaKnown RBP15.27■□□□□ 0.04
RNF4-216ENST00000511859 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
RNF4-216ENST00000511859 EYA3Q99504 573 aa15.27■□□□□ 0.04
RNF4-216ENST00000511859 GGA3Q9NZ52 723 aa15.27■□□□□ 0.04
RNF4-216ENST00000511859 C6orf229H3BNL8 230 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 ECE2O60344 883 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 TBC1D8O95759 1140 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 TM4SF4P48230 202 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
RNF4-216ENST00000511859 KCNQ5Q9NR82 932 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 POLLQ9UGP5 575 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 DUOX1Q9NRD9 1551 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 KIAA0100Q14667 2235 aaKnown RBP15.26■□□□□ 0.03
RNF4-216ENST00000511859 CENPFP49454 3210 aa15.26■□□□□ 0.03
RNF4-216ENST00000511859 GPR25O00155 361 aa15.25■□□□□ 0.03
RNF4-216ENST00000511859 TCIRG1Q13488 830 aa15.25■□□□□ 0.03
RNF4-216ENST00000511859 NECTIN2Q92692 538 aa15.25■□□□□ 0.03
RNF4-216ENST00000511859 LRRC37AA6NMS7 1700 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms