RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-215ENST00000511642 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
CCND3-215ENST00000511642 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
CCND3-215ENST00000511642 RNF20Q5VTR2 975 aa16.41■□□□□ 0.22
CCND3-215ENST00000511642 ELP1O95163 1332 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 UQCRHLA0A096LP55 91 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 UQCRHP07919 91 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 ATP5JP18859 108 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 ANKRD1Q15327 319 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 FERMT3Q86UX7 667 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 ZNF830Q96NB3 372 aaPredicted RBP16.4■□□□□ 0.22
CCND3-215ENST00000511642 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 RABL6Q3YEC7 729 aaPredicted RBP16.4■□□□□ 0.22
CCND3-215ENST00000511642 JARID2Q92833 1246 aaPredicted RBP16.4■□□□□ 0.22
CCND3-215ENST00000511642 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
CCND3-215ENST00000511642 GLI3P10071 1580 aa16.39■□□□□ 0.21
CCND3-215ENST00000511642 ABCC6O95255 1503 aa16.39■□□□□ 0.21
CCND3-215ENST00000511642 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
CCND3-215ENST00000511642 KRT85P78386 507 aa16.39■□□□□ 0.21
CCND3-215ENST00000511642 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
CCND3-215ENST00000511642 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
CCND3-215ENST00000511642 CHGBP05060 677 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
CCND3-215ENST00000511642 TFCP2Q12800 502 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 SASS6Q6UVJ0 657 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 ANKRD13DQ6ZTN6 518 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
CCND3-215ENST00000511642 ZNF609O15014 1411 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 LIG1P18858 919 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 PDCP20941 246 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 PDCL3Q9H2J4 239 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
CCND3-215ENST00000511642 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
CCND3-215ENST00000511642 NDUFB9Q9Y6M9 179 aa16.37■□□□□ 0.21
CCND3-215ENST00000511642 COL18A1P39060 1754 aa16.37■□□□□ 0.21
CCND3-215ENST00000511642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCND3-215ENST00000511642 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
CCND3-215ENST00000511642 CASP7P55210 303 aa16.36■□□□□ 0.21
CCND3-215ENST00000511642 RBM10P98175 930 aaKnown RBP16.36■□□□□ 0.21
CCND3-215ENST00000511642 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
CCND3-215ENST00000511642 ADAMTSL3P82987 1691 aa16.36■□□□□ 0.21
CCND3-215ENST00000511642 STK3Q13188 491 aa16.36■□□□□ 0.21
CCND3-215ENST00000511642 UBE3BQ7Z3V4 1068 aa16.36■□□□□ 0.21
CCND3-215ENST00000511642 IFNL2Q8IZJ0 200 aa16.36■□□□□ 0.21
CCND3-215ENST00000511642 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
CCND3-215ENST00000511642 CYP27B1O15528 508 aa16.35■□□□□ 0.21
CCND3-215ENST00000511642 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
CCND3-215ENST00000511642 GTF3C6Q969F1 213 aa16.35■□□□□ 0.21
CCND3-215ENST00000511642 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
CCND3-215ENST00000511642 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
CCND3-215ENST00000511642 CCDC192P0DO97 292 aa16.35■□□□□ 0.21
CCND3-215ENST00000511642 C17orf53Q8N3J3 647 aaPredicted RBP16.35■□□□□ 0.21
CCND3-215ENST00000511642 JAK2O60674 1132 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 KRT32Q14532 448 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 NOLC1Q14978 699 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCND3-215ENST00000511642 HAUS7Q99871 368 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 NUP62CLQ9H1M0 184 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 SPTLC3Q9NUV7 552 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 ATP5J2-PTCD1G3V325 749 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 DYNC1I1O14576 645 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 PTCD1O75127 700 aaKnown RBP16.34■□□□□ 0.21
CCND3-215ENST00000511642 PKD1L3Q7Z443 1732 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
CCND3-215ENST00000511642 LEO1Q8WVC0 666 aaPredicted RBP16.34■□□□□ 0.21
CCND3-215ENST00000511642 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
CCND3-215ENST00000511642 CYP21A2P08686 494 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 MAP3K11Q16584 847 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 SCAND2PQ9GZW5 306 aaPredicted RBP16.33■□□□□ 0.2
CCND3-215ENST00000511642 KCNF1Q9H3M0 494 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 CHMP3Q9Y3E7 222 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 PLEKHG2Q9H7P9 1386 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 RESTQ13127 1097 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 TTC5Q8N0Z6 440 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.2
CCND3-215ENST00000511642 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
CCND3-215ENST00000511642 TFIP11Q9UBB9 837 aaKnown RBP16.33■□□□□ 0.2
CCND3-215ENST00000511642 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
CCND3-215ENST00000511642 A0A087WZG4 1122 aa16.32■□□□□ 0.2
CCND3-215ENST00000511642 TYRO3Q06418 890 aa16.32■□□□□ 0.2
CCND3-215ENST00000511642 CAMK4Q16566 473 aa16.32■□□□□ 0.2
CCND3-215ENST00000511642 RBM43Q6ZSC3 357 aaKnown RBP16.32■□□□□ 0.2
CCND3-215ENST00000511642 STOX1Q6ZVD7 989 aa16.32■□□□□ 0.2
CCND3-215ENST00000511642 DDX17Q92841 729 aaKnown RBP16.32■□□□□ 0.2
CCND3-215ENST00000511642 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
CCND3-215ENST00000511642 DACT1Q9NYF0 836 aa16.32■□□□□ 0.2
CCND3-215ENST00000511642 FAM13BQ9NYF5 915 aa16.32■□□□□ 0.2
CCND3-215ENST00000511642 MCMDC2Q4G0Z9 681 aa16.31■□□□□ 0.2
CCND3-215ENST00000511642 Q6ZUG5 572 aa16.31■□□□□ 0.2
CCND3-215ENST00000511642 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
CCND3-215ENST00000511642 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
CCND3-215ENST00000511642 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
CCND3-215ENST00000511642 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
CCND3-215ENST00000511642 BRF1Q92994 677 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms