RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 FZD6O60353 706 aa5.87□□□□□ -1.47
TRAPPC11-207ENST00000511409 BMP4P12644 408 aa5.87□□□□□ -1.47
TRAPPC11-207ENST00000511409 SLCO4C1Q6ZQN7 724 aa5.87□□□□□ -1.47
TRAPPC11-207ENST00000511409 PIK3R5Q8WYR1 880 aa5.87□□□□□ -1.47
TRAPPC11-207ENST00000511409 MARK1Q9P0L2 795 aa5.87□□□□□ -1.47
TRAPPC11-207ENST00000511409 MKL2Q9ULH7 1088 aa5.87□□□□□ -1.47
TRAPPC11-207ENST00000511409 POLIQ9UNA4 740 aa5.87□□□□□ -1.47
TRAPPC11-207ENST00000511409 KRBA1A5PL33 1030 aa5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 ANKRD33BA6NCL7 494 aa5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 MZF1P28698 734 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 ARSDP51689 593 aa5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 C8orf34Q49A92 452 aa5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 CMTR1Q8N1G2 835 aaKnown RBP5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 RGS22Q8NE09 1264 aa5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 USP20Q9Y2K6 914 aa5.86□□□□□ -1.47
TRAPPC11-207ENST00000511409 DCDC2BA2VCK2 349 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 OPLAHO14841 1288 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 KHNYNO15037 678 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 PDGFAP04085 211 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 EPB42P16452 691 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 USP5P45974 858 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 ZNF468Q5VIY5 522 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 DNAJC14Q6Y2X3 702 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 NUDT16Q96DE0 195 aaKnown RBP5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 ASB16Q96NS5 453 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 PSMG3-AS1Q96PY0 264 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 KRTAP9-2Q9BYQ4 174 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 EFCC1Q9HA90 598 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 BRD7Q9NPI1 651 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 C11orf16Q9NQ32 467 aa5.85□□□□□ -1.47
TRAPPC11-207ENST00000511409 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 ERCC3P19447 782 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 COL8A1P27658 744 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 ADH6P28332 368 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 SNRPNP63162 240 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 TYRO3Q06418 890 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 PDE3BQ13370 1112 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 TMC7Q7Z402 723 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 CITED4Q96RK1 184 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 MDFIQ99750 246 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 RBCK1Q9BYM8 510 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 STRN4Q9NRL3 753 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 DMGDHQ9UI17 866 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 KLF15Q9UIH9 416 aa5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 RTCBQ9Y3I0 505 aaKnown RBP5.84□□□□□ -1.47
TRAPPC11-207ENST00000511409 SHISA8B8ZZ34 492 aa5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 RPLP1P05386 114 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 EPXP11678 715 aa5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 CD33P20138 364 aa5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 INPP5BP32019 993 aa5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 C1orf229Q6ZS94 237 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 EDARADDQ8WWZ3 215 aa5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 GGA1Q9UJY5 639 aa5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 FNDC3AQ9Y2H6 1198 aaKnown RBP5.83□□□□□ -1.48
TRAPPC11-207ENST00000511409 A6NHS1 94 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 UBAP1LF5GYI3 381 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 PIK3R2O00459 728 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 SIN3BO75182 1162 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 HOXB4P17483 251 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 SFSWAPQ12872 951 aaKnown RBP5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 DMRTB1Q96MA1 342 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 NIF3L1Q9GZT8 377 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 GGNBP2Q9H3C7 697 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 KCNH4Q9UQ05 1017 aa5.82□□□□□ -1.48
TRAPPC11-207ENST00000511409 ADARB2-AS1A8MUL3 147 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 XYLBO75191 536 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 PLCB3Q01970 1234 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 EHHADHQ08426 723 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 ZNF438Q7Z4V0 828 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 GJD3Q8N144 294 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 TNFRSF25Q93038 417 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 BCL2L13Q9BXK5 485 aa5.81□□□□□ -1.48
TRAPPC11-207ENST00000511409 KRTAP9-6A0A140TA67 174 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 NEURL1BA8MQ27 555 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 FURINP09958 794 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 MAPK8P45983 427 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 RBM25P49756 843 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 TRIP4Q15650 581 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 LINC00114Q6XXX2 140 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 KRT25Q7Z3Z0 450 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 FCHSD1Q86WN1 690 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 NPAS4Q8IUM7 802 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 BTBD6Q96KE9 485 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 PNMA5Q96PV4 448 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 FAM129BQ96TA1 746 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 PRR12Q9ULL5 1215 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 KCNMB2Q9Y691 235 aa5.8□□□□□ -1.48
TRAPPC11-207ENST00000511409 GPR182O15218 404 aa5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 TREHO43280 583 aa5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 SPEM2Q0P670 501 aa5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 NEUROD1Q13562 356 aa5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 EAPPQ56P03 285 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 NPM2Q86SE8 214 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 SYT9Q86SS6 491 aa5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 GIPC2Q8TF65 315 aa5.79□□□□□ -1.48
TRAPPC11-207ENST00000511409 ELOA3CA0A087WX78 387 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 ELOA3DA6NLF2 546 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 GNB5O14775 395 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 SASH3O75995 380 aa5.78□□□□□ -1.48
TRAPPC11-207ENST00000511409 NEFLP07196 543 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms